==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 21-OCT-03 1R7C . COMPND 2 MOLECULE: GENOME POLYPROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR F.PENIN,V.BRASS,N.APPEL,S.RAMBOARINA,R.MONTSERRET,D.FICHEUX, . 31 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3809.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 24 77.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 22 71.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 186 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 170.3 -24.7 7.1 -5.8 2 2 A G - 0 0 73 0, 0.0 2,-0.5 0, 0.0 3,-0.2 -0.921 360.0 -61.5-177.4-157.5 -22.6 4.2 -4.6 3 3 A S > + 0 0 83 -2,-0.3 4,-2.1 1,-0.2 0, 0.0 -0.535 58.0 150.4-112.4 67.3 -19.9 3.2 -2.0 4 4 A W H > S+ 0 0 192 -2,-0.5 4,-1.8 2,-0.2 5,-0.2 0.900 73.7 56.7 -65.4 -37.7 -16.9 5.5 -3.0 5 5 A L H > S+ 0 0 148 1,-0.2 4,-1.6 -3,-0.2 -1,-0.2 0.943 110.8 43.4 -59.8 -44.8 -15.7 5.6 0.6 6 6 A R H > S+ 0 0 182 1,-0.2 4,-2.1 2,-0.2 5,-0.3 0.879 106.2 63.0 -68.6 -35.4 -15.4 1.7 0.6 7 7 A D H X S+ 0 0 104 -4,-2.1 4,-1.4 1,-0.2 -1,-0.2 0.906 107.4 42.9 -57.1 -40.0 -13.8 1.8 -2.9 8 8 A I H X S+ 0 0 71 -4,-1.8 4,-2.7 2,-0.2 -1,-0.2 0.875 107.2 61.9 -74.9 -35.3 -10.8 3.7 -1.4 9 9 A W H X S+ 0 0 184 -4,-1.6 4,-1.7 1,-0.2 -2,-0.2 0.961 107.1 42.8 -55.9 -52.4 -10.7 1.5 1.7 10 10 A D H X S+ 0 0 106 -4,-2.1 4,-1.4 1,-0.2 -1,-0.2 0.918 112.3 55.2 -61.6 -40.0 -10.0 -1.7 -0.4 11 11 A W H X S+ 0 0 155 -4,-1.4 4,-2.1 -5,-0.3 3,-0.3 0.925 105.9 51.3 -59.7 -42.4 -7.5 0.3 -2.5 12 12 A I H X S+ 0 0 65 -4,-2.7 4,-3.2 1,-0.2 -1,-0.2 0.879 101.5 62.5 -63.9 -34.3 -5.6 1.4 0.6 13 13 A C H X S+ 0 0 81 -4,-1.7 4,-1.8 -5,-0.2 -1,-0.2 0.923 107.3 43.4 -58.0 -41.3 -5.4 -2.3 1.6 14 14 A E H X S+ 0 0 116 -4,-1.4 4,-2.7 -3,-0.3 -1,-0.2 0.931 114.7 48.8 -70.8 -43.1 -3.3 -3.0 -1.5 15 15 A V H X S+ 0 0 36 -4,-2.1 4,-3.5 2,-0.2 5,-0.2 0.886 107.9 56.7 -64.6 -35.2 -1.2 0.1 -1.1 16 16 A L H X S+ 0 0 118 -4,-3.2 4,-1.7 2,-0.2 -1,-0.2 0.967 112.3 39.7 -61.3 -50.3 -0.6 -0.9 2.6 17 17 A S H X S+ 0 0 70 -4,-1.8 4,-1.9 -5,-0.2 -2,-0.2 0.916 116.8 51.7 -65.9 -39.5 0.8 -4.3 1.6 18 18 A D H X S+ 0 0 89 -4,-2.7 4,-3.9 1,-0.2 5,-0.3 0.950 105.1 55.2 -62.3 -47.1 2.7 -2.7 -1.4 19 19 A F H X S+ 0 0 125 -4,-3.5 4,-2.6 1,-0.2 5,-0.2 0.913 106.1 52.6 -53.5 -42.3 4.2 -0.0 0.9 20 20 A K H X S+ 0 0 169 -4,-1.7 4,-1.6 -5,-0.2 -1,-0.2 0.946 116.0 38.8 -60.6 -45.8 5.7 -2.8 3.1 21 21 A T H X S+ 0 0 91 -4,-1.9 4,-3.2 2,-0.2 5,-0.2 0.898 113.1 56.9 -72.1 -38.2 7.3 -4.5 0.1 22 22 A W H X S+ 0 0 134 -4,-3.9 4,-2.5 2,-0.2 5,-0.2 0.925 107.4 48.5 -59.6 -42.8 8.2 -1.2 -1.5 23 23 A L H X S+ 0 0 102 -4,-2.6 4,-2.6 -5,-0.3 5,-0.2 0.936 114.4 45.3 -64.4 -43.5 10.2 -0.3 1.7 24 24 A K H X S+ 0 0 143 -4,-1.6 4,-2.3 -5,-0.2 -2,-0.2 0.922 113.2 50.5 -66.6 -41.4 12.0 -3.7 1.7 25 25 A A H < S+ 0 0 60 -4,-3.2 -2,-0.2 1,-0.2 -1,-0.2 0.915 114.8 43.3 -64.0 -40.6 12.7 -3.4 -2.1 26 26 A K H < S+ 0 0 151 -4,-2.5 -2,-0.2 -5,-0.2 -1,-0.2 0.900 114.8 49.2 -72.7 -38.7 14.2 0.1 -1.7 27 27 A L H < S+ 0 0 149 -4,-2.6 -2,-0.2 -5,-0.2 -1,-0.2 0.858 89.7 95.5 -69.5 -32.9 16.2 -0.9 1.4 28 28 A M S < S- 0 0 121 -4,-2.3 3,-0.1 -5,-0.2 -4,-0.0 -0.441 71.9-144.9 -62.6 120.6 17.6 -4.0 -0.3 29 29 A P - 0 0 106 0, 0.0 2,-0.6 0, 0.0 -1,-0.1 -0.068 41.3 -60.9 -75.7-178.5 21.0 -3.1 -1.7 30 30 A Q 0 0 187 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.523 360.0 360.0 -68.9 113.7 22.4 -4.4 -5.0 31 31 A L 0 0 212 -2,-0.6 -3,-0.0 -3,-0.1 0, 0.0 -0.992 360.0 360.0-132.9 360.0 22.7 -8.2 -4.5