==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SURFACE ACTIVE PROTEIN 11-NOV-03 1RG3 . COMPND 2 MOLECULE: PULMONARY SURFACTANT-ASSOCIATED PROTEIN B; . SOURCE 2 SYNTHETIC: YES; . AUTHOR V.BOOTH,A.J.WARING,F.J.WALTHER,K.M.KEOUGH . 16 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1779.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 9 56.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 18.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 37.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 87 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-131.3 -10.4 1.7 -1.9 2 2 A R + 0 0 195 1,-0.0 5,-0.0 2,-0.0 0, 0.0 0.701 360.0 21.2 63.4 126.6 -7.7 2.0 0.7 3 3 A M S S+ 0 0 117 1,-0.1 -1,-0.0 2,-0.0 0, 0.0 0.943 124.9 52.1 50.7 56.4 -5.4 -0.9 1.3 4 4 A L S S+ 0 0 126 0, 0.0 4,-0.2 0, 0.0 -1,-0.1 0.082 100.8 47.5-175.3 -53.5 -6.1 -2.5 -2.0 5 5 A P S S+ 0 0 93 0, 0.0 4,-0.2 0, 0.0 -2,-0.0 0.579 131.0 25.6 -83.6 -12.1 -5.6 -0.1 -4.9 6 6 A Q S > S+ 0 0 108 2,-0.1 4,-3.4 3,-0.1 5,-0.5 0.267 86.9 108.1-131.4 4.2 -2.3 1.0 -3.5 7 7 A L H > S+ 0 0 94 3,-0.2 4,-0.8 2,-0.2 7,-0.1 0.752 89.8 42.0 -56.6 -22.5 -1.3 -2.1 -1.5 8 8 A V H > S+ 0 0 93 -4,-0.2 4,-1.3 2,-0.2 6,-0.2 0.938 118.3 38.4 -87.3 -67.5 1.3 -2.7 -4.2 9 9 A C H >> S+ 0 0 93 1,-0.2 4,-1.2 2,-0.2 3,-0.6 0.892 121.4 48.8 -52.9 -38.1 2.8 0.7 -4.9 10 10 A R H >X S+ 0 0 102 -4,-3.4 4,-2.6 2,-0.2 3,-0.7 0.968 92.5 75.3 -66.4 -46.1 2.5 1.3 -1.2 11 11 A L H 3X S+ 0 0 75 -4,-0.8 4,-1.3 -5,-0.5 -1,-0.2 0.817 98.0 49.8 -29.6 -40.6 4.2 -2.1 -0.6 12 12 A V H X< S+ 0 0 109 -4,-1.3 3,-0.8 -3,-0.6 4,-0.4 0.982 119.1 34.2 -63.3 -51.0 7.1 -0.1 -1.6 13 13 A L H << S+ 0 0 87 -4,-1.2 -2,-0.3 -3,-0.7 -1,-0.3 0.487 99.9 82.0 -81.2 0.8 5.9 2.5 0.9 14 14 A R H 3< S+ 0 0 163 -4,-2.6 -1,-0.2 -6,-0.2 -3,-0.2 0.915 108.3 29.7 -66.4 -37.4 4.8 -0.4 3.1 15 15 A C << 0 0 92 -4,-1.3 -2,-0.2 -3,-0.8 -1,-0.2 0.551 360.0 360.0 -90.2 -16.4 8.4 -0.4 4.0 16 16 A S 0 0 145 -6,-0.4 -3,-0.1 -4,-0.4 -4,-0.0 0.063 360.0 360.0 -27.6 360.0 8.6 3.3 3.4