==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 21-OCT-03 1R7F . COMPND 2 MOLECULE: GENOME POLYPROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR F.PENIN,V.BRASS,N.APPEL,S.RAMBOARINA,R.MONTSERRET,D.FICHEUX, . 31 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3733.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 71.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 12.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 51.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 185 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -59.2 -25.8 -0.5 -7.8 2 2 A G - 0 0 78 1,-0.1 3,-0.1 3,-0.0 0, 0.0 -0.558 360.0-177.8 -79.9 143.4 -23.7 -1.1 -4.7 3 3 A S - 0 0 112 1,-0.4 2,-0.2 -2,-0.2 -1,-0.1 0.827 49.5 -67.0-105.5 -60.0 -21.1 -4.0 -4.9 4 4 A W S S- 0 0 150 0, 0.0 2,-2.3 0, 0.0 3,-0.4 -0.876 77.2 -37.2-169.0-158.5 -19.4 -4.3 -1.5 5 5 A L S > S+ 0 0 117 -2,-0.2 4,-0.8 1,-0.2 3,-0.3 -0.264 70.6 149.0 -78.5 56.1 -17.0 -2.5 0.9 6 6 A R T >4 S+ 0 0 156 -2,-2.3 3,-1.4 1,-0.2 4,-0.3 0.953 72.1 49.3 -56.4 -49.5 -14.9 -1.1 -2.0 7 7 A D T >> S+ 0 0 113 -3,-0.4 3,-2.2 1,-0.3 4,-0.8 0.820 96.6 73.4 -61.3 -27.5 -14.0 2.1 -0.1 8 8 A I H >> S+ 0 0 73 -3,-0.3 4,-0.8 1,-0.3 3,-0.6 0.842 85.3 64.8 -56.4 -31.8 -13.1 -0.1 2.9 9 9 A W H >S+ 0 0 63 -3,-2.2 4,-2.8 -4,-0.3 5,-0.6 0.870 92.1 62.5 -79.0 -35.0 -8.7 2.5 1.2 11 11 A W H <<5S+ 0 0 161 -4,-0.8 4,-0.4 -3,-0.6 -1,-0.2 0.848 118.1 29.4 -59.0 -30.3 -8.6 2.3 5.0 12 12 A I H X5S+ 0 0 89 -4,-0.8 4,-1.7 2,-0.1 -2,-0.2 0.830 124.0 46.4 -97.4 -39.8 -5.9 -0.4 4.6 13 13 A C H <5S+ 0 0 74 -4,-2.5 4,-0.3 2,-0.2 -3,-0.2 0.906 113.2 49.1 -71.0 -39.8 -4.3 0.7 1.3 14 14 A E T ><5S+ 0 0 128 -4,-2.8 3,-0.6 -5,-0.2 4,-0.5 0.906 116.3 42.4 -67.6 -39.2 -4.1 4.4 2.2 15 15 A V T 3> S+ 0 0 72 -3,-0.6 4,-2.4 -4,-0.3 5,-0.2 0.968 89.8 45.4 -68.4 -49.9 1.2 3.4 1.5 18 18 A D H > S+ 0 0 134 -4,-0.5 4,-2.0 -3,-0.3 5,-0.2 0.913 112.5 53.2 -59.8 -39.1 4.0 4.9 3.7 19 19 A F H X S+ 0 0 118 -4,-0.6 4,-1.7 1,-0.2 -1,-0.2 0.868 109.0 49.7 -64.8 -34.1 4.9 1.3 4.8 20 20 A K H X S+ 0 0 140 -4,-1.6 4,-3.4 -3,-0.2 5,-0.3 0.959 108.9 49.9 -70.8 -49.1 5.3 0.3 1.1 21 21 A T H X S+ 0 0 97 -4,-2.4 4,-1.7 1,-0.2 5,-0.2 0.919 111.1 51.0 -56.2 -42.1 7.5 3.3 0.1 22 22 A W H X S+ 0 0 130 -4,-2.0 4,-1.7 -5,-0.2 -1,-0.2 0.934 114.8 42.3 -62.6 -43.8 9.8 2.5 3.1 23 23 A L H X S+ 0 0 72 -4,-1.7 4,-2.8 1,-0.2 5,-0.3 0.902 109.5 57.7 -70.9 -39.0 10.1 -1.2 2.1 24 24 A K H X S+ 0 0 154 -4,-3.4 4,-1.0 1,-0.2 -1,-0.2 0.867 109.6 46.0 -60.4 -33.3 10.5 -0.4 -1.6 25 25 A A H < S+ 0 0 69 -4,-1.7 -1,-0.2 -5,-0.3 -2,-0.2 0.895 114.4 46.2 -77.1 -39.1 13.5 1.8 -0.7 26 26 A K H < S+ 0 0 151 -4,-1.7 -2,-0.2 1,-0.2 -1,-0.2 0.864 113.1 50.0 -71.7 -33.9 15.1 -0.9 1.6 27 27 A L H < S+ 0 0 145 -4,-2.8 -1,-0.2 -5,-0.2 -2,-0.2 0.787 87.7 99.4 -75.6 -25.5 14.5 -3.7 -1.0 28 28 A M < - 0 0 103 -4,-1.0 3,-0.1 -5,-0.3 -4,-0.0 -0.482 68.2-146.7 -65.9 121.0 16.1 -1.7 -3.8 29 29 A P - 0 0 102 0, 0.0 2,-0.1 0, 0.0 -1,-0.1 -0.039 43.1 -54.9 -75.6-176.1 19.7 -2.9 -4.2 30 30 A Q 0 0 194 1,-0.2 0, 0.0 0, 0.0 0, 0.0 -0.414 360.0 360.0 -64.1 131.6 22.6 -0.7 -5.3 31 31 A L 0 0 204 -2,-0.1 -1,-0.2 -3,-0.1 -3,-0.0 0.534 360.0 360.0-142.9 360.0 21.9 1.1 -8.6