==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TOXIN 27-AUG-07 2RLW . COMPND 2 MOLECULE: PLNF; . SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS PLANTARUM; . AUTHOR N.FIMLAND,P.ROGNE,G.FIMLAND,J.NISSEN-MEYER,P.KRISTIANSEN . 34 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3445.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 26 76.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 17.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 20 58.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 136 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 166.0 2.1 0.0 -1.2 2 2 A F + 0 0 192 3,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.211 360.0 29.1-157.7 53.7 5.5 -1.3 -2.0 3 3 A H S S+ 0 0 168 3,-0.0 0, 0.0 0, 0.0 0, 0.0 0.130 99.0 73.4-176.9 -38.8 7.0 0.5 -5.0 4 4 A A S S+ 0 0 73 2,-0.1 0, 0.0 0, 0.0 0, 0.0 0.673 88.5 88.0 -66.4 -16.6 5.4 4.0 -5.1 5 5 A Y S S- 0 0 173 1,-0.0 2,-0.3 4,-0.0 3,-0.1 -0.093 72.9-139.4 -74.4 178.0 7.7 4.7 -2.1 6 6 A S >> - 0 0 80 1,-0.1 4,-2.3 2,-0.0 3,-2.0 -0.765 16.6-177.8-147.1 94.8 11.3 5.9 -2.3 7 7 A A H 3> S+ 0 0 44 1,-0.3 4,-2.6 -2,-0.3 5,-0.4 0.842 89.9 62.8 -59.1 -34.4 13.8 4.4 0.1 8 8 A R H 34 S+ 0 0 185 1,-0.2 -1,-0.3 2,-0.2 4,-0.2 0.637 112.1 37.9 -65.4 -13.6 16.3 6.8 -1.5 9 9 A G H <> S+ 0 0 27 -3,-2.0 4,-0.8 2,-0.1 -2,-0.2 0.714 111.9 55.6-105.5 -32.9 14.1 9.5 -0.1 10 10 A V H >X S+ 0 0 99 -4,-2.3 3,-0.5 2,-0.2 4,-0.5 0.944 114.6 39.6 -65.5 -49.9 13.1 7.9 3.2 11 11 A R H >X S+ 0 0 129 -4,-2.6 4,-2.3 1,-0.2 3,-1.4 0.888 110.0 59.3 -66.3 -40.9 16.7 7.5 4.3 12 12 A N H 34 S+ 0 0 86 -5,-0.4 -1,-0.2 1,-0.3 -2,-0.2 0.732 107.1 49.4 -59.6 -21.7 17.6 10.9 2.9 13 13 A N H 4 S+ 0 0 75 -5,-0.3 3,-1.5 2,-0.2 -1,-0.2 0.943 100.4 48.2 -73.5 -51.0 18.3 14.9 8.5 17 17 A A H 3X S+ 0 0 60 -4,-0.9 4,-1.2 -3,-0.4 -1,-0.2 0.639 104.8 65.7 -63.9 -13.3 17.0 13.8 11.9 18 18 A V H 3X S+ 0 0 66 -4,-1.0 4,-0.8 2,-0.2 -1,-0.3 0.799 89.7 64.7 -77.5 -31.0 20.6 12.7 12.5 19 19 A G H X< S+ 0 0 52 -3,-1.5 3,-0.8 -4,-0.6 4,-0.3 0.957 113.9 29.3 -54.8 -57.6 21.7 16.3 12.3 20 20 A P H >> S+ 0 0 61 0, 0.0 4,-2.3 0, 0.0 3,-1.8 0.748 105.0 78.5 -75.0 -25.4 19.9 17.4 15.4 21 21 A A H 3X S+ 0 0 37 -4,-1.2 4,-2.9 1,-0.3 5,-0.2 0.760 88.0 60.9 -53.2 -24.8 20.2 13.9 16.8 22 22 A D H S+ 0 0 158 -3,-1.8 4,-2.9 -4,-0.3 -2,-0.2 0.948 115.7 44.9 -72.2 -51.2 22.3 17.8 19.8 24 24 A V H X S+ 0 0 62 -4,-2.3 4,-1.7 1,-0.2 -2,-0.2 0.944 119.7 41.4 -56.6 -51.7 19.8 15.5 21.5 25 25 A I H X S+ 0 0 96 -4,-2.9 4,-2.7 1,-0.2 5,-0.2 0.835 114.1 54.6 -64.8 -33.4 22.4 12.8 22.0 26 26 A S H X S+ 0 0 56 -4,-1.6 4,-2.0 1,-0.2 -2,-0.2 0.859 107.2 49.4 -67.6 -36.9 24.9 15.6 22.9 27 27 A A H X S+ 0 0 47 -4,-2.9 4,-1.9 2,-0.2 -1,-0.2 0.820 111.3 50.9 -70.6 -32.0 22.5 16.8 25.6 28 28 A V H X S+ 0 0 80 -4,-1.7 4,-1.6 2,-0.2 -2,-0.2 0.956 117.9 35.9 -69.0 -52.7 22.2 13.2 26.8 29 29 A R H X S+ 0 0 162 -4,-2.7 4,-1.0 1,-0.2 -2,-0.2 0.765 117.0 56.4 -71.0 -26.4 25.9 12.6 27.0 30 30 A G H < S+ 0 0 22 -4,-2.0 4,-0.3 -5,-0.2 -1,-0.2 0.847 110.0 43.3 -72.8 -36.2 26.4 16.2 28.1 31 31 A F H < S+ 0 0 156 -4,-1.9 -2,-0.2 2,-0.2 -1,-0.2 0.767 102.1 68.5 -79.1 -28.1 24.0 15.8 31.1 32 32 A I H < S+ 0 0 129 -4,-1.6 -1,-0.2 1,-0.3 -2,-0.2 0.891 106.7 39.8 -56.8 -41.7 25.6 12.4 31.9 33 33 A H < 0 0 147 -4,-1.0 -1,-0.3 1,-0.2 -2,-0.2 0.613 360.0 360.0 -81.8 -14.2 28.7 14.3 32.9 34 34 A G 0 0 92 -4,-0.3 -2,-0.2 -3,-0.2 -1,-0.2 0.984 360.0 360.0 -55.0 360.0 26.5 17.0 34.5