==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/RNA 12-APR-99 1QFQ . COMPND 2 MOLECULE: 36-MER N-TERMINAL PEPTIDE OF THE N PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE LAMBDA; . AUTHOR M.SCHAERPF,H.STICHT,P.ROESCH . 35 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3726.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 21 60.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 25.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 34.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 B D 0 0 170 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-160.8 9.6 -12.1 0.8 2 3 B A > + 0 0 70 3,-0.1 4,-3.0 2,-0.1 5,-0.1 0.653 360.0 56.5-114.1 -27.0 5.8 -12.2 1.1 3 4 B Q H > S+ 0 0 116 2,-0.3 4,-3.3 1,-0.2 5,-0.3 0.987 104.9 49.8 -71.1 -57.4 5.0 -8.6 1.9 4 5 B T H > S+ 0 0 81 1,-0.3 4,-0.9 2,-0.2 -1,-0.2 0.903 117.4 45.5 -47.9 -35.6 6.6 -7.0 -1.2 5 6 B R H >> S+ 0 0 148 1,-0.2 4,-1.2 2,-0.2 3,-1.0 0.940 108.2 54.4 -71.4 -46.7 4.5 -9.7 -2.9 6 7 B R H 3X S+ 0 0 67 -4,-3.0 4,-1.1 1,-0.3 3,-0.4 0.869 96.8 67.9 -56.8 -32.7 1.5 -8.9 -0.9 7 8 B R H >< S+ 0 0 96 -4,-3.3 3,-0.9 1,-0.3 4,-0.5 0.920 95.1 54.5 -55.5 -39.1 2.0 -5.2 -2.1 8 9 B E H X< S+ 0 0 159 -3,-1.0 3,-1.1 -4,-0.9 -1,-0.3 0.906 107.2 50.8 -62.1 -32.3 1.0 -6.5 -5.5 9 10 B R H >< S+ 0 0 170 -4,-1.2 3,-0.6 -3,-0.4 -1,-0.3 0.700 103.3 60.8 -75.6 -15.4 -2.1 -7.8 -3.8 10 11 B R T XX S+ 0 0 92 -4,-1.1 4,-4.6 -3,-0.9 3,-0.7 0.503 70.1 100.2 -89.1 -0.9 -2.4 -4.3 -2.3 11 12 B A H <> S+ 0 0 49 -3,-1.1 4,-3.3 -4,-0.5 5,-0.3 0.857 85.0 52.4 -52.7 -26.9 -2.7 -2.8 -5.9 12 13 B E H <> S+ 0 0 145 -3,-0.6 4,-1.1 2,-0.2 -1,-0.3 0.870 113.7 40.5 -76.5 -33.2 -6.5 -2.8 -4.9 13 14 B K H <> S+ 0 0 144 -3,-0.7 4,-2.1 -4,-0.3 -2,-0.2 0.860 120.8 45.6 -79.9 -33.9 -5.7 -1.0 -1.7 14 15 B Q H X S+ 0 0 68 -4,-4.6 4,-4.8 2,-0.2 5,-0.4 0.946 115.2 44.5 -72.6 -49.6 -3.2 1.2 -3.6 15 16 B A H X S+ 0 0 58 -4,-3.3 4,-1.3 -5,-0.4 -3,-0.2 0.831 116.9 47.9 -67.3 -26.1 -5.5 1.9 -6.6 16 17 B Q H X S+ 0 0 135 -4,-1.1 4,-0.7 -5,-0.3 -1,-0.2 0.888 119.7 38.5 -79.9 -36.4 -8.3 2.5 -4.1 17 18 B W H >< S+ 0 0 97 -4,-2.1 3,-1.0 2,-0.2 -2,-0.2 0.938 116.8 50.0 -75.4 -48.0 -6.1 4.8 -2.0 18 19 B K H >< S+ 0 0 110 -4,-4.8 3,-1.4 1,-0.3 -3,-0.2 0.883 104.4 60.5 -59.1 -35.3 -4.4 6.3 -5.1 19 20 B A H 3< S+ 0 0 77 -4,-1.3 -1,-0.3 -5,-0.4 -2,-0.2 0.847 118.5 29.1 -62.5 -29.6 -7.9 6.9 -6.5 20 21 B A T << S+ 0 0 69 -3,-1.0 -1,-0.3 -4,-0.7 -2,-0.2 0.032 120.8 55.4-118.9 28.5 -8.5 9.1 -3.4 21 22 B N X + 0 0 38 -3,-1.4 3,-0.5 2,-0.1 -1,-0.2 -0.130 50.4 133.0-153.5 49.8 -5.0 10.3 -2.8 22 23 B P G > S+ 0 0 32 0, 0.0 3,-2.2 0, 0.0 7,-0.2 0.797 72.2 70.0 -71.2 -26.1 -3.7 11.9 -5.9 23 24 B L G 3 S+ 0 0 111 1,-0.3 5,-0.1 4,-0.1 -2,-0.1 0.890 104.4 40.5 -58.0 -35.2 -2.5 14.7 -3.6 24 25 B L G < S+ 0 0 122 -3,-0.5 2,-0.3 -6,-0.1 -1,-0.3 -0.155 109.8 79.7-102.1 35.6 0.0 12.2 -2.3 25 26 B V S < S- 0 0 44 -3,-2.2 4,-0.2 1,-0.2 -1,-0.1 -0.868 110.2 -33.8-148.1 109.7 0.6 11.0 -5.9 26 27 B G S S- 0 0 59 -2,-0.3 3,-0.2 2,-0.1 -1,-0.2 0.888 81.5-105.0 42.6 97.5 2.8 12.8 -8.5 27 28 B V S S+ 0 0 133 1,-0.2 -4,-0.1 -3,-0.1 -3,-0.1 -0.080 107.0 25.9 -46.3 148.0 2.3 16.5 -7.6 28 29 B S S S+ 0 0 102 1,-0.1 -1,-0.2 -5,-0.1 -2,-0.1 0.942 92.3 115.4 60.0 45.8 0.1 18.3 -10.1 29 30 B A + 0 0 48 -4,-0.2 -1,-0.1 -7,-0.2 -2,-0.1 -0.283 31.9 126.2-139.7 51.4 -1.7 15.0 -10.9 30 31 B K - 0 0 126 -7,-0.1 -4,-0.0 -9,-0.0 -3,-0.0 -0.951 48.5-140.6-117.1 123.4 -5.3 15.5 -9.8 31 32 B P - 0 0 115 0, 0.0 2,-0.2 0, 0.0 -2,-0.1 -0.248 19.8-164.0 -73.6 165.2 -8.2 14.9 -12.2 32 33 B V - 0 0 105 -2,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.730 21.8-129.8-137.4-172.3 -11.3 17.1 -12.2 33 34 B N S S+ 0 0 164 -2,-0.2 0, 0.0 1,-0.1 0, 0.0 -0.383 70.3 94.9-143.8 62.8 -14.9 17.2 -13.5 34 35 B R 0 0 210 1,-0.1 -1,-0.1 0, 0.0 0, 0.0 -0.408 360.0 360.0-153.1 70.7 -15.6 20.4 -15.4 35 36 B P 0 0 196 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.712 360.0 360.0 -72.2 360.0 -15.1 20.1 -19.2