==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 25-AUG-92 1RAP . COMPND 2 MOLECULE: REP A2 ISO-1-CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR M.E.P.MURPHY,G.D.BRAYER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6417.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 56.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 103 0, 0.0 2,-0.2 0, 0.0 66,-0.1 0.000 360.0 360.0 360.0 123.4 1.3 9.2 -3.4 2 -4 A E - 0 0 176 64,-0.1 2,-0.3 65,-0.1 0, 0.0 -0.623 360.0-174.7-169.2 96.7 1.5 11.6 -6.3 3 -3 A F - 0 0 52 -2,-0.2 2,-0.3 93,-0.0 64,-0.1 -0.769 7.6-156.3 -96.7 150.9 1.7 15.3 -5.5 4 -2 A K - 0 0 149 -2,-0.3 2,-0.1 90,-0.0 97,-0.1 -0.924 30.0 -91.5-130.0 154.1 1.6 18.0 -8.1 5 -1 A A + 0 0 81 -2,-0.3 93,-0.2 1,-0.1 2,-0.1 -0.417 49.6 173.1 -64.6 132.5 2.9 21.6 -8.0 6 1 A G - 0 0 34 91,-0.6 2,-0.5 92,-0.1 92,-0.1 -0.135 43.5 -51.0-117.5-154.7 0.4 24.2 -6.8 7 2 A S > - 0 0 50 1,-0.2 4,-2.1 -2,-0.1 95,-0.4 -0.857 33.2-165.8 -98.4 125.6 0.5 27.9 -6.0 8 3 A A H > S+ 0 0 23 -2,-0.5 4,-2.7 2,-0.2 5,-0.2 0.811 94.8 56.4 -74.0 -35.3 3.3 29.0 -3.6 9 4 A K H > S+ 0 0 183 2,-0.2 4,-1.1 1,-0.2 -1,-0.2 0.949 113.4 39.7 -57.0 -50.9 1.5 32.3 -3.2 10 5 A K H > S+ 0 0 90 2,-0.2 4,-1.4 1,-0.2 -2,-0.2 0.860 113.9 54.6 -68.1 -41.4 -1.6 30.4 -2.1 11 6 A G H X S+ 0 0 0 -4,-2.1 4,-2.1 87,-0.4 -2,-0.2 0.861 103.4 56.3 -64.1 -36.7 0.5 27.9 -0.1 12 7 A A H X S+ 0 0 14 -4,-2.7 4,-2.2 1,-0.2 -1,-0.2 0.845 107.8 48.1 -66.6 -39.1 2.2 30.8 1.9 13 8 A T H X S+ 0 0 69 -4,-1.1 4,-2.2 2,-0.2 -1,-0.2 0.764 108.0 54.0 -78.1 -18.1 -1.3 32.1 3.0 14 9 A L H X S+ 0 0 18 -4,-1.4 4,-2.8 2,-0.2 5,-0.4 0.952 109.8 50.6 -71.3 -44.3 -2.3 28.6 4.0 15 10 A F H X>S+ 0 0 3 -4,-2.1 5,-2.4 2,-0.2 4,-2.0 0.938 111.0 45.7 -54.9 -53.2 0.8 28.6 6.1 16 11 A K H <5S+ 0 0 133 -4,-2.2 5,-0.2 1,-0.2 -1,-0.2 0.927 120.3 41.9 -60.2 -41.6 0.0 31.9 7.7 17 12 A T H <5S+ 0 0 98 -4,-2.2 -2,-0.2 -5,-0.1 -1,-0.2 0.642 131.1 17.0 -80.5 -24.7 -3.6 30.8 8.3 18 13 A R H <5S+ 0 0 107 -4,-2.8 -3,-0.2 -3,-0.1 -2,-0.2 0.626 132.3 26.8-123.9 -21.7 -3.1 27.2 9.5 19 14 A C T >X5S+ 0 0 22 -4,-2.0 3,-1.7 -5,-0.4 4,-1.5 0.684 97.3 75.5-117.5 -31.2 0.5 26.6 10.6 20 15 A L T 34 S- 0 0 72 12,-0.1 3,-1.5 4,-0.1 12,-0.4 -0.369 77.8-110.4 -76.2 152.8 12.9 30.1 8.5 27 22 A Q T 3 S+ 0 0 148 1,-0.3 3,-0.1 -2,-0.1 -1,-0.1 -0.680 116.2 26.7 -77.6 128.5 16.6 29.2 9.2 28 23 A G T 3 S+ 0 0 76 1,-0.4 -1,-0.3 -2,-0.3 2,-0.2 0.586 96.4 137.5 86.9 6.0 17.3 30.8 12.5 29 24 A G < - 0 0 20 -3,-1.5 -1,-0.4 1,-0.1 2,-0.3 -0.565 52.3-117.0 -85.1 142.2 13.5 30.5 13.3 30 25 A A - 0 0 63 -2,-0.2 -6,-0.2 -3,-0.1 2,-0.1 -0.641 16.8-109.9 -91.8 152.5 12.6 29.4 16.8 31 26 A N + 0 0 56 -2,-0.3 2,-0.2 18,-0.1 -8,-0.1 -0.479 46.2 165.8 -70.8 147.2 10.8 26.3 18.0 32 27 A K - 0 0 90 2,-3.0 -10,-0.1 -10,-0.4 -9,-0.1 -0.224 68.6 -35.9-136.1-133.7 7.3 27.4 19.3 33 28 A V S S+ 0 0 103 -12,-0.3 -10,-0.2 -2,-0.2 -11,-0.1 0.903 141.3 35.2 -61.1 -38.9 4.4 25.0 20.1 34 29 A G S S- 0 0 5 -12,-3.1 -2,-3.0 1,-0.1 -10,-0.2 -0.714 104.4 -92.5-108.7 159.3 5.7 23.0 17.1 35 30 A P - 0 0 16 0, 0.0 2,-0.3 0, 0.0 -11,-0.2 -0.321 47.6 -92.6 -68.7 158.0 9.3 22.6 16.0 36 31 A N - 0 0 21 13,-0.2 -11,-0.2 -7,-0.2 -5,-0.1 -0.577 33.5-151.9 -68.9 131.2 11.0 24.9 13.5 37 32 A L > + 0 0 25 -13,-2.3 3,-1.9 -2,-0.3 4,-0.2 0.255 44.9 136.6 -87.3 1.9 10.4 23.3 10.0 38 33 A H T 3 S+ 0 0 40 -12,-0.4 70,-0.2 1,-0.3 -12,-0.1 -0.452 81.3 4.5 -57.4 133.1 13.5 24.7 8.3 39 34 A G T 3 S+ 0 0 25 68,-4.1 -1,-0.3 -14,-0.2 69,-0.1 0.606 83.8 141.9 65.9 28.7 15.1 21.9 6.2 40 35 A I X + 0 0 7 -3,-1.9 3,-1.7 67,-0.2 24,-0.4 0.752 40.9 94.2 -66.8 -31.1 12.4 19.3 6.9 41 36 A F T 3 S+ 0 0 36 1,-0.3 24,-0.2 -4,-0.2 3,-0.1 -0.585 98.9 11.4 -71.6 122.4 12.4 17.7 3.4 42 37 A G T 3 S+ 0 0 53 22,-4.3 -1,-0.3 1,-0.4 2,-0.1 0.264 107.4 108.8 89.2 -5.6 14.8 14.7 3.3 43 38 A R < - 0 0 72 -3,-1.7 21,-3.4 21,-0.3 -1,-0.4 -0.502 70.0-118.1 -90.9 174.5 15.1 14.7 7.1 44 39 A H B -A 63 0A 67 19,-0.2 3,-0.5 -2,-0.1 19,-0.2 -0.644 39.2 -87.9-101.8 172.0 13.5 12.1 9.3 45 40 A S S S+ 0 0 2 17,-1.6 -1,-0.1 -2,-0.2 16,-0.0 -0.294 103.8 30.5 -74.5 158.2 10.8 12.9 12.0 46 41 A G S S+ 0 0 16 -2,-0.1 -1,-0.2 1,-0.0 7,-0.1 0.799 85.9 109.1 66.2 35.9 11.7 13.9 15.5 47 42 A Q + 0 0 115 -3,-0.5 2,-0.3 2,-0.1 -2,-0.1 0.463 28.3 126.7-123.9 8.7 15.0 15.6 14.8 48 43 A A > - 0 0 12 1,-0.1 3,-1.6 2,-0.1 5,-0.1 -0.484 69.8-106.2 -67.2 126.4 14.6 19.4 15.2 49 44 A E T 3 S+ 0 0 184 -2,-0.3 -13,-0.2 1,-0.3 -18,-0.1 -0.340 95.6 3.9 -55.7 124.0 17.3 20.5 17.6 50 45 A G T 3 S+ 0 0 83 1,-0.2 2,-0.4 -2,-0.1 -1,-0.3 0.491 97.6 126.0 78.1 6.6 16.1 21.4 21.1 51 46 A Y < - 0 0 43 -3,-1.6 2,-1.0 -15,-0.1 -1,-0.2 -0.842 57.1-135.4-107.0 141.3 12.5 20.3 20.6 52 47 A S - 0 0 89 -2,-0.4 -3,-0.1 -3,-0.1 -6,-0.0 -0.728 30.8-175.6 -94.0 84.5 10.6 17.9 22.8 53 48 A Y - 0 0 35 -2,-1.0 2,-0.1 -5,-0.1 30,-0.0 -0.192 29.7 -97.8 -77.4 175.4 8.7 15.5 20.5 54 49 A T > - 0 0 27 1,-0.1 4,-1.7 0, 0.0 5,-0.1 -0.445 30.9-115.4 -83.4 165.2 6.3 12.8 21.4 55 50 A D H > S+ 0 0 123 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.938 117.9 60.6 -64.1 -41.8 7.5 9.1 21.6 56 51 A A H > S+ 0 0 24 26,-0.3 4,-1.2 1,-0.2 -1,-0.2 0.813 104.5 43.2 -50.3 -51.5 5.1 8.7 18.6 57 52 A N H >> S+ 0 0 15 25,-0.2 4,-1.0 2,-0.2 3,-0.5 0.946 115.9 49.9 -61.6 -55.1 6.7 11.2 16.2 58 53 A I H >< S+ 0 0 85 -4,-1.7 3,-0.7 1,-0.2 -2,-0.2 0.924 111.2 46.9 -48.0 -58.1 10.1 9.9 17.1 59 54 A K H 3< S+ 0 0 159 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.693 100.4 64.9 -62.0 -27.5 9.4 6.2 16.6 60 55 A K H << S- 0 0 91 -4,-1.2 -1,-0.2 -3,-0.5 -2,-0.2 0.807 81.5-164.8 -67.7 -30.2 7.6 6.7 13.2 61 56 A N << - 0 0 79 -4,-1.0 -3,-0.1 -3,-0.7 -2,-0.1 0.803 13.7-170.9 46.2 39.3 10.9 7.8 11.9 62 57 A V - 0 0 8 -5,-0.4 -17,-1.6 -18,-0.1 2,-0.4 -0.309 21.8-133.6 -56.7 137.7 9.1 9.2 8.9 63 58 A L B -A 44 0A 71 -19,-0.2 2,-0.7 -3,-0.1 -19,-0.2 -0.805 28.8-127.2 -90.7 133.9 11.4 10.4 6.1 64 59 A W + 0 0 11 -21,-3.4 -22,-4.3 -2,-0.4 -21,-0.3 -0.814 49.0 139.2 -94.4 120.3 10.0 13.8 5.1 65 60 A D > - 0 0 44 -2,-0.7 4,-1.8 -24,-0.2 3,-0.3 -0.823 65.7 -88.8-138.3 174.4 9.2 14.3 1.4 66 61 A E H > S+ 0 0 59 -2,-0.3 4,-1.5 1,-0.2 -64,-0.1 0.764 122.4 45.5 -63.9 -32.9 6.4 15.9 -0.5 67 62 A N H > S+ 0 0 48 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.650 114.1 47.2 -85.7 -22.4 4.1 12.8 -0.7 68 63 A N H > S+ 0 0 25 -3,-0.3 4,-2.5 2,-0.2 -2,-0.2 0.874 111.7 52.8 -73.6 -46.3 4.5 11.8 2.9 69 64 A M H X S+ 0 0 11 -4,-1.8 4,-3.3 1,-0.2 -2,-0.2 0.858 108.5 50.0 -58.2 -48.5 3.8 15.4 3.8 70 65 A S H X S+ 0 0 14 -4,-1.5 4,-0.6 2,-0.2 -1,-0.2 0.829 114.3 42.7 -64.0 -42.8 0.6 15.3 1.8 71 66 A E H X S+ 0 0 75 -4,-1.3 4,-1.0 2,-0.2 3,-0.3 0.835 115.2 53.4 -71.0 -33.4 -0.6 12.1 3.5 72 67 A Y H >< S+ 0 0 18 -4,-2.5 3,-1.0 1,-0.2 7,-0.3 0.981 107.4 48.6 -62.1 -58.0 0.6 13.5 6.7 73 68 A L H 3< S+ 0 0 15 -4,-3.3 17,-3.6 1,-0.2 -1,-0.2 0.579 99.2 70.1 -63.5 -12.6 -1.4 16.8 6.3 74 69 A T H 3< S- 0 0 54 -4,-0.6 -1,-0.2 15,-0.3 -2,-0.2 0.926 128.3 -13.3 -66.9 -49.4 -4.5 14.9 5.4 75 70 A N XX - 0 0 75 -3,-1.0 4,-2.1 -4,-1.0 3,-0.6 -0.595 65.4-169.0-159.5 88.2 -5.0 13.5 9.0 76 71 A P H 3> S+ 0 0 0 0, 0.0 4,-2.8 0, 0.0 7,-0.1 0.765 86.2 48.6 -48.1 -47.0 -2.0 13.9 11.3 77 72 A X H 34 S+ 0 0 141 10,-0.3 6,-0.2 2,-0.2 5,-0.1 0.748 112.3 50.9 -71.0 -25.4 -3.2 11.7 14.2 78 73 A K H <4 S+ 0 0 165 -3,-0.6 -1,-0.2 -6,-0.2 -6,-0.1 0.846 112.6 45.9 -77.1 -43.7 -4.1 9.0 11.8 79 74 A Y H < S+ 0 0 40 -4,-2.1 -2,-0.2 -7,-0.3 -1,-0.1 0.960 132.9 16.7 -67.0 -50.7 -0.6 9.2 10.2 80 75 A I S >< S- 0 0 1 -4,-2.8 3,-1.6 -8,-0.1 2,-0.3 -0.853 81.0-155.8-124.7 88.8 1.2 9.3 13.6 81 76 A P T 3 S+ 0 0 91 0, 0.0 -3,-0.1 0, 0.0 3,-0.1 -0.485 83.4 36.9 -69.5 126.1 -1.1 8.1 16.4 82 77 A G T 3 S+ 0 0 52 1,-0.3 -26,-0.3 -2,-0.3 -25,-0.2 0.402 84.6 143.5 108.8 2.6 0.1 9.6 19.6 83 78 A T < - 0 0 7 -3,-1.6 -1,-0.3 -6,-0.2 -6,-0.0 -0.421 46.0-151.0 -73.2 146.0 1.1 12.9 18.1 84 79 A K + 0 0 105 -2,-0.1 2,-0.4 -3,-0.1 -1,-0.1 0.569 60.7 118.0 -92.6 -13.1 0.6 16.1 20.1 85 80 A M - 0 0 44 1,-0.1 2,-0.8 -9,-0.1 -2,-0.1 -0.485 56.5-153.9 -59.9 111.4 0.1 18.2 16.9 86 81 A A + 0 0 93 -2,-0.4 2,-0.4 -10,-0.1 -1,-0.1 -0.421 50.1 122.7 -94.3 54.4 -3.4 19.5 17.4 87 82 A F - 0 0 44 -2,-0.8 -10,-0.3 1,-0.1 3,-0.1 -0.970 51.9-152.4-122.3 126.2 -4.3 20.0 13.8 88 83 A G - 0 0 65 -2,-0.4 -1,-0.1 1,-0.2 2,-0.0 0.549 48.9-105.9 -76.3 -18.9 -7.2 18.2 12.1 89 84 A G - 0 0 11 -14,-0.1 2,-0.9 1,-0.1 -15,-0.3 -0.045 20.3 -83.6 109.4 156.5 -5.9 18.1 8.6 90 85 A L - 0 0 6 -17,-3.6 6,-0.1 1,-0.2 -1,-0.1 -0.858 37.0-172.9-104.3 100.0 -6.1 19.6 5.1 91 86 A K + 0 0 182 -2,-0.9 2,-0.4 4,-0.1 -1,-0.2 0.888 62.3 73.2 -57.8 -52.3 -9.0 17.7 3.5 92 87 A K > - 0 0 118 1,-0.1 4,-2.0 2,-0.0 3,-0.3 -0.546 68.4-149.4 -78.1 121.9 -8.6 19.1 -0.1 93 88 A E H > S+ 0 0 104 -2,-0.4 4,-3.4 1,-0.2 5,-0.3 0.928 99.7 59.5 -53.9 -41.9 -5.6 17.9 -2.1 94 89 A K H > S+ 0 0 141 1,-0.3 4,-2.2 2,-0.2 -1,-0.2 0.916 106.0 47.6 -55.0 -44.6 -5.5 21.2 -3.9 95 90 A D H > S+ 0 0 34 -3,-0.3 4,-2.3 1,-0.2 -1,-0.3 0.902 112.9 49.2 -62.1 -44.6 -4.9 22.9 -0.5 96 91 A R H X S+ 0 0 30 -4,-2.0 4,-2.7 1,-0.2 -2,-0.2 0.856 109.1 51.6 -64.8 -37.2 -2.3 20.4 0.4 97 92 A N H X S+ 0 0 14 -4,-3.4 4,-1.5 2,-0.2 -91,-0.6 0.900 110.8 48.3 -65.2 -44.8 -0.5 20.8 -3.0 98 93 A D H X S+ 0 0 20 -4,-2.2 4,-2.3 -5,-0.3 -87,-0.4 0.939 113.7 45.8 -54.1 -56.9 -0.3 24.6 -2.5 99 94 A L H X S+ 0 0 2 -4,-2.3 4,-2.3 1,-0.2 -2,-0.2 0.872 114.3 47.5 -58.6 -46.0 1.0 24.3 1.1 100 95 A I H X S+ 0 0 0 -4,-2.7 4,-1.7 2,-0.2 -1,-0.2 0.708 108.3 56.8 -68.9 -23.7 3.6 21.7 0.2 101 96 A T H X S+ 0 0 14 -4,-1.5 4,-1.4 -3,-0.2 5,-0.2 0.974 112.4 41.1 -69.3 -53.8 4.7 23.8 -2.9 102 97 A Y H X S+ 0 0 26 -4,-2.3 4,-3.6 -95,-0.4 3,-0.2 0.878 113.4 52.4 -59.4 -44.3 5.4 26.8 -0.6 103 98 A L H X S+ 0 0 6 -4,-2.3 4,-3.7 1,-0.2 -1,-0.2 0.913 106.0 56.6 -60.1 -40.6 7.0 24.6 2.1 104 99 A K H < S+ 0 0 75 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.793 117.4 32.0 -56.5 -42.9 9.4 23.1 -0.5 105 100 A K H >< S+ 0 0 131 -4,-1.4 3,-0.6 -3,-0.2 -1,-0.2 0.840 123.7 47.9 -89.0 -32.6 10.7 26.5 -1.6 106 101 A A H 3< S+ 0 0 17 -4,-3.6 -2,-0.2 -5,-0.2 -3,-0.2 0.860 107.8 50.3 -77.2 -32.7 10.4 28.1 1.8 107 102 A C T 3< 0 0 1 -4,-3.7 -68,-4.1 -5,-0.2 -1,-0.2 0.250 360.0 360.0 -86.5 8.3 12.0 25.5 4.2 108 103 A E < 0 0 168 -3,-0.6 -1,-0.2 -70,-0.2 -2,-0.1 0.710 360.0 360.0 -97.0 360.0 15.2 25.1 2.1