==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SURFACE ACTIVE PROTEIN 11-NOV-03 1RG4 . COMPND 2 MOLECULE: PULMONARY SURFACTANT-ASSOCIATED PROTEIN B; . SOURCE 2 SYNTHETIC: YES; . AUTHOR V.BOOTH,A.J.WARING,F.J.WALTHER,K.M.KEOUGH . 16 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1988.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 10 62.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 134 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 55.6 -10.4 -8.5 3.5 2 2 A R - 0 0 217 2,-0.0 2,-0.1 0, 0.0 0, 0.0 -0.305 360.0-166.7-176.4 81.2 -9.4 -4.8 3.8 3 3 A M + 0 0 176 2,-0.0 0, 0.0 1,-0.0 0, 0.0 -0.341 16.1 166.3 -74.9 155.6 -7.5 -3.1 1.0 4 4 A L - 0 0 85 -2,-0.1 3,-0.4 0, 0.0 -2,-0.0 -0.912 50.3 -97.2-155.5 179.9 -5.9 0.3 1.4 5 5 A P S >> S+ 0 0 101 0, 0.0 3,-1.1 0, 0.0 4,-0.7 0.143 87.4 107.4 -94.1 17.9 -3.4 2.8 -0.0 6 6 A Q H 3> + 0 0 121 1,-0.2 4,-1.6 2,-0.2 5,-0.1 0.459 57.8 83.0 -74.9 0.2 -0.6 1.5 2.1 7 7 A L H 3> S+ 0 0 119 -3,-0.4 4,-1.3 2,-0.2 -1,-0.2 0.837 90.0 49.4 -71.9 -32.4 0.9 -0.1 -1.0 8 8 A V H <> S+ 0 0 94 -3,-1.1 4,-1.2 2,-0.2 -1,-0.2 0.920 113.1 44.8 -71.7 -44.5 2.5 3.3 -1.9 9 9 A C H X S+ 0 0 83 -4,-0.7 4,-3.1 1,-0.2 -2,-0.2 0.797 108.3 59.5 -69.9 -27.4 4.0 3.7 1.6 10 10 A R H X>S+ 0 0 153 -4,-1.6 4,-3.3 2,-0.3 5,-0.6 0.881 101.9 53.0 -68.1 -35.3 5.1 0.1 1.5 11 11 A L H X5S+ 0 0 94 -4,-1.3 4,-0.7 1,-0.2 -1,-0.2 0.879 116.7 39.5 -64.5 -35.6 7.1 0.9 -1.6 12 12 A V H X5S+ 0 0 97 -4,-1.2 4,-0.6 3,-0.2 -2,-0.3 0.792 123.0 41.3 -82.1 -31.4 8.6 3.7 0.5 13 13 A L H <5S+ 0 0 121 -4,-3.1 3,-0.4 2,-0.2 -3,-0.2 0.952 117.9 43.2 -80.5 -55.8 8.8 1.6 3.6 14 14 A R H <5S+ 0 0 161 -4,-3.3 -3,-0.2 1,-0.3 -2,-0.2 0.854 117.9 49.2 -58.3 -33.6 10.0 -1.7 2.1 15 15 A C H << 0 0 79 -4,-0.7 -1,-0.3 -5,-0.6 -2,-0.2 0.777 360.0 360.0 -75.7 -27.1 12.4 0.4 0.0 16 16 A S < 0 0 153 -4,-0.6 -3,-0.0 -3,-0.4 -4,-0.0 -0.396 360.0 360.0 -58.1 360.0 13.5 2.2 3.2