==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 21-OCT-03 1R7D . COMPND 2 MOLECULE: GENOME POLYPROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR F.PENIN,V.BRASS,N.APPEL,S.RAMBOARINA,R.MONTSERRET,D.FICHEUX, . 31 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3568.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 71.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 19 61.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 147 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 163.0 -21.6 8.9 -3.7 2 2 A G + 0 0 78 1,-0.3 2,-0.7 2,-0.0 0, 0.0 0.803 360.0 13.3 -97.1 -85.9 -22.1 5.1 -4.4 3 3 A S S S+ 0 0 79 1,-0.2 -1,-0.3 2,-0.1 5,-0.0 -0.826 70.8 139.1 -98.0 113.6 -19.2 3.0 -3.1 4 4 A W S > S+ 0 0 166 -2,-0.7 4,-1.3 -3,-0.1 5,-0.2 0.724 74.9 34.9-117.6 -54.9 -16.8 4.9 -0.9 5 5 A L T 4 S+ 0 0 109 2,-0.1 -2,-0.1 3,-0.1 0, 0.0 0.628 126.7 42.7 -79.3 -10.8 -15.7 2.7 2.1 6 6 A R T > S+ 0 0 186 2,-0.1 4,-1.1 3,-0.1 -1,-0.1 0.848 116.0 42.5-100.0 -47.6 -15.7 -0.4 -0.2 7 7 A D H > S+ 0 0 114 1,-0.2 4,-0.9 2,-0.2 3,-0.2 0.919 119.3 45.2 -66.5 -41.1 -14.1 0.9 -3.4 8 8 A I H X S+ 0 0 44 -4,-1.3 4,-2.8 1,-0.2 -1,-0.2 0.739 101.0 71.3 -75.1 -19.4 -11.4 2.8 -1.5 9 9 A W H > S+ 0 0 165 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.941 96.6 49.0 -63.0 -44.9 -10.8 -0.3 0.8 10 10 A D H X S+ 0 0 106 -4,-1.1 4,-1.8 -3,-0.2 -1,-0.2 0.926 113.6 47.3 -61.8 -40.9 -9.1 -2.3 -2.0 11 11 A W H X S+ 0 0 162 -4,-0.9 4,-2.4 1,-0.2 5,-0.3 0.936 108.3 54.3 -66.6 -43.3 -6.9 0.7 -2.8 12 12 A I H X S+ 0 0 71 -4,-2.8 4,-1.5 1,-0.2 -1,-0.2 0.870 108.4 51.2 -59.0 -33.1 -6.0 1.2 1.0 13 13 A C H X S+ 0 0 81 -4,-1.8 4,-1.9 -5,-0.2 -1,-0.2 0.905 109.2 48.9 -72.0 -39.3 -5.0 -2.5 1.0 14 14 A E H X S+ 0 0 111 -4,-1.8 4,-2.4 1,-0.2 5,-0.2 0.897 110.2 51.4 -68.1 -37.2 -2.7 -2.1 -2.0 15 15 A V H X S+ 0 0 43 -4,-2.4 4,-2.3 2,-0.2 -1,-0.2 0.873 108.0 53.3 -67.9 -34.2 -1.0 1.0 -0.5 16 16 A L H X S+ 0 0 132 -4,-1.5 4,-0.9 -5,-0.3 -2,-0.2 0.933 113.4 41.3 -67.5 -43.7 -0.4 -0.9 2.8 17 17 A S H X S+ 0 0 66 -4,-1.9 4,-1.7 2,-0.2 3,-0.3 0.904 116.2 49.8 -71.6 -38.8 1.4 -3.8 1.0 18 18 A D H X S+ 0 0 88 -4,-2.4 4,-3.5 1,-0.2 5,-0.5 0.908 102.9 60.3 -67.4 -38.8 3.3 -1.4 -1.4 19 19 A F H X S+ 0 0 139 -4,-2.3 4,-0.8 1,-0.2 -1,-0.2 0.846 109.5 44.7 -57.9 -30.1 4.5 0.8 1.5 20 20 A K H X S+ 0 0 147 -4,-0.9 4,-0.7 -3,-0.3 -1,-0.2 0.844 121.5 36.4 -83.4 -34.6 6.2 -2.3 2.9 21 21 A T H X S+ 0 0 81 -4,-1.7 4,-3.8 2,-0.2 5,-0.3 0.906 113.8 54.3 -85.6 -43.6 7.8 -3.4 -0.5 22 22 A W H X S+ 0 0 144 -4,-3.5 4,-1.6 1,-0.2 -3,-0.2 0.956 112.7 44.2 -54.7 -51.0 8.6 0.0 -2.0 23 23 A L H X S+ 0 0 107 -4,-0.8 4,-0.9 -5,-0.5 -1,-0.2 0.866 117.7 46.2 -63.6 -34.0 10.6 1.0 1.1 24 24 A K H >< S+ 0 0 90 -4,-0.7 3,-0.5 1,-0.2 -2,-0.2 0.932 108.1 54.2 -75.4 -44.8 12.3 -2.4 1.2 25 25 A A H 3< S+ 0 0 73 -4,-3.8 -2,-0.2 1,-0.2 -1,-0.2 0.836 100.0 64.3 -59.0 -30.9 13.1 -2.5 -2.6 26 26 A K H 3< S+ 0 0 147 -4,-1.6 -1,-0.2 -5,-0.3 -2,-0.2 0.935 116.9 15.7 -60.5 -44.8 14.9 0.9 -2.2 27 27 A L S << S+ 0 0 130 -4,-0.9 0, 0.0 -3,-0.5 0, 0.0 -0.397 94.0 65.1-114.6-165.7 17.5 -0.6 0.1 28 28 A M S S- 0 0 126 -2,-0.1 3,-0.2 3,-0.1 0, 0.0 0.384 74.8-106.6 66.0 150.8 18.8 -4.2 0.9 29 29 A P S S+ 0 0 110 0, 0.0 2,-0.8 0, 0.0 0, 0.0 0.966 103.9 32.7 -74.7 -83.1 20.4 -6.5 -1.6 30 30 A Q 0 0 161 1,-0.3 -5,-0.0 0, 0.0 -2,-0.0 -0.657 360.0 360.0 -79.8 108.9 17.9 -9.3 -2.4 31 31 A L 0 0 165 -2,-0.8 -1,-0.3 -3,-0.2 -6,-0.2 0.982 360.0 360.0 57.8 360.0 14.4 -7.6 -2.3