==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 17-OCT-03 1R6Y . COMPND 2 MOLECULE: PROTEIN YGIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR M.A.ADAMS,Z.JIA,MONTREAL-KINGSTON BACTERIAL STRUCTURAL GENOM . 103 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6657.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 80 77.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 26.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 15 14.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 27.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 162 0, 0.0 2,-0.4 0, 0.0 66,-0.2 0.000 360.0 360.0 360.0 -35.6 8.0 1.5 -20.7 2 2 A L E -A 66 0A 32 64,-2.4 64,-2.3 99,-0.1 2,-0.5 -0.808 360.0-157.6-100.3 133.3 4.5 2.1 -22.1 3 3 A T E -AB 65 100A 40 97,-2.4 97,-3.6 -2,-0.4 2,-0.5 -0.944 7.4-160.9-109.0 130.9 3.0 5.5 -22.5 4 4 A V E -AB 64 99A 3 60,-2.1 60,-2.6 -2,-0.5 2,-0.5 -0.938 9.1-173.3-112.5 126.0 -0.8 5.8 -22.7 5 5 A I E -AB 63 98A 61 93,-2.9 93,-2.7 -2,-0.5 2,-0.6 -0.975 12.4-178.1-116.1 112.1 -2.4 8.9 -24.2 6 6 A A E -AB 62 97A 2 56,-1.8 56,-2.9 -2,-0.5 2,-0.6 -0.954 12.6-154.8-114.5 120.8 -6.2 8.6 -23.6 7 7 A E E -AB 61 96A 79 89,-2.8 89,-2.4 -2,-0.6 2,-0.6 -0.847 6.3-162.1-100.3 126.0 -8.4 11.2 -24.9 8 8 A I E -AB 60 95A 1 52,-3.2 52,-2.5 -2,-0.6 2,-0.5 -0.933 3.1-156.3-110.8 121.1 -11.6 11.6 -23.1 9 9 A R E -AB 59 94A 113 85,-2.6 84,-2.9 -2,-0.6 85,-1.4 -0.864 15.4-159.3-102.4 120.6 -14.4 13.5 -24.9 10 10 A T E - B 0 92A 0 48,-2.1 82,-0.3 -2,-0.5 7,-0.1 -0.710 27.7 -89.8-102.2 163.1 -16.9 15.0 -22.6 11 11 A R - 0 0 111 80,-2.6 6,-0.3 -2,-0.3 5,-0.2 -0.388 50.5-113.5 -70.4 135.8 -20.5 16.1 -23.2 12 12 A P S S+ 0 0 72 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 -0.295 73.0 34.2 -64.9 151.5 -20.6 19.8 -24.2 13 13 A G S S+ 0 0 64 2,-0.0 2,-1.1 3,-0.0 4,-0.3 -0.839 92.0 29.9 116.8-145.2 -22.1 22.3 -21.9 14 14 A Q S S- 0 0 146 -2,-0.4 -3,-0.0 1,-0.2 -1,-0.0 -0.411 115.9 -51.8 -82.7 98.6 -22.5 23.0 -18.3 15 15 A H S > S+ 0 0 103 -2,-1.1 4,-2.1 1,-0.1 -1,-0.2 0.672 87.5 133.1 47.8 28.6 -19.6 21.6 -16.3 16 16 A H H > S+ 0 0 44 -5,-0.2 4,-2.0 -3,-0.2 5,-0.2 0.965 80.2 46.6 -59.3 -45.1 -19.6 18.1 -17.7 17 17 A R H > S+ 0 0 64 -6,-0.3 4,-2.4 -4,-0.3 5,-0.2 0.920 111.8 48.9 -65.0 -43.6 -15.8 18.5 -18.2 18 18 A Q H > S+ 0 0 94 1,-0.2 4,-3.5 2,-0.2 5,-0.2 0.915 107.7 56.3 -64.3 -36.4 -15.2 20.0 -14.7 19 19 A A H X S+ 0 0 31 -4,-2.1 4,-2.0 1,-0.2 -1,-0.2 0.942 108.4 47.7 -62.2 -39.6 -17.2 17.2 -13.2 20 20 A V H X S+ 0 0 0 -4,-2.0 4,-2.0 1,-0.2 -2,-0.2 0.939 112.5 48.4 -66.0 -41.1 -14.8 14.7 -14.9 21 21 A L H X S+ 0 0 33 -4,-2.4 4,-2.8 1,-0.2 -2,-0.2 0.911 107.9 55.3 -64.5 -38.1 -11.8 16.7 -13.6 22 22 A D H X S+ 0 0 82 -4,-3.5 4,-1.2 1,-0.3 -1,-0.2 0.898 106.2 50.8 -65.1 -38.5 -13.2 16.7 -10.2 23 23 A Q H X S+ 0 0 46 -4,-2.0 4,-1.0 -5,-0.2 -1,-0.3 0.872 110.4 50.4 -59.3 -38.9 -13.5 13.0 -10.2 24 24 A F H >X S+ 0 0 3 -4,-2.0 4,-2.5 1,-0.2 3,-0.5 0.869 100.5 62.6 -68.1 -39.4 -9.9 12.8 -11.3 25 25 A A H 3< S+ 0 0 75 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.914 105.9 47.6 -53.1 -34.8 -8.9 15.1 -8.5 26 26 A K H 3< S+ 0 0 136 -4,-1.2 4,-0.3 1,-0.2 -1,-0.2 0.737 121.3 33.4 -71.3 -31.9 -10.1 12.4 -6.1 27 27 A I H S+ 0 0 73 0, 0.0 4,-0.7 0, 0.0 -1,-0.2 0.924 114.4 45.8 -58.4 -40.8 -3.0 10.4 -5.9 30 30 A T H >4 S+ 0 0 59 -4,-0.3 3,-1.0 1,-0.2 4,-0.5 0.917 112.0 49.8 -66.0 -40.1 -4.3 6.9 -5.6 31 31 A V H >< S+ 0 0 0 -4,-2.5 3,-1.4 1,-0.3 -1,-0.2 0.906 106.2 57.3 -65.1 -40.8 -3.6 6.1 -9.3 32 32 A L H 3< S+ 0 0 83 -4,-2.9 -1,-0.3 1,-0.3 -2,-0.2 0.701 104.5 50.7 -64.6 -18.8 -0.1 7.4 -8.9 33 33 A K T << S+ 0 0 177 -3,-1.0 -1,-0.3 -4,-0.7 -2,-0.2 0.447 87.2 117.1 -93.9 -3.0 0.6 4.9 -6.0 34 34 A E S X S- 0 0 29 -3,-1.4 3,-1.8 -4,-0.5 2,-0.2 -0.330 80.5 -95.9 -64.7 150.2 -0.7 2.1 -8.1 35 35 A E T 3 S+ 0 0 154 1,-0.2 -1,-0.1 36,-0.1 40,-0.1 -0.427 109.4 19.0 -66.6 134.4 1.8 -0.5 -9.0 36 36 A G T 3 S+ 0 0 6 1,-0.2 31,-1.9 -2,-0.2 2,-0.5 0.344 92.7 131.1 89.6 -3.9 3.4 -0.0 -12.3 37 37 A C E < +C 66 0A 14 -3,-1.8 -1,-0.2 29,-0.2 29,-0.2 -0.705 21.6 162.2 -99.3 119.4 2.4 3.7 -12.5 38 38 A H E S- 0 0 107 27,-2.7 2,-0.2 -2,-0.5 28,-0.2 0.184 72.7 -0.4-115.6 21.0 5.0 6.2 -13.4 39 39 A G E +C 65 0A 17 26,-0.6 26,-2.2 -8,-0.1 -1,-0.4 -0.709 48.1 174.2 162.4 143.8 2.7 9.0 -14.4 40 40 A Y E +C 64 0A 15 24,-0.3 24,-0.2 -2,-0.2 -8,-0.1 -0.659 21.0 162.3-165.5 92.1 -1.0 9.8 -14.6 41 41 A A E -C 63 0A 31 22,-2.5 22,-2.4 -2,-0.2 2,-0.6 -0.966 30.6-146.0-130.8 122.9 -1.9 13.4 -15.5 42 42 A P E -C 62 0A 39 0, 0.0 2,-0.3 0, 0.0 20,-0.2 -0.764 28.2-171.2 -84.3 118.6 -5.3 14.8 -16.8 43 43 A M E -C 61 0A 80 18,-2.7 18,-2.7 -2,-0.6 2,-0.3 -0.818 10.9-167.0-114.1 146.5 -4.4 17.7 -19.1 44 44 A V - 0 0 59 -2,-0.3 16,-0.1 16,-0.2 14,-0.0 -0.947 38.7 -81.0-124.0 157.9 -6.6 20.2 -20.8 45 45 A D - 0 0 50 14,-0.3 2,-0.6 -2,-0.3 10,-0.1 -0.209 32.8-148.3 -53.9 136.9 -5.9 22.7 -23.7 46 46 A C - 0 0 99 -3,-0.0 2,-0.2 0, 0.0 -1,-0.1 -0.969 23.0-126.7-101.3 108.1 -4.1 25.9 -22.7 47 47 A A + 0 0 82 -2,-0.6 8,-0.0 1,-0.2 -2,-0.0 -0.395 37.7 169.5 -54.4 117.9 -5.4 28.7 -25.1 48 48 A A - 0 0 59 -2,-0.2 -1,-0.2 2,-0.2 3,-0.1 0.563 39.4-130.1-115.9 -10.4 -2.2 30.1 -26.5 49 49 A G + 0 0 82 1,-0.3 2,-0.3 2,-0.1 -2,-0.1 0.713 62.3 132.1 74.4 21.1 -3.6 32.3 -29.3 50 50 A V > - 0 0 59 1,-0.1 3,-1.2 4,-0.0 -1,-0.3 -0.817 60.9-129.8-114.9 148.4 -1.2 30.8 -31.9 51 51 A S T 3 S+ 0 0 124 -2,-0.3 -1,-0.1 1,-0.3 -2,-0.1 0.720 103.4 57.0 -74.8 -28.4 -2.3 29.7 -35.2 52 52 A F T 3 S+ 0 0 174 2,-0.1 -1,-0.3 0, 0.0 2,-0.3 0.582 86.1 98.5 -79.5 -13.7 -0.7 26.3 -35.2 53 53 A Q < - 0 0 53 -3,-1.2 2,-0.4 1,-0.0 -4,-0.0 -0.569 58.8-154.0 -75.0 130.3 -2.5 25.2 -31.9 54 54 A S - 0 0 105 -2,-0.3 2,-0.3 2,-0.0 -2,-0.1 -0.914 14.2-161.3 -98.9 137.4 -5.6 23.0 -32.1 55 55 A M - 0 0 88 -2,-0.4 -8,-0.0 -10,-0.1 0, 0.0 -0.884 18.9-178.6-120.6 150.1 -8.0 23.2 -29.2 56 56 A A > - 0 0 36 -2,-0.3 3,-0.8 3,-0.1 -11,-0.3 -0.714 3.8-173.6-147.3 85.8 -10.8 20.9 -28.1 57 57 A P T 3 S+ 0 0 89 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 0.740 83.1 56.8 -62.0 -20.9 -12.6 22.3 -25.0 58 58 A D T 3 S+ 0 0 56 -42,-0.0 -48,-2.1 -41,-0.0 2,-0.3 -0.337 96.7 92.4 -99.8 43.5 -14.8 19.1 -24.5 59 59 A S E < -A 9 0A 5 -3,-0.8 2,-0.4 -2,-0.4 -14,-0.3 -1.000 52.3-168.8-136.9 140.7 -11.7 17.1 -24.2 60 60 A I E -A 8 0A 0 -52,-2.5 -52,-3.2 -2,-0.3 2,-0.6 -0.998 16.6-152.2-122.6 134.2 -9.3 15.8 -21.4 61 61 A V E -AC 7 43A 37 -18,-2.7 -18,-2.7 -2,-0.4 2,-0.5 -0.934 5.6-154.6-111.5 119.9 -6.1 14.3 -22.4 62 62 A M E -AC 6 42A 2 -56,-2.9 -56,-1.8 -2,-0.6 2,-0.5 -0.771 5.3-166.3 -92.8 124.9 -4.6 11.7 -20.0 63 63 A I E +AC 5 41A 75 -22,-2.4 -22,-2.5 -2,-0.5 2,-0.3 -0.981 22.4 166.0-110.9 123.0 -0.9 11.2 -20.2 64 64 A E E -AC 4 40A 11 -60,-2.6 -60,-2.1 -2,-0.5 2,-0.4 -0.904 29.2-151.0-135.9 157.4 0.2 8.1 -18.4 65 65 A Q E +AC 3 39A 90 -26,-2.2 -27,-2.7 -2,-0.3 -26,-0.6 -0.998 17.6 177.2-134.6 130.6 3.1 5.7 -18.0 66 66 A W E -AC 2 37A 1 -64,-2.3 -64,-2.4 -2,-0.4 -29,-0.2 -0.996 32.3-134.1-134.5 141.4 2.7 2.1 -17.1 67 67 A E S S- 0 0 99 -31,-1.9 2,-0.3 -2,-0.4 -1,-0.1 0.846 83.5 -14.2 -67.1 -31.1 5.4 -0.6 -16.7 68 68 A S > - 0 0 32 -67,-0.1 4,-1.7 -32,-0.1 5,-0.2 -0.969 68.4 -96.7-157.1 171.8 3.5 -3.1 -18.8 69 69 A I H > S+ 0 0 85 -2,-0.3 4,-2.9 1,-0.2 5,-0.2 0.848 120.8 58.6 -60.0 -36.3 0.2 -4.0 -20.3 70 70 A A H > S+ 0 0 63 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.918 105.8 48.6 -62.8 -40.2 -0.5 -6.2 -17.2 71 71 A H H > S+ 0 0 37 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.881 112.4 47.2 -68.8 -40.8 -0.2 -3.2 -15.0 72 72 A L H X S+ 0 0 13 -4,-1.7 4,-1.6 2,-0.2 -1,-0.2 0.859 111.2 52.2 -59.7 -45.6 -2.5 -1.0 -17.2 73 73 A E H X S+ 0 0 115 -4,-2.9 4,-0.8 2,-0.2 -2,-0.2 0.947 110.6 47.3 -62.7 -37.4 -5.1 -3.9 -17.3 74 74 A A H >< S+ 0 0 59 -4,-2.2 3,-0.9 1,-0.2 4,-0.3 0.909 107.7 59.0 -66.7 -40.2 -5.0 -4.2 -13.4 75 75 A H H >< S+ 0 0 4 -4,-1.9 3,-1.5 1,-0.3 6,-0.3 0.901 101.6 52.4 -53.7 -41.4 -5.4 -0.5 -13.2 76 76 A L H 3< S+ 0 0 81 -4,-1.6 -1,-0.3 1,-0.3 -2,-0.2 0.670 108.6 51.2 -73.4 -22.6 -8.7 -0.6 -15.2 77 77 A Q T << S+ 0 0 123 -3,-0.9 -1,-0.3 -4,-0.8 -2,-0.2 0.413 86.1 113.7 -91.8 4.3 -10.1 -3.2 -12.8 78 78 A T S <> S- 0 0 26 -3,-1.5 4,-2.0 -4,-0.3 5,-0.2 -0.351 75.3-118.1 -77.4 160.1 -9.3 -1.2 -9.6 79 79 A P H > S+ 0 0 103 0, 0.0 4,-2.2 0, 0.0 5,-0.2 0.831 112.2 57.6 -68.2 -39.5 -12.0 0.1 -7.5 80 80 A H H > S+ 0 0 31 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.953 109.8 48.1 -59.6 -32.7 -11.2 3.7 -7.8 81 81 A M H > S+ 0 0 10 -6,-0.3 4,-3.0 2,-0.2 5,-0.2 0.927 112.1 46.6 -73.4 -39.2 -11.6 3.3 -11.7 82 82 A K H X S+ 0 0 123 -4,-2.0 4,-2.1 1,-0.2 -1,-0.2 0.923 114.8 48.7 -67.4 -35.0 -14.9 1.4 -11.6 83 83 A A H X S+ 0 0 59 -4,-2.2 4,-2.4 -5,-0.2 -2,-0.2 0.893 111.7 48.7 -67.3 -43.7 -16.1 4.1 -9.2 84 84 A Y H X S+ 0 0 20 -4,-2.5 4,-1.7 2,-0.2 -2,-0.2 0.940 111.2 51.5 -55.3 -48.5 -14.8 6.8 -11.5 85 85 A S H X S+ 0 0 66 -4,-3.0 4,-0.5 1,-0.2 3,-0.3 0.909 110.7 46.4 -61.5 -46.1 -16.5 5.2 -14.4 86 86 A E H >< S+ 0 0 108 -4,-2.1 3,-1.0 1,-0.2 -1,-0.2 0.916 111.8 51.5 -59.6 -45.1 -19.8 5.0 -12.6 87 87 A A H 3< S+ 0 0 47 -4,-2.4 3,-0.3 1,-0.2 -1,-0.2 0.773 115.1 41.1 -69.0 -16.9 -19.5 8.6 -11.4 88 88 A V H >X S+ 0 0 6 -4,-1.7 3,-2.6 -3,-0.3 4,-1.1 0.421 77.1 111.1-113.9 10.1 -18.8 10.0 -14.9 89 89 A K T << S+ 0 0 138 -3,-1.0 -1,-0.2 -4,-0.5 -2,-0.1 0.698 81.8 46.0 -62.5 -26.6 -21.3 8.0 -17.0 90 90 A G T 34 S+ 0 0 40 -3,-0.3 -1,-0.3 -4,-0.2 -2,-0.1 0.350 115.7 47.3 -90.0 0.6 -23.5 11.0 -17.8 91 91 A D T <4 S+ 0 0 30 -3,-2.6 -80,-2.6 1,-0.1 2,-0.4 0.571 96.7 72.6-113.4 -14.6 -20.6 13.3 -18.6 92 92 A V E < -B 10 0A 37 -4,-1.1 -82,-0.3 -82,-0.3 3,-0.1 -0.905 43.5-179.6-108.2 138.8 -18.3 11.2 -21.0 93 93 A L E - 0 0 67 -84,-2.9 2,-0.3 -2,-0.4 -83,-0.2 0.784 67.4 -22.7-102.8 -37.0 -19.1 10.4 -24.6 94 94 A E E -B 9 0A 119 -85,-1.4 -85,-2.6 2,-0.0 -1,-0.4 -0.986 46.2-141.5-165.3 169.3 -16.0 8.4 -25.5 95 95 A M E -B 8 0A 94 -2,-0.3 2,-0.6 -87,-0.2 -87,-0.2 -0.980 8.3-159.3-143.0 125.6 -12.4 7.6 -24.8 96 96 A N E -B 7 0A 100 -89,-2.4 -89,-2.8 -2,-0.3 2,-0.6 -0.959 16.5-160.0-107.6 109.8 -9.6 6.9 -27.4 97 97 A I E -B 6 0A 82 -2,-0.6 2,-0.4 -91,-0.2 -91,-0.2 -0.876 9.1-174.4 -99.0 108.7 -6.7 5.0 -25.9 98 98 A R E -B 5 0A 148 -93,-2.7 -93,-2.9 -2,-0.6 2,-0.5 -0.953 8.5-161.5 -94.6 147.1 -3.3 5.0 -27.5 99 99 A I E +B 4 0A 83 -2,-0.4 2,-0.3 -95,-0.2 -95,-0.2 -0.968 22.4 179.2-128.6 119.1 -0.5 2.9 -26.2 100 100 A L E -B 3 0A 57 -97,-3.6 -97,-2.4 -2,-0.5 3,-0.0 -0.749 19.8-169.5-126.7 158.4 2.8 4.0 -27.4 101 101 A Q - 0 0 141 -2,-0.3 -99,-0.1 -99,-0.2 -2,-0.0 -0.894 50.1 -65.9-137.0 170.0 6.5 3.3 -27.1 102 102 A P 0 0 119 0, 0.0 -1,-0.0 0, 0.0 -100,-0.0 -0.256 360.0 360.0 -57.0 129.9 9.7 5.2 -28.2 103 103 A G 0 0 131 -3,-0.0 0, 0.0 0, 0.0 0, 0.0 0.822 360.0 360.0-102.6 360.0 9.8 5.4 -31.9