==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 07-JUL-07 2QJL . COMPND 2 MOLECULE: UBIQUITIN-RELATED MODIFIER 1; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR J.YU,C.Z.ZHOU . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5748.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 71 71.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 6.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 21.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 19 19.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 61 0, 0.0 2,-0.4 0, 0.0 26,-0.2 0.000 360.0 360.0 360.0 131.8 -14.1 20.0 -11.2 2 2 A V E -A 26 0A 2 24,-2.4 24,-3.1 26,-0.1 2,-0.5 -0.998 360.0-153.1-138.5 134.6 -11.2 17.8 -10.1 3 3 A N E +A 25 0A 74 -2,-0.4 84,-3.2 22,-0.2 85,-0.4 -0.924 27.0 157.4-108.7 125.3 -9.7 14.5 -11.4 4 4 A V E -A 24 0A 5 20,-2.4 20,-3.0 -2,-0.5 2,-0.4 -0.858 32.6-127.3-136.1 168.9 -8.0 12.1 -9.1 5 5 A K E -Ab 23 89A 96 83,-2.3 85,-2.5 -2,-0.3 2,-0.4 -0.966 15.9-160.2-118.8 143.0 -7.1 8.4 -8.9 6 6 A V E -Ab 22 90A 0 16,-2.4 16,-2.8 -2,-0.4 2,-0.5 -0.964 3.2-157.6-119.2 140.3 -7.9 6.0 -6.1 7 7 A E E -Ab 21 91A 52 83,-2.3 85,-2.7 -2,-0.4 2,-0.7 -0.976 4.0-155.5-120.1 128.2 -6.1 2.7 -5.5 8 8 A F E + b 0 92A 0 12,-2.8 5,-0.4 -2,-0.5 3,-0.2 -0.921 30.3 169.6-108.6 107.6 -7.8 -0.1 -3.5 9 9 A L E > + b 0 93A 40 83,-3.4 85,-1.8 -2,-0.7 3,-1.4 -0.549 43.6 46.3-120.6 172.6 -5.0 -2.2 -2.0 10 10 A G T 3 S- 0 0 49 83,-0.3 -1,-0.2 1,-0.2 83,-0.1 0.720 135.1 -49.7 63.4 21.1 -4.4 -5.0 0.5 11 11 A G T > S+ 0 0 41 -3,-0.2 3,-2.1 84,-0.0 -1,-0.2 0.294 106.2 123.2 103.0 -8.1 -7.3 -6.8 -1.1 12 12 A L G X + 0 0 5 -3,-1.4 3,-1.9 1,-0.3 4,-0.3 0.700 58.2 80.1 -58.2 -21.3 -9.9 -4.0 -1.0 13 13 A D G > >S+ 0 0 28 -5,-0.4 5,-2.3 1,-0.3 3,-1.9 0.759 73.6 79.7 -57.5 -21.4 -10.3 -4.4 -4.8 14 14 A A G < 5S+ 0 0 70 -3,-2.1 3,-0.4 1,-0.3 -1,-0.3 0.715 93.5 46.3 -60.2 -25.2 -12.6 -7.3 -4.0 15 15 A I G < 5S+ 0 0 13 -3,-1.9 32,-0.5 1,-0.2 33,-0.3 0.404 108.4 58.1 -96.1 -0.1 -15.4 -4.9 -3.2 16 16 A F T X 5S- 0 0 6 -3,-1.9 3,-1.6 -4,-0.3 -1,-0.2 -0.257 128.2 -87.4-121.4 40.8 -14.8 -2.9 -6.4 17 17 A G T 3 5S- 0 0 65 -3,-0.4 -3,-0.2 1,-0.3 3,-0.1 0.768 79.5 -65.0 61.8 28.8 -15.2 -5.7 -9.0 18 18 A K T 3 -E 83 0B 35 -2,-0.5 4,-2.0 50,-0.2 50,-0.2 -0.552 32.5-109.5-102.1 169.1 -12.0 17.2 0.1 34 34 A V H > S+ 0 0 0 48,-1.8 4,-2.8 45,-0.3 5,-0.2 0.864 122.0 59.2 -60.3 -34.2 -11.0 13.6 0.8 35 35 A G H > S+ 0 0 9 45,-2.4 4,-2.2 47,-0.2 -1,-0.2 0.917 105.6 47.5 -59.2 -43.5 -14.1 13.4 2.9 36 36 A D H > S+ 0 0 35 44,-0.3 4,-2.2 2,-0.2 -1,-0.2 0.900 110.2 53.0 -61.8 -41.6 -16.1 14.3 -0.2 37 37 A L H X S+ 0 0 0 -4,-2.0 4,-2.6 2,-0.2 -2,-0.2 0.921 108.2 49.4 -61.4 -45.1 -14.2 11.7 -2.2 38 38 A I H X S+ 0 0 2 -4,-2.8 4,-2.7 1,-0.2 5,-0.2 0.917 109.7 51.7 -60.4 -42.8 -15.0 9.0 0.4 39 39 A D H X S+ 0 0 78 -4,-2.2 4,-2.4 1,-0.2 -1,-0.2 0.894 110.6 49.7 -58.6 -41.4 -18.7 10.0 0.3 40 40 A H H X S+ 0 0 53 -4,-2.2 4,-2.2 2,-0.2 5,-0.5 0.914 109.8 49.7 -63.9 -45.9 -18.5 9.6 -3.5 41 41 A I H X>S+ 0 0 0 -4,-2.6 4,-2.4 1,-0.2 5,-0.8 0.948 114.8 44.5 -58.8 -48.9 -16.9 6.2 -3.3 42 42 A V H <5S+ 0 0 34 -4,-2.7 4,-0.4 1,-0.2 -2,-0.2 0.906 117.5 43.6 -62.6 -42.9 -19.5 4.9 -0.9 43 43 A S H <5S+ 0 0 92 -4,-2.4 -1,-0.2 -5,-0.2 -2,-0.2 0.773 132.6 13.8 -78.2 -25.3 -22.5 6.4 -2.7 44 44 A T H <5S+ 0 0 77 -4,-2.2 -3,-0.2 -5,-0.2 -2,-0.2 0.596 122.1 47.6-126.8 -16.8 -21.5 5.4 -6.3 45 45 A M T <5S+ 0 0 28 -4,-2.4 2,-0.8 -5,-0.5 -3,-0.2 0.541 85.4 81.5-114.0 -10.8 -18.7 2.9 -6.4 46 46 A I < - 0 0 15 -5,-0.8 -30,-0.1 -4,-0.4 -1,-0.1 -0.873 58.6-171.2 -99.0 102.9 -19.6 0.1 -4.0 47 47 A N S S+ 0 0 139 -2,-0.8 -1,-0.1 -32,-0.5 -31,-0.1 0.644 71.7 51.2 -79.7 -17.4 -22.0 -2.0 -6.0 48 48 A N S > S- 0 0 73 -33,-0.3 3,-2.5 1,-0.1 4,-0.3 -0.972 73.3-152.4-115.7 112.7 -23.2 -4.3 -3.3 49 49 A P G > S+ 0 0 101 0, 0.0 3,-1.4 0, 0.0 4,-0.4 0.751 92.1 71.3 -56.5 -23.7 -24.3 -2.3 -0.2 50 50 A N G 3 S+ 0 0 131 1,-0.3 3,-0.2 2,-0.1 4,-0.0 0.670 94.7 56.1 -63.8 -15.9 -23.4 -5.3 2.0 51 51 A D G X> S+ 0 0 42 -3,-2.5 3,-1.7 1,-0.2 4,-0.6 0.501 79.2 90.2 -92.6 -8.5 -19.7 -4.5 1.3 52 52 A V H X> S+ 0 0 33 -3,-1.4 4,-2.8 -4,-0.3 3,-1.8 0.889 80.6 60.3 -56.9 -38.8 -19.9 -0.8 2.5 53 53 A S H 34 S+ 0 0 81 -4,-0.4 -1,-0.3 1,-0.3 -2,-0.1 0.647 95.1 64.0 -65.7 -15.8 -18.9 -1.9 6.0 54 54 A I H <4 S+ 0 0 64 -3,-1.7 -1,-0.3 1,-0.1 -2,-0.2 0.719 115.0 30.6 -75.7 -21.3 -15.7 -3.3 4.5 55 55 A F H << S+ 0 0 0 -3,-1.8 7,-2.6 -4,-0.6 2,-0.3 0.777 127.8 24.6-105.7 -38.5 -14.7 0.3 3.6 56 56 A I E < -F 61 0C 16 -4,-2.8 2,-0.4 5,-0.3 -1,-0.3 -0.976 53.0-167.2-133.6 146.2 -16.4 2.5 6.2 57 57 A E E > S-F 60 0C 114 3,-3.0 3,-1.4 -2,-0.3 -4,-0.0 -0.999 83.4 -9.2-128.0 126.9 -17.6 2.1 9.8 58 58 A D T 3 S- 0 0 151 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.922 129.9 -57.3 53.6 46.4 -19.8 4.7 11.5 59 59 A D T 3 S+ 0 0 101 1,-0.2 2,-0.3 -3,-0.1 -1,-0.3 0.713 120.8 100.2 51.5 29.7 -19.2 7.0 8.4 60 60 A S E < S-F 57 0C 62 -3,-1.4 -3,-3.0 -22,-0.0 -1,-0.2 -0.952 90.4 -76.7-130.8 156.7 -15.4 6.9 8.9 61 61 A I E -F 56 0C 23 -2,-0.3 -5,-0.3 -5,-0.2 3,-0.1 -0.244 65.2 -97.0 -50.2 132.0 -12.7 4.9 7.1 62 62 A R > - 0 0 52 -7,-2.6 3,-1.7 1,-0.1 -1,-0.1 -0.274 39.8-102.0 -57.2 133.5 -12.9 1.4 8.5 63 63 A P T 3 S+ 0 0 76 0, 0.0 36,-0.1 0, 0.0 -1,-0.1 -0.348 112.2 42.7 -50.6 130.7 -10.3 0.6 11.2 64 64 A G T 3 S+ 0 0 12 1,-0.3 31,-3.0 -3,-0.1 2,-0.5 0.376 88.5 107.7 105.1 -3.0 -7.6 -1.4 9.5 65 65 A I E < -C 94 0A 2 -3,-1.7 2,-0.4 29,-0.2 -1,-0.3 -0.950 55.7-152.4-109.4 126.4 -7.4 0.7 6.3 66 66 A I E -C 93 0A 38 27,-2.7 27,-2.4 -2,-0.5 2,-0.5 -0.834 9.3-153.8 -94.5 133.0 -4.4 3.0 5.8 67 67 A T E -C 92 0A 1 -2,-0.4 7,-2.2 25,-0.2 2,-0.4 -0.936 11.2-174.0-113.5 120.8 -5.0 6.1 3.7 68 68 A L E -CD 91 73A 41 23,-2.4 23,-2.5 -2,-0.5 2,-0.6 -0.949 11.8-157.4-114.4 136.5 -2.1 7.7 1.8 69 69 A I E > S-CD 90 72A 1 3,-2.9 3,-1.0 -2,-0.4 21,-0.2 -0.963 84.1 -20.2-112.2 116.0 -2.4 10.9 -0.1 70 70 A N T 3 S- 0 0 60 19,-3.2 -1,-0.2 -2,-0.6 20,-0.1 0.941 130.7 -49.0 42.7 56.4 0.3 11.1 -2.8 71 71 A D T 3 S+ 0 0 143 18,-0.3 2,-0.4 -3,-0.2 -1,-0.2 0.597 118.2 114.6 69.2 16.6 2.4 8.5 -1.0 72 72 A T E < S-D 69 0A 46 -3,-1.0 -3,-2.9 2,-0.0 -1,-0.2 -0.956 78.4-101.7-125.7 132.3 2.0 10.3 2.4 73 73 A D E > -D 68 0A 83 -2,-0.4 3,-2.0 -5,-0.2 4,-0.3 -0.250 35.6-129.6 -47.4 127.6 0.2 9.2 5.6 74 74 A W G > >S+ 0 0 20 -7,-2.2 5,-2.9 1,-0.3 3,-1.7 0.707 100.7 74.2 -66.9 -16.5 -3.0 11.2 5.4 75 75 A E G > 5S+ 0 0 89 1,-0.3 3,-0.8 -8,-0.2 -1,-0.3 0.831 92.3 56.9 -57.0 -34.5 -2.5 12.5 9.0 76 76 A L G < 5S+ 0 0 132 -3,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.577 110.0 44.4 -76.6 -8.3 0.1 14.8 7.6 77 77 A E G < 5S- 0 0 78 -3,-1.7 -1,-0.2 -4,-0.3 -2,-0.2 0.297 125.5 -91.7-117.9 3.4 -2.4 16.3 5.1 78 78 A G T X 5 - 0 0 35 -3,-0.8 3,-2.4 -4,-0.4 -3,-0.2 0.576 50.2-123.4 94.1 12.5 -5.4 16.8 7.4 79 79 A E G > - 0 0 133 -54,-0.1 3,-2.2 -83,-0.0 -83,-0.1 -0.928 39.8 -82.8-119.1 148.3 -5.9 18.9 -6.6 86 86 A D T 3 S+ 0 0 108 -2,-0.3 -82,-0.2 1,-0.3 -84,-0.0 -0.222 116.9 21.2 -46.5 129.2 -6.0 17.6 -10.2 87 87 A G T 3 S+ 0 0 58 -84,-3.2 -1,-0.3 1,-0.3 -83,-0.2 0.363 85.4 147.4 90.6 -4.3 -3.8 14.5 -10.5 88 88 A D < - 0 0 10 -3,-2.2 -83,-2.3 -85,-0.4 2,-0.4 -0.285 36.0-147.9 -60.8 149.8 -3.8 13.6 -6.8 89 89 A I E -b 5 0A 59 -85,-0.2 -19,-3.2 2,-0.0 2,-0.5 -0.994 12.3-171.8-124.4 125.6 -3.6 9.8 -6.0 90 90 A I E -bC 6 69A 0 -85,-2.5 -83,-2.3 -2,-0.4 2,-0.4 -0.973 5.9-166.7-117.7 126.5 -5.2 8.5 -2.9 91 91 A S E -bC 7 68A 6 -23,-2.5 -23,-2.4 -2,-0.5 2,-0.5 -0.916 9.4-160.8-117.2 146.5 -4.6 4.9 -1.8 92 92 A F E -bC 8 67A 0 -85,-2.7 -83,-3.4 -2,-0.4 2,-0.5 -0.995 11.1-170.7-123.0 122.1 -6.5 2.7 0.7 93 93 A T E -bC 9 66A 38 -27,-2.4 -27,-2.7 -2,-0.5 2,-0.4 -0.962 14.9-144.9-120.3 119.2 -4.7 -0.4 2.0 94 94 A S E + C 0 65A 34 -85,-1.8 2,-0.3 -2,-0.5 -29,-0.2 -0.678 40.2 143.9 -79.5 127.8 -6.4 -3.0 4.2 95 95 A T > - 0 0 40 -31,-3.0 3,-2.3 -2,-0.4 -2,-0.1 -0.969 62.2-118.2-163.1 147.1 -3.9 -4.4 6.8 96 96 A L T 3 S+ 0 0 158 -2,-0.3 -31,-0.1 1,-0.3 -1,-0.1 0.721 117.6 58.3 -59.4 -20.6 -3.8 -5.6 10.4 97 97 A H T 3 S+ 0 0 152 -33,-0.1 -1,-0.3 -3,-0.0 -32,-0.1 0.487 86.2 126.6 -83.8 -3.0 -1.4 -2.7 11.0 98 98 A G < 0 0 19 -3,-2.3 -32,-0.1 -34,-0.3 -33,-0.1 -0.227 360.0 360.0 -72.9 144.2 -3.9 -0.2 9.8 99 99 A G 0 0 75 -36,-0.1 -1,-0.2 -35,-0.1 -33,-0.1 0.080 360.0 360.0-155.8 360.0 -5.2 2.8 11.6