==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 21-OCT-03 1R79 . COMPND 2 MOLECULE: DIACYLGLYCEROL KINASE, DELTA; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.MIYAMOTO,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, . 84 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7185.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 28 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 13.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 134 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 124.8 -45.8 33.8 42.5 2 2 A S + 0 0 129 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.803 360.0 141.3-169.5 122.9 -44.4 34.0 38.9 3 3 A S + 0 0 128 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.917 9.9 163.4-153.0 176.6 -43.3 31.3 36.4 4 4 A G - 0 0 72 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.904 8.1-175.3 171.1 161.5 -43.3 30.5 32.7 5 5 A S + 0 0 127 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.896 11.5 153.6-173.7 142.6 -41.8 28.3 30.0 6 6 A S + 0 0 123 -2,-0.3 2,-0.1 0, 0.0 -2,-0.0 -0.940 6.0 140.4-171.8 149.6 -42.0 27.9 26.2 7 7 A G + 0 0 71 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.451 9.4 174.2 163.7 119.9 -40.0 26.6 23.3 8 8 A T + 0 0 142 -2,-0.1 2,-0.3 2,-0.0 0, 0.0 -0.902 14.2 158.2-144.1 111.6 -40.6 24.7 20.1 9 9 A T - 0 0 146 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.961 10.2-179.7-133.9 150.8 -38.0 24.0 17.4 10 10 A L + 0 0 173 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.988 2.3 178.2-147.9 154.6 -37.6 21.5 14.6 11 11 A A - 0 0 84 -2,-0.3 2,-0.5 2,-0.0 -2,-0.0 -0.981 16.5-149.2-158.6 145.7 -35.2 20.6 11.8 12 12 A S + 0 0 125 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.951 31.8 149.8-124.0 113.2 -34.7 18.0 9.1 13 13 A I + 0 0 148 -2,-0.5 3,-0.1 1,-0.1 -2,-0.0 -0.845 13.8 120.4-134.4 170.8 -31.2 17.0 7.9 14 14 A G + 0 0 54 1,-0.3 2,-0.5 -2,-0.3 -1,-0.1 -0.109 61.3 70.6 169.6 -58.1 -29.4 14.0 6.6 15 15 A K + 0 0 199 2,-0.0 2,-0.4 0, 0.0 -1,-0.3 -0.757 54.2 174.9 -91.3 128.3 -27.8 14.6 3.2 16 16 A D - 0 0 113 -2,-0.5 2,-0.3 -3,-0.1 -3,-0.0 -0.984 37.3-112.5-137.7 124.9 -24.8 16.8 3.0 17 17 A I - 0 0 150 -2,-0.4 -2,-0.0 1,-0.2 0, 0.0 -0.356 22.5-161.4 -56.6 111.7 -22.6 17.6 0.0 18 18 A I + 0 0 148 -2,-0.3 2,-0.4 2,-0.0 -1,-0.2 0.013 59.4 103.7 -85.5 29.4 -19.2 16.0 0.9 19 19 A E - 0 0 113 5,-0.1 2,-0.1 2,-0.0 -2,-0.0 -0.912 53.4-161.0-116.1 141.1 -17.6 18.2 -1.7 20 20 A D - 0 0 74 -2,-0.4 4,-0.2 1,-0.0 -2,-0.0 -0.398 22.7-127.9-106.8-174.5 -15.5 21.3 -1.2 21 21 A A S S+ 0 0 98 -2,-0.1 -2,-0.0 2,-0.1 -1,-0.0 -0.131 95.3 55.4-128.4 36.2 -14.4 24.3 -3.3 22 22 A D S S- 0 0 160 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.579 126.5 -37.4-131.0 -50.1 -10.6 24.2 -2.8 23 23 A G - 0 0 56 2,-0.0 -2,-0.1 0, 0.0 -4,-0.0 0.024 59.8-145.7 178.6 58.0 -9.2 20.8 -3.7 24 24 A I - 0 0 71 -4,-0.2 2,-0.6 1,-0.1 -5,-0.1 0.088 19.8-129.1 -32.5 138.9 -11.4 17.8 -2.7 25 25 A A - 0 0 59 52,-0.0 -1,-0.1 0, 0.0 54,-0.1 -0.883 23.3-168.8-104.1 115.4 -9.3 14.9 -1.7 26 26 A M B -A 78 0A 65 52,-0.7 52,-1.5 -2,-0.6 54,-0.1 -0.896 11.6-142.5-107.6 126.8 -10.1 11.6 -3.5 27 27 A P - 0 0 87 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 0.117 30.6 -86.4 -69.8-170.7 -8.6 8.3 -2.2 28 28 A H - 0 0 27 50,-0.1 2,-1.5 33,-0.1 30,-0.0 -0.915 29.5-131.2-109.1 124.0 -7.5 5.3 -4.3 29 29 A Q - 0 0 102 -2,-0.5 31,-0.7 2,-0.0 2,-0.4 -0.553 27.6-158.3 -74.0 91.1 -10.0 2.7 -5.4 30 30 A W E -B 59 0B 58 -2,-1.5 2,-0.6 29,-0.2 29,-0.2 -0.583 4.6-162.4 -75.3 125.2 -8.0 -0.5 -4.4 31 31 A L E -B 58 0B 60 27,-0.9 27,-0.7 -2,-0.4 -1,-0.0 -0.921 23.3-120.0-114.4 110.2 -9.2 -3.5 -6.3 32 32 A E E S-B 57 0B 106 -2,-0.6 25,-0.2 25,-0.2 24,-0.2 -0.169 76.8 -28.9 -46.7 126.4 -8.3 -6.9 -4.9 33 33 A G S S+ 0 0 0 22,-1.7 25,-0.2 23,-1.7 -2,-0.2 -0.244 77.5 129.6 61.3-148.5 -6.2 -8.8 -7.4 34 34 A N + 0 0 93 16,-0.3 -1,-0.1 1,-0.2 17,-0.1 0.912 40.3 160.7 64.9 43.8 -6.9 -8.0 -11.1 35 35 A L - 0 0 23 15,-0.3 -1,-0.2 1,-0.1 19,-0.1 -0.803 37.4-119.4-101.7 139.2 -3.2 -7.5 -11.8 36 36 A P > - 0 0 57 0, 0.0 3,-1.5 0, 0.0 15,-0.1 -0.207 26.8-108.1 -69.8 163.1 -1.7 -7.6 -15.3 37 37 A V T 3 S+ 0 0 140 1,-0.3 14,-0.1 12,-0.1 -2,-0.0 0.873 122.7 41.2 -59.5 -38.6 1.0 -10.1 -16.4 38 38 A S T 3 S+ 0 0 108 9,-0.1 -1,-0.3 2,-0.0 11,-0.1 -0.207 88.9 153.5-103.5 40.9 3.6 -7.3 -16.5 39 39 A A < - 0 0 5 -3,-1.5 9,-1.1 9,-0.5 2,-0.3 -0.149 21.5-169.6 -65.2 164.4 2.3 -5.6 -13.3 40 40 A K B -D 47 0C 97 7,-0.2 25,-0.5 26,-0.0 2,-0.2 -0.954 23.7-113.7-160.4 138.4 4.6 -3.4 -11.1 41 41 A C - 0 0 3 5,-1.8 25,-0.2 -2,-0.3 4,-0.1 -0.510 13.1-159.4 -75.2 138.6 4.4 -1.8 -7.7 42 42 A T S S+ 0 0 78 23,-2.0 24,-0.1 -2,-0.2 -1,-0.1 0.280 90.7 47.3 -99.3 8.6 4.4 2.0 -7.6 43 43 A V S S+ 0 0 41 22,-0.3 -1,-0.1 3,-0.1 23,-0.1 0.709 132.6 9.8-114.5 -40.9 5.6 2.1 -4.0 44 44 A C S S- 0 0 43 2,-0.1 -2,-0.1 0, 0.0 22,-0.1 0.567 92.5-128.2-114.7 -19.5 8.5 -0.4 -3.9 45 45 A D + 0 0 107 1,-0.2 2,-0.3 -4,-0.1 -3,-0.1 0.959 55.4 146.7 68.6 52.7 8.9 -1.0 -7.7 46 46 A K - 0 0 138 1,-0.0 -5,-1.8 0, 0.0 -1,-0.2 -0.910 59.2 -85.1-122.3 149.6 8.8 -4.8 -7.5 47 47 A T B +D 40 0C 124 -2,-0.3 -7,-0.2 -7,-0.2 2,-0.2 -0.275 56.6 179.4 -52.8 122.3 7.5 -7.4 -9.9 48 48 A C + 0 0 17 -9,-1.1 -9,-0.5 -12,-0.1 -1,-0.0 -0.681 20.9 123.6-121.2 175.5 3.7 -7.8 -9.2 49 49 A G - 0 0 29 -2,-0.2 2,-1.1 -11,-0.1 3,-0.2 0.170 38.2-146.5 131.9 108.8 0.9 -9.9 -10.6 50 50 A S >> + 0 0 8 1,-0.2 4,-1.2 6,-0.1 3,-0.6 -0.668 27.3 166.3-100.0 78.7 -1.5 -12.3 -8.9 51 51 A V T 34 S+ 0 0 131 -2,-1.1 -1,-0.2 1,-0.2 -17,-0.1 0.976 85.9 5.4 -54.0 -64.0 -2.1 -14.8 -11.6 52 52 A L T 34 S+ 0 0 156 -3,-0.2 -1,-0.2 1,-0.1 -2,-0.1 -0.204 130.7 60.8-116.2 40.2 -3.7 -17.5 -9.4 53 53 A R T <4 S- 0 0 176 -3,-0.6 -2,-0.1 3,-0.0 -1,-0.1 0.538 71.4-159.9-132.6 -31.5 -3.8 -15.4 -6.2 54 54 A L < + 0 0 95 -4,-1.2 -3,-0.1 1,-0.1 -2,-0.0 0.905 58.3 111.1 43.1 53.9 -6.0 -12.4 -7.0 55 55 A Q + 0 0 97 -23,-0.2 -22,-1.7 2,-0.0 -1,-0.1 0.721 36.0 96.4-116.2 -62.7 -4.5 -10.5 -4.0 56 56 A D - 0 0 25 -24,-0.2 -23,-1.7 1,-0.1 2,-0.3 0.096 68.0-134.2 -32.4 141.3 -2.3 -7.7 -5.2 57 57 A W E +BC 32 66B 56 9,-1.7 9,-3.2 -25,-0.2 2,-0.3 -0.816 24.7 178.2-108.6 147.9 -4.3 -4.4 -5.2 58 58 A R E -BC 31 65B 47 -27,-0.7 -27,-0.9 -2,-0.3 7,-0.3 -0.967 29.2-115.4-151.6 131.3 -4.3 -1.8 -8.0 59 59 A C E -B 30 0B 0 5,-3.0 -29,-0.2 -2,-0.3 -31,-0.1 -0.263 13.0-156.2 -63.3 150.0 -6.2 1.6 -8.4 60 60 A L S S+ 0 0 89 -31,-0.7 -1,-0.1 3,-0.2 -30,-0.1 0.671 89.1 46.4 -99.8 -23.6 -8.8 1.8 -11.1 61 61 A W S S+ 0 0 50 -32,-0.1 -33,-0.1 1,-0.1 -2,-0.0 0.967 129.6 18.5 -81.5 -66.8 -8.6 5.6 -11.5 62 62 A C S S- 0 0 59 2,-0.1 -2,-0.1 -33,-0.0 -1,-0.1 0.630 101.4-130.0 -80.0 -14.3 -4.9 6.4 -11.5 63 63 A K + 0 0 119 1,-0.2 2,-0.5 -5,-0.0 -3,-0.2 0.966 48.1 160.0 63.5 55.0 -4.2 2.8 -12.4 64 64 A A - 0 0 17 2,-0.0 -5,-3.0 -22,-0.0 2,-0.4 -0.943 28.5-151.9-114.6 120.7 -1.5 2.3 -9.7 65 65 A M E +C 58 0B 33 -2,-0.5 -23,-2.0 -25,-0.5 2,-0.3 -0.764 24.1 164.6 -93.0 131.4 -0.6 -1.2 -8.6 66 66 A V E -C 57 0B 0 -9,-3.2 -9,-1.7 -2,-0.4 2,-0.1 -0.961 33.8-107.4-142.9 159.2 0.7 -1.7 -5.1 67 67 A H > - 0 0 45 -2,-0.3 4,-2.6 -11,-0.2 5,-0.1 -0.374 35.9-106.4 -83.1 164.6 1.2 -4.6 -2.6 68 68 A T H > S+ 0 0 88 2,-0.2 4,-0.8 1,-0.2 -1,-0.1 0.923 122.6 34.1 -55.3 -48.0 -0.9 -5.2 0.5 69 69 A S H > S+ 0 0 82 1,-0.2 4,-1.0 2,-0.2 3,-0.4 0.924 117.3 52.9 -74.3 -46.7 1.9 -3.9 2.8 70 70 A C H > S+ 0 0 23 1,-0.2 4,-2.2 2,-0.2 -2,-0.2 0.819 95.9 74.1 -58.4 -31.3 3.1 -1.3 0.4 71 71 A K H >< S+ 0 0 50 -4,-2.6 3,-0.8 1,-0.3 -1,-0.2 0.946 97.8 42.7 -46.1 -63.4 -0.4 0.0 0.2 72 72 A E H 3< S+ 0 0 160 -4,-0.8 -1,-0.3 -3,-0.4 -2,-0.2 0.815 110.3 60.6 -55.0 -31.2 -0.4 1.6 3.6 73 73 A S H 3< S+ 0 0 70 -4,-1.0 -1,-0.3 -3,-0.1 -2,-0.2 0.890 83.2 95.0 -64.5 -40.5 3.1 2.9 2.8 74 74 A L << + 0 0 32 -4,-2.2 -31,-0.1 -3,-0.8 -8,-0.0 -0.302 45.0 169.2 -56.1 128.5 1.7 4.8 -0.2 75 75 A L + 0 0 154 2,-0.1 -1,-0.2 -2,-0.0 -2,-0.0 0.798 40.0 101.1-107.2 -53.1 1.1 8.4 0.8 76 76 A T S S- 0 0 98 1,-0.1 2,-0.1 0, 0.0 0, 0.0 0.129 70.2-123.2 -33.0 148.6 0.4 10.3 -2.4 77 77 A K - 0 0 155 1,-0.1 2,-0.2 -50,-0.1 -1,-0.1 -0.426 20.2-106.6 -95.7 173.3 -3.3 11.0 -3.1 78 78 A C B -A 26 0A 15 -52,-1.5 -52,-0.7 -2,-0.1 -50,-0.1 -0.641 9.6-150.6-100.2 158.6 -5.4 10.0 -6.1 79 79 A S - 0 0 102 -2,-0.2 3,-0.1 1,-0.2 -1,-0.1 0.858 48.8-109.5 -93.0 -45.3 -6.7 12.3 -8.8 80 80 A G - 0 0 12 1,-0.1 -1,-0.2 -54,-0.1 3,-0.1 -0.638 27.5 -74.8 134.0 168.0 -9.9 10.5 -9.8 81 81 A P S S- 0 0 83 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.713 112.2 -8.5 -69.7 -21.1 -11.5 8.4 -12.5 82 82 A S + 0 0 106 -3,-0.1 -21,-0.0 1,-0.1 0, 0.0 -0.905 52.1 166.9-174.8 145.8 -12.0 11.5 -14.6 83 83 A S 0 0 123 -2,-0.3 -1,-0.1 -3,-0.1 -3,-0.0 0.590 360.0 360.0-129.1 -58.6 -11.7 15.3 -14.4 84 84 A G 0 0 124 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.782 360.0 360.0-106.2 360.0 -11.9 16.9 -17.8