==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER NEUROPEPTIDE 19-SEP-03 1R02 . COMPND 2 MOLECULE: OREXIN-A; . SOURCE 2 SYNTHETIC: YES; . AUTHOR H.-Y.KIM,E.HONG,J.-I.KIM,W.LEE . 33 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3400.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 21 63.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 15.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 36.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A Q 0 0 198 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -45.3 5.9 21.0 1.5 2 2 A P - 0 0 88 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.751 360.0-158.1 -52.1 -24.1 4.3 18.4 -0.8 3 3 A L - 0 0 132 2,-0.1 3,-0.2 6,-0.0 6,-0.0 0.281 43.9 -23.0 60.0 163.1 7.2 16.1 0.2 4 4 A P S S- 0 0 102 0, 0.0 2,-0.9 0, 0.0 5,-0.1 -0.082 85.9 -94.3 -41.6 126.3 8.3 13.1 -1.9 5 5 A D - 0 0 127 1,-0.2 2,-1.2 3,-0.1 -2,-0.1 -0.235 48.3-176.6 -49.5 90.6 5.4 12.0 -4.2 6 6 A a > - 0 0 34 -2,-0.9 6,-1.5 -3,-0.2 4,-1.2 -0.491 69.4 -55.8 -93.1 63.8 3.9 9.3 -1.9 7 7 A b T >4 S- 0 0 55 -2,-1.2 3,-0.9 2,-0.2 6,-0.2 1.000 120.6 -25.2 62.7 72.5 1.2 8.2 -4.3 8 8 A R T 34 S- 0 0 179 1,-0.2 -1,-0.2 2,-0.1 -3,-0.1 0.766 113.4 -72.4 64.9 25.5 -0.6 11.5 -5.0 9 9 A Q T 34 S+ 0 0 117 1,-0.1 -1,-0.2 -5,-0.1 -2,-0.2 0.871 90.3 148.0 57.5 37.8 0.6 12.7 -1.6 10 10 A K S << S- 0 0 130 -4,-1.2 3,-0.2 -3,-0.9 -1,-0.1 0.065 80.9 -89.1 -90.3 24.5 -1.8 10.4 0.1 11 11 A T S S- 0 0 127 1,-0.2 -4,-0.1 2,-0.1 -3,-0.1 0.665 74.7 -69.2 76.9 17.6 0.6 9.9 3.0 12 12 A a S > S+ 0 0 32 -6,-1.5 3,-2.1 -5,-0.1 4,-0.3 0.904 75.8 166.0 67.0 42.9 2.2 7.0 1.2 13 13 A S T >> + 0 0 42 -7,-0.5 4,-1.4 1,-0.3 3,-1.2 0.763 65.5 76.8 -59.8 -24.5 -0.9 4.8 1.6 14 14 A b H 3> S+ 0 0 42 1,-0.3 4,-1.6 -8,-0.2 -1,-0.3 0.762 77.4 75.8 -58.0 -24.7 0.8 2.5 -1.0 15 15 A R H <> S+ 0 0 123 -3,-2.1 4,-1.5 1,-0.2 -1,-0.3 0.916 100.8 38.9 -53.3 -46.9 3.0 1.3 1.8 16 16 A L H <> S+ 0 0 119 -3,-1.2 4,-1.0 -4,-0.3 -1,-0.2 0.887 116.5 50.7 -71.2 -39.9 0.2 -0.8 3.2 17 17 A Y H X S+ 0 0 167 -4,-1.4 4,-1.0 1,-0.2 5,-0.2 0.627 106.4 60.1 -72.7 -12.9 -1.0 -1.8 -0.2 18 18 A E H X>S+ 0 0 81 -4,-1.6 4,-3.7 -5,-0.2 5,-0.7 0.954 107.4 39.0 -78.6 -55.3 2.6 -2.8 -1.0 19 19 A L H <5S+ 0 0 109 -4,-1.5 -2,-0.2 3,-0.2 -1,-0.1 0.689 115.0 58.3 -68.3 -17.9 3.1 -5.5 1.7 20 20 A L H <5S+ 0 0 96 -4,-1.0 -1,-0.2 -5,-0.2 -2,-0.2 0.835 121.4 22.6 -80.2 -35.0 -0.5 -6.6 1.0 21 21 A H H <5S+ 0 0 150 -4,-1.0 -2,-0.2 -3,-0.3 -3,-0.2 0.815 135.2 34.6 -98.6 -41.5 0.1 -7.3 -2.7 22 22 A G T <5S+ 0 0 57 -4,-3.7 -3,-0.2 -5,-0.2 -2,-0.1 0.979 137.2 17.5 -77.5 -62.6 3.8 -7.8 -2.7 23 23 A A S > + 0 0 6 -6,-0.2 4,-3.4 1,-0.2 3,-0.7 -0.121 23.5 136.0-100.1 37.1 0.9 -10.5 1.2 25 25 A N H 3> S+ 0 0 137 1,-0.3 4,-1.1 2,-0.2 -1,-0.2 0.761 77.8 50.1 -53.5 -24.7 1.5 -14.2 0.9 26 26 A H H 3> S+ 0 0 156 -3,-0.3 4,-0.5 2,-0.2 -1,-0.3 0.812 113.5 43.2 -83.4 -33.1 -0.7 -14.5 3.9 27 27 A A H <> S+ 0 0 41 -3,-0.7 4,-1.8 2,-0.2 3,-0.5 0.896 113.8 49.9 -78.4 -43.2 -3.5 -12.3 2.5 28 28 A A H X S+ 0 0 51 -4,-3.4 4,-0.9 1,-0.2 -3,-0.2 0.921 105.4 56.9 -61.6 -45.9 -3.4 -13.9 -1.0 29 29 A G H < S+ 0 0 47 -4,-1.1 -1,-0.2 -5,-0.3 -2,-0.2 0.788 112.1 43.3 -57.0 -27.9 -3.6 -17.4 0.4 30 30 A I H >< S+ 0 0 134 -4,-0.5 3,-0.8 -3,-0.5 -1,-0.2 0.773 107.9 57.5 -87.7 -30.2 -6.8 -16.4 2.2 31 31 A L H 3< S+ 0 0 143 -4,-1.8 -2,-0.2 1,-0.3 -1,-0.2 0.540 94.3 70.6 -77.0 -6.5 -8.2 -14.6 -0.8 32 32 A T T 3< 0 0 99 -4,-0.9 -1,-0.3 -5,-0.2 -2,-0.1 -0.007 360.0 360.0 -98.8 28.4 -7.9 -17.8 -2.8 33 33 A L < 0 0 214 -3,-0.8 -3,-0.1 0, 0.0 -2,-0.1 0.467 360.0 360.0 59.1 360.0 -10.7 -19.5 -0.9