==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 04-SEP-03 1QX9 . COMPND 2 MOLECULE: INDOLICIDIN DERIVATIVE; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.ROZEK,J.P.POWERS,C.L.FRIEDRICH,R.E.HANCOCK . 15 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2077.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 2 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 203 0, 0.0 2,-0.2 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 165.1 -2.8 9.7 -2.5 2 2 A a - 0 0 46 1,-0.1 2,-0.7 2,-0.0 12,-0.1 -0.547 360.0 -88.1 -92.6 159.9 -0.7 6.9 -1.1 3 3 A L + 0 0 50 -2,-0.2 -1,-0.1 9,-0.2 11,-0.0 -0.523 62.1 146.1 -69.4 110.2 -1.3 3.2 -1.6 4 4 A K + 0 0 179 -2,-0.7 2,-0.2 10,-0.1 -1,-0.2 0.019 43.8 91.0-134.1 27.1 -3.7 2.2 1.2 5 5 A K + 0 0 109 1,-0.1 4,-0.1 2,-0.0 -2,-0.0 -0.696 59.6 48.4-117.5 171.9 -5.7 -0.5 -0.5 6 6 A W > - 0 0 128 -2,-0.2 3,-1.0 1,-0.1 -1,-0.1 0.893 63.2-141.3 61.4 100.1 -5.4 -4.2 -0.9 7 7 A P T 3 S+ 0 0 139 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.505 99.6 55.0 -69.4 -2.9 -4.8 -5.8 2.5 8 8 A W T 3 S+ 0 0 188 0, 0.0 -2,-0.1 0, 0.0 -3,-0.0 -0.205 74.2 142.5-123.9 44.0 -2.3 -8.2 0.8 9 9 A W < - 0 0 83 -3,-1.0 -3,-0.0 1,-0.2 0, 0.0 -0.715 39.5-154.9 -89.2 135.0 0.0 -5.7 -1.0 10 10 A P S S+ 0 0 71 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.975 78.1 40.0 -71.6 -58.4 3.7 -6.7 -1.1 11 11 A W + 0 0 178 1,-0.1 2,-0.2 2,-0.0 -2,-0.0 -0.098 63.3 141.5 -80.5-173.7 5.2 -3.1 -1.5 12 12 A R + 0 0 183 1,-0.1 -9,-0.2 2,-0.0 -1,-0.1 -0.605 18.3 175.8 177.1-111.6 4.0 -0.0 0.4 13 13 A R + 0 0 216 -2,-0.2 -10,-0.1 -11,-0.1 -1,-0.1 0.978 38.0 140.7 76.3 62.6 6.0 2.9 1.9 14 14 A a 0 0 63 -12,-0.1 -10,-0.1 -11,-0.0 -2,-0.0 0.190 360.0 360.0-106.8-133.2 3.1 5.1 3.0 15 15 A K 0 0 241 -2,-0.0 0, 0.0 -13,-0.0 0, 0.0 0.866 360.0 360.0 -38.7 360.0 2.7 7.2 6.2