==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 07-JUL-07 2RLH . COMPND 2 MOLECULE: ANTIMICROBIAL PEPTIDE RP-1; . SOURCE 2 SYNTHETIC: YES; . AUTHOR S.BOURBIGOT,E.DODD,C.HORWOOD,V.BOOTH . 18 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2013.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 15 83.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 95 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 148.4 -5.7 12.9 -0.5 2 2 A L >> + 0 0 98 0, 0.0 3,-3.2 0, 0.0 4,-1.5 0.069 360.0 98.3 168.7 -31.9 -4.9 9.7 1.4 3 3 A Y H 3> S+ 0 0 152 1,-0.3 4,-0.9 2,-0.2 5,-0.0 0.632 83.9 61.9 -53.0 -12.1 -5.6 6.9 -1.0 4 4 A K H 3> S+ 0 0 94 2,-0.2 4,-1.0 3,-0.2 -1,-0.3 0.699 98.9 53.4 -88.4 -20.3 -1.8 7.0 -1.6 5 5 A K H <> S+ 0 0 129 -3,-3.2 4,-1.2 2,-0.2 -2,-0.2 0.913 113.2 41.4 -78.8 -43.6 -1.1 6.1 2.0 6 6 A F H X S+ 0 0 99 -4,-1.5 4,-0.8 1,-0.2 -2,-0.2 0.833 111.2 58.8 -71.7 -27.6 -3.3 3.0 1.9 7 7 A K H X S+ 0 0 81 -4,-0.9 4,-0.6 -5,-0.3 3,-0.2 0.846 97.0 61.1 -67.6 -31.8 -1.8 2.4 -1.6 8 8 A K H >X S+ 0 0 132 -4,-1.0 3,-1.6 1,-0.3 4,-1.3 0.936 102.9 50.0 -58.6 -44.0 1.6 2.3 0.1 9 9 A K H 3X S+ 0 0 134 -4,-1.2 4,-1.4 1,-0.3 -1,-0.3 0.764 104.6 58.8 -65.4 -22.6 0.2 -0.6 2.1 10 10 A L H 3X S+ 0 0 90 -4,-0.8 4,-1.2 -3,-0.2 -1,-0.3 0.614 97.2 63.0 -81.1 -10.1 -0.8 -2.0 -1.3 11 11 A L H