==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAY-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MOTOR PROTEIN 15-APR-11 3RJS . COMPND 2 MOLECULE: DYNEIN LIGHT CHAIN MOTOR PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII; . AUTHOR B.QURESHI,W.HOEHNE,P.SCHEERER . 87 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5464.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 65.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 25.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A D 0 0 132 0, 0.0 20,-0.1 0, 0.0 2,-0.0 0.000 360.0 360.0 360.0 -85.8 29.3 4.5 -2.2 2 4 A R - 0 0 149 1,-0.1 2,-0.3 18,-0.1 22,-0.1 -0.288 360.0-112.2 -72.9 147.7 25.8 5.0 -3.8 3 5 A K - 0 0 188 21,-0.0 74,-0.5 -2,-0.0 2,-0.4 -0.568 27.6-145.2 -78.7 136.4 25.3 6.4 -7.3 4 6 A A - 0 0 30 -2,-0.3 2,-0.6 72,-0.1 72,-0.2 -0.808 2.9-149.4-100.6 143.4 23.6 9.7 -7.6 5 7 A V E -A 75 0A 102 70,-2.9 70,-3.6 -2,-0.4 2,-0.5 -0.965 19.4-146.2-107.7 114.2 21.3 10.7 -10.4 6 8 A I E +A 74 0A 68 -2,-0.6 68,-0.3 68,-0.3 3,-0.1 -0.685 23.2 174.2 -85.9 126.2 21.6 14.5 -11.0 7 9 A K E S+ 0 0 144 66,-2.5 2,-0.4 -2,-0.5 67,-0.2 0.888 70.7 1.5 -95.8 -56.3 18.4 16.2 -12.1 8 10 A N E S+A 73 0A 82 65,-1.8 65,-3.0 2,-0.0 -1,-0.4 -0.998 73.8 164.3-132.3 143.7 19.5 19.9 -12.1 9 11 A A E +A 72 0A 31 -2,-0.4 63,-0.3 63,-0.3 2,-0.1 -0.992 27.1 174.7-153.6 161.4 22.9 21.4 -11.3 10 12 A D E +A 71 0A 52 61,-2.7 61,-1.8 -2,-0.3 62,-0.0 -0.510 49.4 109.6-167.1 79.9 25.2 24.5 -11.6 11 13 A M S S- 0 0 17 59,-0.2 59,-0.1 -2,-0.1 58,-0.1 -0.984 73.5 -90.7-152.3 150.8 28.5 23.8 -9.7 12 14 A P > - 0 0 73 0, 0.0 4,-2.4 0, 0.0 3,-0.3 -0.367 48.7-114.1 -57.0 147.5 32.1 23.1 -10.4 13 15 A E H > S+ 0 0 117 1,-0.2 4,-2.2 2,-0.2 5,-0.1 0.849 115.3 54.4 -64.2 -31.1 32.5 19.4 -10.7 14 16 A D H > S+ 0 0 126 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.885 110.2 47.9 -65.3 -36.8 34.7 19.1 -7.6 15 17 A L H > S+ 0 0 26 -3,-0.3 4,-2.4 2,-0.2 -2,-0.2 0.893 110.5 51.8 -72.0 -36.2 31.9 20.8 -5.6 16 18 A Q H X S+ 0 0 26 -4,-2.4 4,-2.6 2,-0.2 -2,-0.2 0.926 110.0 49.4 -60.9 -45.9 29.3 18.6 -7.2 17 19 A Q H X S+ 0 0 101 -4,-2.2 4,-2.7 1,-0.2 5,-0.2 0.918 110.2 50.1 -59.6 -44.4 31.4 15.6 -6.2 18 20 A D H X S+ 0 0 36 -4,-2.3 4,-2.5 1,-0.2 -1,-0.2 0.911 109.6 52.3 -62.2 -40.4 31.7 16.9 -2.6 19 21 A A H X S+ 0 0 1 -4,-2.4 4,-2.6 2,-0.2 -2,-0.2 0.932 112.0 44.4 -60.4 -48.1 27.9 17.4 -2.5 20 22 A I H X S+ 0 0 25 -4,-2.6 4,-2.5 2,-0.2 -2,-0.2 0.930 114.8 48.2 -63.5 -44.2 27.1 13.9 -3.6 21 23 A D H X S+ 0 0 82 -4,-2.7 4,-2.4 2,-0.2 -2,-0.2 0.895 111.6 51.3 -63.1 -38.1 29.7 12.4 -1.2 22 24 A C H X S+ 0 0 3 -4,-2.5 4,-2.5 -5,-0.2 -2,-0.2 0.937 109.5 49.3 -65.3 -46.2 28.3 14.5 1.6 23 25 A A H X S+ 0 0 0 -4,-2.6 4,-2.7 2,-0.2 -2,-0.2 0.901 109.4 52.5 -59.4 -41.8 24.8 13.3 0.9 24 26 A N H X S+ 0 0 5 -4,-2.5 4,-1.8 1,-0.2 -1,-0.2 0.933 109.6 48.7 -63.2 -41.5 25.9 9.7 0.9 25 27 A Q H X S+ 0 0 91 -4,-2.4 4,-2.1 2,-0.2 -2,-0.2 0.930 111.6 50.1 -57.7 -45.2 27.6 10.2 4.3 26 28 A A H X S+ 0 0 0 -4,-2.5 4,-2.6 1,-0.2 -2,-0.2 0.899 108.4 52.2 -61.5 -43.8 24.4 11.8 5.6 27 29 A L H < S+ 0 0 41 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.816 109.9 49.3 -65.8 -32.3 22.3 9.0 4.4 28 30 A E H < S+ 0 0 134 -4,-1.8 -1,-0.2 -5,-0.2 -2,-0.2 0.878 116.2 42.3 -70.7 -37.2 24.5 6.5 6.1 29 31 A K H < S+ 0 0 108 -4,-2.1 2,-0.3 -5,-0.1 -2,-0.2 0.847 120.6 29.3 -77.4 -34.7 24.4 8.4 9.4 30 32 A Y < - 0 0 79 -4,-2.6 -1,-0.1 -5,-0.2 3,-0.0 -0.944 39.2-173.5-135.7 148.0 20.7 9.3 9.5 31 33 A N + 0 0 155 -2,-0.3 2,-0.5 -3,-0.1 -1,-0.1 0.598 69.6 91.7-109.5 -19.4 17.3 8.1 8.4 32 34 A I S >> S- 0 0 109 1,-0.1 4,-2.3 2,-0.0 3,-0.7 -0.669 73.1-142.3 -79.7 122.3 15.3 11.2 9.5 33 35 A E H 3> S+ 0 0 79 -2,-0.5 4,-2.8 1,-0.3 5,-0.2 0.844 98.5 55.6 -58.7 -38.4 15.1 13.6 6.6 34 36 A K H 3> S+ 0 0 167 1,-0.2 4,-2.4 2,-0.2 -1,-0.3 0.888 110.7 46.1 -56.8 -41.2 15.5 16.7 8.8 35 37 A D H <> S+ 0 0 66 -3,-0.7 4,-2.5 2,-0.2 -2,-0.2 0.874 111.4 51.0 -73.3 -38.8 18.8 15.3 10.2 36 38 A I H X S+ 0 0 6 -4,-2.3 4,-2.4 2,-0.2 -2,-0.2 0.966 113.5 45.5 -60.4 -51.5 20.1 14.3 6.7 37 39 A A H X S+ 0 0 14 -4,-2.8 4,-2.8 1,-0.2 5,-0.2 0.912 113.0 50.6 -56.3 -45.8 19.3 17.8 5.4 38 40 A A H X S+ 0 0 35 -4,-2.4 4,-2.6 -5,-0.2 5,-0.2 0.901 108.7 51.3 -64.0 -42.8 20.9 19.5 8.5 39 41 A F H X S+ 0 0 27 -4,-2.5 4,-2.5 2,-0.2 -1,-0.2 0.945 113.3 45.0 -58.3 -47.9 24.1 17.4 8.2 40 42 A I H X S+ 0 0 1 -4,-2.4 4,-2.5 1,-0.2 -2,-0.2 0.942 114.1 48.0 -64.5 -45.6 24.5 18.3 4.6 41 43 A K H X S+ 0 0 53 -4,-2.8 4,-2.5 1,-0.2 11,-0.3 0.917 113.7 48.0 -59.0 -46.6 23.8 22.1 5.1 42 44 A K H X S+ 0 0 135 -4,-2.6 4,-2.5 1,-0.2 -1,-0.2 0.886 110.1 51.2 -65.5 -40.4 26.2 22.2 8.0 43 45 A E H X S+ 0 0 27 -4,-2.5 4,-2.8 -5,-0.2 5,-0.4 0.920 112.0 48.0 -61.7 -43.0 28.9 20.5 6.2 44 46 A F H X S+ 0 0 0 -4,-2.5 4,-2.2 -5,-0.2 -2,-0.2 0.906 110.9 49.1 -70.1 -36.8 28.6 22.9 3.3 45 47 A D H X S+ 0 0 35 -4,-2.5 4,-1.1 -5,-0.2 -1,-0.2 0.940 116.9 43.9 -61.5 -44.3 28.6 26.0 5.5 46 48 A R H < S+ 0 0 159 -4,-2.5 -2,-0.2 -5,-0.2 -1,-0.2 0.909 126.2 27.7 -69.3 -43.1 31.7 24.8 7.3 47 49 A K H < S+ 0 0 88 -4,-2.8 -1,-0.2 -5,-0.2 -3,-0.2 0.744 133.8 29.8 -91.7 -25.7 33.7 23.6 4.3 48 50 A H H < S- 0 0 48 -4,-2.2 -2,-0.2 -5,-0.4 -3,-0.2 0.118 113.2 -96.5-128.6 18.8 32.3 25.9 1.5 49 51 A N < - 0 0 115 -4,-1.1 -3,-0.1 -3,-0.1 -2,-0.1 0.575 58.5 -47.9 76.3 138.5 31.3 29.1 3.4 50 52 A P S S+ 0 0 79 0, 0.0 35,-0.1 0, 0.0 -8,-0.0 -0.308 90.8 50.1 -70.6 161.4 27.8 30.0 4.6 51 53 A T + 0 0 78 33,-0.1 35,-0.5 1,-0.1 2,-0.2 0.403 54.7 148.7-122.9 131.1 25.0 30.1 3.8 52 54 A W - 0 0 1 -11,-0.3 2,-0.4 33,-0.1 33,-0.2 -0.690 26.2-151.3-107.3 162.2 23.6 27.0 2.2 53 55 A H E -B 84 0A 80 31,-2.3 31,-2.1 -2,-0.2 2,-0.4 -0.991 12.9-169.2-133.2 140.8 20.1 25.5 2.3 54 56 A C E -B 83 0A 21 -2,-0.4 2,-0.4 29,-0.2 29,-0.2 -0.992 11.3-175.4-139.3 136.9 19.2 21.9 2.0 55 57 A V E -B 82 0A 61 27,-2.3 27,-2.7 -2,-0.4 2,-0.4 -0.995 8.6-175.1-127.1 135.5 16.0 19.8 1.4 56 58 A V E +B 81 0A 11 -2,-0.4 2,-0.3 25,-0.2 25,-0.2 -0.999 24.4 113.5-132.0 131.0 15.9 16.0 1.5 57 59 A G E -B 80 0A 3 23,-2.3 23,-2.9 -2,-0.4 3,-0.2 -0.969 61.6-118.0 177.9 169.6 12.9 13.8 0.7 58 60 A R S S+ 0 0 154 -2,-0.3 2,-0.2 1,-0.2 -1,-0.1 0.550 104.6 37.2 -97.7 -11.3 11.0 11.3 -1.3 59 61 A N S S+ 0 0 158 21,-0.1 2,-0.3 -3,-0.1 -1,-0.2 -0.701 81.5 104.6-146.7 94.2 8.1 13.6 -2.2 60 62 A F - 0 0 50 -2,-0.2 2,-0.3 -3,-0.2 -3,-0.1 -0.985 39.3-153.8-159.0 157.4 8.6 17.3 -2.9 61 63 A G - 0 0 73 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.943 22.3-171.2-125.2 152.1 8.7 19.9 -5.6 62 64 A S - 0 0 62 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.958 23.1-167.1-143.1 160.1 10.6 23.2 -5.3 63 65 A Y + 0 0 227 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.830 30.4 157.2-147.6 107.3 11.1 26.5 -7.0 64 66 A V - 0 0 50 -2,-0.3 2,-0.6 22,-0.0 -2,-0.0 -0.860 41.1-125.1-132.7 160.4 14.0 28.4 -5.7 65 67 A T - 0 0 101 -2,-0.3 22,-2.3 19,-0.0 2,-0.3 -0.943 36.3-166.8-110.4 113.5 16.4 31.2 -6.9 66 68 A H E - C 0 86A 58 -2,-0.6 20,-0.3 20,-0.3 2,-0.3 -0.689 23.8-110.3-108.9 153.1 20.0 30.1 -6.7 67 69 A E E > - 0 0 70 18,-2.8 3,-2.0 3,-0.4 18,-0.3 -0.572 50.3 -94.8 -73.5 137.6 23.3 31.8 -6.9 68 70 A T E 3 S+ 0 0 89 1,-0.3 -1,-0.1 -2,-0.3 -58,-0.1 -0.226 109.2 13.4 -53.3 142.9 25.2 30.9 -10.1 69 71 A H E 3 S+ 0 0 110 1,-0.1 -1,-0.3 -58,-0.1 -59,-0.1 0.506 111.2 85.6 66.2 7.7 27.7 28.1 -9.6 70 72 A H E < + 0 0 47 -3,-2.0 15,-2.1 15,-0.2 -3,-0.4 -0.369 66.8 95.3-132.9 57.1 26.2 27.1 -6.2 71 73 A F E +AC 10 84A 11 -61,-1.8 -61,-2.7 13,-0.2 2,-0.3 -0.986 33.5 161.6-151.4 134.3 23.3 24.8 -7.0 72 74 A I E -AC 9 83A 0 11,-2.0 11,-2.6 -2,-0.3 2,-0.4 -0.976 10.0-178.1-150.8 143.1 22.6 21.1 -7.2 73 75 A Y E +AC 8 82A 22 -65,-3.0 -66,-2.5 -2,-0.3 -65,-1.8 -0.955 27.6 149.6-138.0 115.2 19.5 18.9 -7.2 74 76 A F E -AC 6 81A 0 7,-2.5 7,-2.9 -2,-0.4 2,-0.4 -0.923 35.8-123.6-145.5 166.7 20.1 15.1 -7.4 75 77 A Y E -AC 5 80A 69 -70,-3.6 -70,-2.9 -2,-0.3 2,-0.4 -0.912 9.9-171.4-115.3 141.5 18.7 11.7 -6.4 76 78 A I E > S- C 0 79A 3 3,-3.1 3,-1.8 -2,-0.4 2,-0.2 -0.943 76.7 -46.1-120.9 111.2 20.1 8.8 -4.4 77 79 A G T 3 S- 0 0 25 -74,-0.5 -72,-0.1 -2,-0.4 0, 0.0 -0.490 123.5 -23.6 62.5-135.1 17.6 6.0 -4.7 78 80 A Q T 3 S+ 0 0 142 -2,-0.2 2,-0.6 -3,-0.1 -1,-0.3 0.341 119.8 103.1 -87.4 8.5 14.1 7.3 -4.1 79 81 A V E < - C 0 76A 11 -3,-1.8 -3,-3.1 -23,-0.0 2,-0.3 -0.834 57.4-157.2-102.4 122.1 15.7 10.2 -2.1 80 82 A A E -BC 57 75A 0 -23,-2.9 -23,-2.3 -2,-0.6 2,-0.4 -0.732 4.5-163.6 -92.7 142.7 16.0 13.7 -3.6 81 83 A V E -BC 56 74A 1 -7,-2.9 -7,-2.5 -2,-0.3 2,-0.5 -0.996 5.3-171.9-129.5 124.6 18.5 16.2 -2.3 82 84 A L E +BC 55 73A 3 -27,-2.7 -27,-2.3 -2,-0.4 2,-0.4 -0.970 12.7 170.9-115.1 126.0 18.3 20.0 -3.1 83 85 A L E +BC 54 72A 1 -11,-2.6 -11,-2.0 -2,-0.5 2,-0.3 -0.968 14.4 134.5-142.3 121.4 21.4 22.0 -2.0 84 86 A F E -BC 53 71A 21 -31,-2.1 -31,-2.3 -2,-0.4 2,-0.4 -0.989 47.1-121.1-159.2 161.7 22.0 25.6 -2.9 85 87 A K E - 0 0 32 -15,-2.1 -18,-2.8 -2,-0.3 -15,-0.2 -0.909 46.4-105.9-105.4 146.3 23.0 29.1 -2.0 86 88 A S E C 0 66A 63 -35,-0.5 -20,-0.3 -2,-0.4 -18,-0.0 -0.398 360.0 360.0 -71.9 144.0 20.4 31.9 -2.6 87 89 A G 0 0 89 -22,-2.3 -21,-0.2 -20,-0.1 -1,-0.1 0.276 360.0 360.0 -80.1 360.0 20.6 34.4 -5.4