==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 19-FEB-92 1RGL . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR J.GRANZIN,R.PURAS-LUTZKE,O.LANDT,H.-P.GRUNERT,U.HEINEMANN, . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5494.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 57.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 26.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 147 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 157.6 6.5 -4.7 15.3 2 2 A a - 0 0 48 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.861 360.0-163.0-105.0 132.3 7.7 -1.6 13.5 3 3 A D S S+ 0 0 87 8,-1.8 2,-0.3 -2,-0.4 9,-0.2 0.820 91.5 18.8 -77.4 -29.6 6.2 1.8 14.0 4 4 A Y E -A 11 0A 59 7,-1.9 7,-2.5 -3,-0.1 2,-0.5 -0.999 69.0-162.0-140.8 135.0 8.0 2.8 10.7 5 5 A T E -A 10 0A 46 -2,-0.3 99,-1.8 5,-0.2 2,-0.7 -0.972 4.1-173.9-123.7 117.8 9.3 0.6 8.0 6 6 A b E > -A 9 0A 0 3,-2.7 3,-2.8 -2,-0.5 2,-0.5 -0.907 68.7 -58.7-111.3 97.1 11.9 2.0 5.5 7 7 A G T 3 S- 0 0 48 -2,-0.7 97,-0.1 1,-0.3 84,-0.0 -0.532 124.1 -19.2 66.3-112.0 12.5 -0.6 2.9 8 8 A S T 3 S+ 0 0 120 -2,-0.5 2,-0.4 -3,-0.1 -1,-0.3 0.459 115.9 108.6-103.0 -0.6 13.7 -3.4 5.1 9 9 A N E < -A 6 0A 50 -3,-2.8 -3,-2.7 1,-0.0 2,-0.5 -0.623 53.9-155.8 -83.1 132.2 14.6 -1.1 8.1 10 10 A a E -A 5 0A 67 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.900 12.9-177.7-110.4 125.0 12.4 -1.3 11.1 11 11 A Y E -A 4 0A 3 -7,-2.5 -7,-1.9 -2,-0.5 -8,-1.8 -0.966 15.2-148.2-127.2 142.1 12.1 1.6 13.6 12 12 A S > - 0 0 34 -2,-0.4 4,-1.4 -10,-0.2 3,-0.5 -0.559 36.9-104.2 -96.4 169.2 10.3 2.0 16.8 13 13 A S H > S+ 0 0 60 1,-0.2 4,-2.3 -2,-0.2 5,-0.2 0.862 122.1 58.4 -59.5 -35.8 8.9 5.4 17.9 14 14 A S H > S+ 0 0 76 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.855 102.2 53.2 -63.7 -34.4 11.8 5.6 20.4 15 15 A D H > S+ 0 0 48 -3,-0.5 4,-2.0 2,-0.2 -1,-0.2 0.914 110.4 47.0 -65.7 -41.8 14.3 5.3 17.6 16 16 A V H X S+ 0 0 4 -4,-1.4 4,-2.9 2,-0.2 -2,-0.2 0.888 112.3 50.7 -65.5 -42.6 12.6 8.3 15.8 17 17 A S H X S+ 0 0 72 -4,-2.3 4,-2.1 2,-0.2 -2,-0.2 0.885 110.4 47.8 -63.8 -42.6 12.5 10.3 19.0 18 18 A T H X S+ 0 0 78 -4,-2.1 4,-1.5 2,-0.2 -1,-0.2 0.921 114.8 46.1 -66.6 -42.8 16.2 9.8 19.8 19 19 A A H X S+ 0 0 7 -4,-2.0 4,-2.5 2,-0.2 5,-0.2 0.934 112.6 49.9 -64.4 -48.6 17.2 10.7 16.2 20 20 A Q H X S+ 0 0 23 -4,-2.9 4,-2.7 1,-0.2 5,-0.2 0.903 108.2 54.0 -57.6 -42.9 14.9 13.8 16.1 21 21 A A H X S+ 0 0 60 -4,-2.1 4,-1.5 1,-0.2 -1,-0.2 0.874 110.3 45.9 -60.4 -39.9 16.3 15.0 19.4 22 22 A A H X S+ 0 0 27 -4,-1.5 4,-1.7 2,-0.2 -1,-0.2 0.916 113.9 47.0 -70.3 -45.4 19.9 14.8 18.2 23 23 A G H X S+ 0 0 0 -4,-2.5 4,-2.0 1,-0.2 -2,-0.2 0.890 110.9 52.6 -64.1 -41.1 19.2 16.5 14.9 24 24 A Y H X S+ 0 0 31 -4,-2.7 4,-2.3 -5,-0.2 -1,-0.2 0.889 106.4 53.1 -63.1 -39.4 17.2 19.3 16.5 25 25 A K H X S+ 0 0 106 -4,-1.5 4,-2.1 -5,-0.2 -1,-0.2 0.935 107.6 50.1 -61.8 -45.4 19.9 20.1 18.9 26 26 A L H X>S+ 0 0 34 -4,-1.7 5,-2.5 1,-0.2 4,-0.6 0.920 109.7 53.8 -58.0 -43.3 22.5 20.4 16.1 27 27 A H H ><5S+ 0 0 45 -4,-2.0 3,-0.8 1,-0.2 -1,-0.2 0.891 108.1 47.2 -58.0 -44.9 20.0 22.7 14.4 28 28 A E H 3<5S+ 0 0 126 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.873 112.8 51.5 -64.9 -36.7 19.6 25.0 17.4 29 29 A D H 3<5S- 0 0 89 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.540 110.0-121.1 -78.2 -8.6 23.4 25.1 17.8 30 30 A G T <<5S+ 0 0 69 -3,-0.8 2,-0.3 -4,-0.6 -3,-0.2 0.833 70.4 131.6 68.4 33.9 24.0 26.1 14.1 31 31 A E < - 0 0 111 -5,-2.5 2,-0.3 -6,-0.1 -1,-0.3 -0.814 37.2-172.2-119.9 155.9 26.0 22.9 13.7 32 32 A T - 0 0 61 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.940 7.1-154.5-140.4 160.4 26.2 20.1 11.2 33 33 A V B > +B 38 0B 42 5,-2.1 5,-2.3 -2,-0.3 37,-0.2 -0.971 51.3 32.1-136.4 150.8 28.0 16.7 10.9 34 34 A G T > 5S- 0 0 28 -2,-0.3 3,-1.6 35,-0.2 38,-0.1 0.035 92.9 -73.1 90.4 160.0 29.1 14.6 8.0 35 35 A S T 3 5S+ 0 0 110 1,-0.3 -1,-0.2 36,-0.2 37,-0.1 0.780 131.4 49.6 -62.9 -29.1 30.1 15.3 4.5 36 36 A N T 3 5S- 0 0 86 -3,-0.2 -1,-0.3 4,-0.0 -2,-0.1 0.207 112.7-117.2 -97.2 15.3 26.6 16.3 3.5 37 37 A S T < 5 - 0 0 56 -3,-1.6 -3,-0.2 1,-0.1 -2,-0.1 0.941 38.2-130.3 50.8 73.2 26.1 18.6 6.4 38 38 A Y B + 0 0 44 -2,-0.5 3,-1.4 1,-0.2 6,-0.1 -0.328 45.3 146.2 -82.3 58.7 8.7 18.9 0.0 45 45 A Y T 3 + 0 0 145 -2,-1.8 -1,-0.2 1,-0.3 0, 0.0 0.726 68.9 58.8 -67.8 -20.0 8.6 18.9 -3.8 46 46 A Q T 3 S- 0 0 75 -3,-0.3 -1,-0.3 55,-0.0 -2,-0.1 0.461 108.5-126.3 -86.6 -3.5 6.9 15.5 -3.9 47 47 A G < - 0 0 53 -3,-1.4 -2,-0.1 1,-0.1 -3,-0.1 0.813 34.8-174.1 64.8 38.2 4.1 16.8 -1.8 48 48 A F - 0 0 26 1,-0.1 2,-2.0 53,-0.0 -1,-0.1 -0.260 37.3-105.5 -59.3 148.6 4.1 14.3 1.1 49 49 A D + 0 0 147 2,-0.0 2,-0.4 0, 0.0 -1,-0.1 -0.468 51.0 169.9 -79.5 77.4 1.2 14.9 3.4 50 50 A F - 0 0 17 -2,-2.0 38,-0.1 1,-0.1 37,-0.1 -0.744 25.5-157.1 -88.2 134.7 3.0 16.5 6.4 51 51 A S S S+ 0 0 118 -2,-0.4 2,-0.3 36,-0.4 -1,-0.1 0.500 72.1 74.6 -88.8 -3.4 0.6 17.9 8.9 52 52 A V S S- 0 0 21 35,-0.1 2,-0.1 33,-0.1 -2,-0.1 -0.785 85.8-106.4-108.9 153.4 3.2 20.3 10.3 53 53 A S - 0 0 77 -2,-0.3 29,-0.3 1,-0.1 30,-0.2 -0.420 43.4 -90.0 -81.0 155.0 4.4 23.5 8.7 54 54 A S S S+ 0 0 75 27,-0.1 2,-0.2 -2,-0.1 -1,-0.1 -0.245 78.5 99.4 -81.7 174.5 7.8 24.1 7.1 55 55 A P - 0 0 50 0, 0.0 27,-1.1 0, 0.0 2,-0.3 0.461 65.6-165.8 -65.0 155.6 10.5 24.9 7.1 56 56 A Y E -CD 42 81C 24 -14,-0.6 -14,-2.6 25,-0.2 2,-0.3 -0.854 11.0-164.3-115.8 149.9 11.6 21.3 7.2 57 57 A Y E -CD 41 80C 33 23,-2.8 23,-2.2 -2,-0.3 2,-0.4 -0.957 10.9-141.6-131.0 147.6 15.0 19.8 8.0 58 58 A E E +CD 40 79C 14 -18,-3.0 -18,-1.7 -2,-0.3 21,-0.2 -0.922 18.4 176.7-115.9 140.2 16.3 16.2 7.4 59 59 A W E - D 0 78C 2 19,-2.0 19,-2.9 -2,-0.4 -36,-0.1 -0.999 34.5-103.6-138.6 134.6 18.5 14.2 9.7 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.5 -0.313 23.5-158.8 -67.3 144.0 19.7 10.7 9.2 61 61 A I B -G 67 0D 7 15,-1.6 15,-0.4 12,-0.2 2,-0.3 -0.987 17.8-141.7-118.8 122.7 18.1 7.8 11.2 62 62 A L > - 0 0 34 4,-0.7 3,-1.5 -2,-0.5 12,-0.1 -0.731 12.7-138.2 -93.5 136.4 20.4 4.6 11.3 63 63 A S T 3 S+ 0 0 84 -2,-0.3 -53,-0.1 1,-0.3 -1,-0.1 0.826 103.4 63.5 -58.3 -32.3 19.2 1.1 11.1 64 64 A S T 3 S- 0 0 76 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 0.673 110.7-118.6 -63.5 -26.8 21.6 0.2 13.9 65 65 A G S < S+ 0 0 41 -3,-1.5 2,-0.2 1,-0.4 -2,-0.1 0.396 73.0 128.9 96.9 -2.2 19.9 2.5 16.4 66 66 A D - 0 0 111 1,-0.1 -4,-0.7 -5,-0.0 -1,-0.4 -0.544 67.5-106.7 -82.9 155.7 23.0 4.6 16.8 67 67 A V B -G 61 0D 63 -2,-0.2 -6,-0.1 -6,-0.1 -1,-0.1 -0.675 43.3-101.9 -82.4 134.0 22.7 8.3 16.5 68 68 A Y + 0 0 8 -8,-0.5 3,-0.1 -2,-0.4 -1,-0.1 -0.301 45.1 171.3 -55.8 130.7 24.3 9.6 13.2 69 69 A S - 0 0 104 1,-0.7 -35,-0.2 3,-0.1 2,-0.2 0.115 60.1 -65.6-133.9 27.5 27.7 11.0 13.9 70 70 A G S S+ 0 0 19 -37,-0.2 -1,-0.7 1,-0.2 -37,-0.0 -0.561 98.5 87.1 109.3-179.5 29.3 11.7 10.4 71 71 A G S S- 0 0 61 -2,-0.2 -36,-0.2 -3,-0.1 -1,-0.2 -0.408 93.5 -12.0 89.8 172.4 30.1 8.7 8.4 72 72 A S - 0 0 103 1,-0.2 -3,-0.1 -38,-0.1 -2,-0.1 -0.422 57.0-159.2 -61.9 126.9 27.7 6.9 6.0 73 73 A P - 0 0 20 0, 0.0 3,-0.3 0, 0.0 -12,-0.2 0.522 21.9-147.4 -87.8 -3.9 24.2 8.3 6.5 74 74 A G - 0 0 45 1,-0.2 -12,-0.1 -14,-0.1 0, 0.0 -0.285 35.9 -73.4 70.0-165.9 22.3 5.4 4.9 75 75 A A S S+ 0 0 25 -14,-0.1 17,-2.0 -69,-0.1 18,-0.3 0.558 97.7 94.1-109.2 -11.4 19.1 6.0 3.1 76 76 A D E - E 0 91C 2 -15,-0.4 -15,-1.6 -3,-0.3 2,-0.3 -0.646 48.6-174.8 -92.1 144.0 16.6 6.8 5.9 77 77 A R E -DE 60 90C 9 13,-3.1 13,-2.6 -2,-0.3 2,-0.4 -0.991 22.5-145.2-139.7 146.3 15.7 10.2 7.3 78 78 A V E -DE 59 89C 0 -19,-2.9 -19,-2.0 -2,-0.3 2,-0.5 -0.849 23.3-150.4-101.6 136.6 13.7 11.8 10.0 79 79 A V E +DE 58 88C 0 9,-2.9 8,-3.4 -2,-0.4 9,-1.5 -0.958 21.4 170.5-114.6 122.5 12.0 15.1 8.9 80 80 A F E -DE 57 86C 0 -23,-2.2 -23,-2.8 -2,-0.5 6,-0.2 -0.887 21.5-130.0-127.0 159.9 11.4 17.8 11.6 81 81 A N E > -D 56 0C 1 4,-2.0 3,-2.1 -2,-0.3 -25,-0.2 -0.422 39.1 -86.0-102.6-178.9 10.3 21.4 11.4 82 82 A E T 3 S+ 0 0 70 -27,-1.1 -26,-0.1 1,-0.3 -28,-0.1 0.759 126.7 53.1 -54.4 -29.6 11.5 24.7 12.9 83 83 A N T 3 S- 0 0 125 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.095 119.6-104.9 -96.0 19.9 9.5 24.0 16.0 84 84 A N S < S+ 0 0 66 -3,-2.1 2,-0.4 1,-0.2 -2,-0.1 0.897 72.6 145.4 59.2 39.8 10.9 20.5 16.7 85 85 A Q - 0 0 88 -32,-0.1 -4,-2.0 -4,-0.1 2,-0.3 -0.933 55.0-112.2-111.2 135.9 7.8 18.8 15.5 86 86 A L E +E 80 0C 57 -2,-0.4 -6,-0.2 -6,-0.2 3,-0.1 -0.489 32.7 177.2 -68.3 123.9 8.0 15.5 13.6 87 87 A A E - 0 0 16 -8,-3.4 -36,-0.4 1,-0.4 2,-0.3 0.846 56.0 -67.3 -93.0 -45.7 7.0 15.9 10.0 88 88 A G E -E 79 0C 12 -9,-1.5 -9,-2.9 -38,-0.1 2,-0.4 -0.979 37.6 -95.8 173.1 179.7 7.6 12.3 8.9 89 89 A V E +E 78 0C 6 -2,-0.3 14,-3.0 14,-0.3 2,-0.3 -0.993 45.8 172.8-122.9 122.8 10.1 9.5 8.3 90 90 A I E -EF 77 102C 0 -13,-2.6 -13,-3.1 -2,-0.4 2,-0.3 -0.856 14.6-156.1-131.2 168.0 11.2 9.0 4.7 91 91 A T E -EF 76 101C 1 10,-2.6 10,-1.8 -2,-0.3 -15,-0.2 -0.998 27.4-146.6-147.3 150.1 13.7 7.0 2.6 92 92 A H S > S+ 0 0 52 -17,-2.0 3,-2.2 -2,-0.3 2,-0.2 0.653 72.0 115.4 -83.0 -16.8 15.6 7.1 -0.6 93 93 A T T 3 S+ 0 0 64 1,-0.3 -86,-0.2 -18,-0.3 -2,-0.1 -0.375 86.8 7.4 -57.6 118.2 15.2 3.3 -0.6 94 94 A G T 3 S+ 0 0 78 1,-0.3 2,-0.3 -2,-0.2 -1,-0.3 0.654 109.9 102.7 83.5 15.0 13.1 2.3 -3.6 95 95 A A < - 0 0 29 -3,-2.2 -1,-0.3 4,-0.2 2,-0.2 -0.944 69.6-120.1-126.9 146.7 13.1 5.8 -5.1 96 96 A S > - 0 0 95 -2,-0.3 3,-1.8 4,-0.1 2,-0.1 -0.578 68.3 -15.9 -88.7 157.2 15.1 7.0 -8.1 97 97 A G T 3 S- 0 0 71 1,-0.3 -2,-0.1 -2,-0.2 0, 0.0 -0.270 125.3 -24.3 62.8-135.9 17.6 9.8 -8.0 98 98 A N T 3 S+ 0 0 113 -2,-0.1 -1,-0.3 2,-0.0 -2,-0.1 0.285 109.2 115.6 -95.4 5.6 17.6 12.1 -5.2 99 99 A N < - 0 0 52 -3,-1.8 2,-0.3 -7,-0.1 -4,-0.2 -0.120 49.2-146.2 -77.1 172.4 13.9 11.4 -4.5 100 100 A F - 0 0 10 -6,-0.1 2,-0.3 -8,-0.0 -8,-0.2 -0.854 9.8-154.3-133.4 171.1 12.2 9.8 -1.6 101 101 A V E -F 91 0C 55 -10,-1.8 -10,-2.6 -2,-0.3 2,-0.2 -0.946 36.2-102.5-138.2 152.9 9.3 7.7 -0.5 102 102 A E E -F 90 0C 99 -2,-0.3 2,-0.3 -12,-0.2 -12,-0.3 -0.552 32.9-114.5 -81.1 150.3 7.6 7.7 2.9 103 103 A b 0 0 16 -14,-3.0 -14,-0.3 -2,-0.2 -97,-0.2 -0.663 360.0 360.0 -81.2 137.9 8.3 5.1 5.4 104 104 A T 0 0 139 -99,-1.8 -98,-0.1 -2,-0.3 -1,-0.1 0.596 360.0 360.0 -89.4 360.0 5.2 2.9 6.1