==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRUS 20-AUG-99 1QL1 . COMPND 2 MOLECULE: PF1 BACTERIOPHAGE COAT PROTEIN B; . SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PHAGE PF1; . AUTHOR L.C.WELSH,M.F.SYMMONS,D.A.MARVIN . 46 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4294.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48104.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 26.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 76.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 162.2 4.9 -26.2 45.8 2 2 A V - 0 0 124 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.852 360.0 -90.0 179.5-154.3 4.3 -25.2 42.2 3 3 A I - 0 0 131 -2,-0.3 2,-1.7 2,-0.0 0, 0.0 -0.979 29.5-129.7-153.7 120.1 1.1 -24.1 40.3 4 4 A D + 0 0 130 -2,-0.4 2,-0.3 1,-0.1 3,-0.2 -0.633 41.3 156.4 -79.8 83.6 -1.1 -26.6 38.7 5 5 A T > + 0 0 58 -2,-1.7 4,-1.0 1,-0.2 -1,-0.1 -0.377 33.1 128.7 -99.6 52.7 -1.5 -25.3 35.2 6 6 A S H > S+ 0 0 75 -2,-0.3 4,-1.1 2,-0.2 3,-0.4 0.996 78.0 24.3 -75.2 -59.7 -2.3 -28.8 34.2 7 7 A A H > S+ 0 0 69 -3,-0.2 4,-2.7 1,-0.2 -1,-0.1 0.827 117.5 65.2 -76.1 -30.0 -5.6 -28.4 32.3 8 8 A V H > S+ 0 0 89 -4,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.820 96.6 57.5 -68.9 -22.0 -4.7 -24.8 31.6 9 9 A E H >X S+ 0 0 129 -4,-1.0 3,-1.7 -3,-0.4 4,-0.6 1.000 113.6 36.6 -64.7 -59.9 -1.9 -26.0 29.4 10 10 A S H >X S+ 0 0 69 -4,-1.1 4,-1.0 1,-0.3 3,-0.8 0.798 105.4 72.1 -66.0 -23.6 -4.1 -28.0 27.2 11 11 A A H >X S+ 0 0 35 -4,-2.7 4,-1.2 1,-0.2 3,-0.9 0.887 86.0 66.1 -55.7 -34.8 -6.7 -25.3 27.6 12 12 A I H X S+ 0 0 30 -4,-1.2 4,-1.9 -3,-0.5 3,-0.5 0.903 107.9 67.3 -67.2 -40.2 -8.8 -21.7 21.7 16 16 A Q H 3X S+ 0 0 84 -4,-2.0 4,-2.4 1,-0.3 5,-0.3 0.863 93.4 56.8 -48.0 -45.3 -6.2 -22.6 19.1 17 17 A G H 3X S+ 0 0 28 -4,-2.0 4,-3.1 1,-0.3 -1,-0.3 0.954 106.6 50.9 -54.9 -42.9 -8.6 -24.7 17.1 18 18 A D H X S+ 0 0 101 -4,-2.8 4,-1.6 1,-0.2 3,-1.0 0.912 102.7 63.7 -55.9 -42.1 -11.7 -18.7 11.6 23 23 A G H 3X S+ 0 0 25 -4,-1.0 4,-3.4 -5,-0.3 5,-0.4 0.895 93.5 59.5 -49.6 -47.9 -8.9 -18.3 9.1 24 24 A G H 3X S+ 0 0 48 -4,-1.1 4,-1.9 -3,-0.4 -1,-0.2 0.860 107.0 47.3 -50.1 -39.1 -10.4 -20.8 6.6 25 25 A Y H X S+ 0 0 90 -4,-1.6 4,-3.5 2,-0.2 3,-1.1 0.965 115.1 50.0 -68.1 -48.1 -11.9 -15.4 5.8 27 27 A V H 3X S+ 0 0 83 -4,-3.4 4,-2.0 1,-0.3 -2,-0.2 0.840 106.1 57.5 -60.6 -30.4 -9.4 -16.9 3.4 28 28 A G H 3< S+ 0 0 47 -4,-1.9 4,-0.4 -5,-0.4 -1,-0.3 0.814 110.4 43.0 -66.7 -31.4 -12.3 -18.4 1.6 29 29 A A H XX S+ 0 0 50 -4,-1.2 3,-2.0 -3,-1.1 4,-0.7 0.910 106.9 61.2 -80.0 -40.2 -13.7 -14.9 1.1 30 30 A L H >X S+ 0 0 89 -4,-3.5 3,-1.7 1,-0.3 4,-0.8 0.914 92.4 68.1 -47.2 -45.0 -10.2 -13.6 0.2 31 31 A V H >X S+ 0 0 82 -4,-2.0 4,-1.1 1,-0.3 3,-0.7 0.767 87.9 64.8 -49.2 -31.1 -10.3 -16.0 -2.7 32 32 A I H X> S+ 0 0 110 -3,-2.0 4,-3.3 -4,-0.4 3,-0.8 0.921 97.1 56.0 -59.6 -40.6 -13.0 -13.9 -4.4 33 33 A L H S+ 0 0 126 -3,-0.6 4,-3.0 -4,-0.4 -2,-0.2 0.844 115.4 50.3 -81.1 -26.9 -8.4 -11.7 -12.6 39 39 A I H X S+ 0 0 86 -4,-3.0 4,-2.7 2,-0.2 -2,-0.2 0.918 106.5 55.0 -67.5 -41.2 -11.9 -11.4 -14.0 40 40 A Y H < S+ 0 0 162 -4,-3.4 -2,-0.2 1,-0.2 4,-0.2 0.875 118.1 36.2 -56.7 -40.1 -11.6 -7.6 -13.8 41 41 A S H >X S+ 0 0 50 -4,-1.7 4,-3.3 -5,-0.2 3,-1.5 0.881 109.6 64.9 -83.4 -37.5 -8.5 -8.0 -15.9 42 42 A M H 3X S+ 0 0 111 -4,-3.0 4,-3.2 1,-0.3 -2,-0.2 0.948 100.1 50.4 -50.0 -56.2 -9.9 -10.8 -18.0 43 43 A L H 3< S+ 0 0 150 -4,-2.7 -1,-0.3 1,-0.2 -2,-0.2 0.515 118.1 38.7 -63.3 -19.7 -12.6 -8.7 -19.5 44 44 A R H <4 S+ 0 0 162 -3,-1.5 -1,-0.2 -4,-0.2 -2,-0.2 0.764 126.0 35.3 -87.1 -47.9 -10.1 -6.0 -20.5 45 45 A K H < 0 0 189 -4,-3.3 -2,-0.2 -5,-0.1 -3,-0.2 0.893 360.0 360.0 -70.9 -53.7 -7.2 -8.3 -21.6 46 46 A A < 0 0 113 -4,-3.2 0, 0.0 -5,-0.4 0, 0.0 -0.323 360.0 360.0 -84.5 360.0 -9.1 -11.3 -23.1