==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 03-SEP-07 2RLY . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION REGULATOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR X.RAMIREZ-ESPAIN,L.RUIZ,P.MARTIN-MALPARTIDA,H.OSCHKINAT, . 45 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3891.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 44.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 17.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 15.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 W G 0 0 131 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 155.0 -5.1 -23.6 -1.4 2 2 W A - 0 0 107 1,-0.0 2,-0.7 0, 0.0 0, 0.0 -0.555 360.0-127.9 -87.3 147.7 -5.3 -20.3 -3.2 3 3 W T - 0 0 82 -2,-0.2 -1,-0.0 31,-0.1 0, 0.0 -0.867 29.6-136.1 -98.0 116.0 -3.5 -17.1 -2.1 4 4 W A - 0 0 70 -2,-0.7 2,-0.6 1,-0.1 -1,-0.0 -0.020 7.9-122.8 -66.3 166.7 -5.9 -14.2 -1.9 5 5 W V - 0 0 101 31,-0.1 31,-0.1 32,-0.0 3,-0.1 -0.933 36.3-167.3-113.8 104.1 -5.3 -10.6 -3.1 6 6 W S - 0 0 24 -2,-0.6 2,-0.9 1,-0.2 16,-0.0 0.065 40.8 -55.7 -80.6-167.8 -5.7 -8.3 -0.2 7 7 W E + 0 0 106 1,-0.0 16,-1.5 2,-0.0 17,-0.7 -0.634 59.7 178.2 -79.4 109.2 -6.1 -4.6 0.0 8 8 W W E +A 22 0A 43 -2,-0.9 2,-0.3 14,-0.2 14,-0.2 -0.896 0.9 179.1-123.8 99.4 -3.0 -3.2 -1.7 9 9 W T E -A 21 0A 54 12,-1.0 12,-1.5 -2,-0.6 2,-0.5 -0.720 20.3-139.2 -97.9 151.1 -2.8 0.5 -2.0 10 10 W E E -A 20 0A 148 -2,-0.3 2,-0.5 10,-0.2 10,-0.2 -0.941 19.0-170.4-112.0 124.6 0.0 2.4 -3.5 11 11 W Y E -A 19 0A 63 8,-2.8 8,-2.1 -2,-0.5 2,-0.7 -0.972 17.0-143.6-124.4 126.5 1.3 5.6 -1.8 12 12 W K E -A 18 0A 160 -2,-0.5 6,-0.2 6,-0.2 2,-0.1 -0.763 27.7-158.0 -87.3 113.3 3.7 8.1 -3.2 13 13 W T > - 0 0 20 4,-2.4 3,-1.5 -2,-0.7 -1,-0.0 -0.408 30.9-114.9 -92.5 165.6 5.9 9.3 -0.4 14 14 W A T 3 S+ 0 0 117 1,-0.3 -1,-0.1 2,-0.2 -2,-0.0 0.687 117.4 67.6 -70.3 -18.0 7.9 12.5 0.0 15 15 W D T 3 S- 0 0 99 2,-0.1 -1,-0.3 1,-0.0 3,-0.1 0.603 119.4-115.4 -72.6 -12.0 10.9 10.1 0.0 16 16 W G S < S+ 0 0 46 -3,-1.5 2,-0.3 1,-0.3 -2,-0.2 0.812 72.9 130.5 80.0 31.8 10.0 9.6 -3.6 17 17 W K - 0 0 94 -6,-0.1 -4,-2.4 2,-0.0 2,-0.8 -0.876 58.3-132.7-119.6 149.9 9.1 5.9 -3.0 18 18 W T E +A 12 0A 83 -2,-0.3 2,-0.3 -6,-0.2 -6,-0.2 -0.876 35.2 177.3 -98.8 100.7 6.1 3.8 -4.0 19 19 W Y E -A 11 0A 2 -8,-2.1 -8,-2.8 -2,-0.8 2,-0.4 -0.697 22.9-133.0-100.8 160.3 5.1 1.9 -0.9 20 20 W Y E -AB 10 29A 61 9,-3.3 9,-3.2 -2,-0.3 2,-0.5 -0.845 12.8-159.0-108.6 145.0 2.2 -0.5 -0.5 21 21 W Y E -A 9 0A 44 -12,-1.5 2,-1.0 -2,-0.4 -12,-1.0 -0.902 16.0-136.3-133.7 105.4 -0.1 -0.3 2.5 22 22 W N E >> -A 8 0A 11 -2,-0.5 5,-2.4 5,-0.4 4,-0.5 -0.436 17.7-175.7 -62.3 98.1 -2.1 -3.4 3.4 23 23 W N T 45S+ 0 0 91 -16,-1.5 -1,-0.2 -2,-1.0 -15,-0.1 0.486 70.5 89.6 -72.8 1.1 -5.5 -2.0 4.2 24 24 W R T 45S- 0 0 143 -17,-0.7 -1,-0.2 1,-0.2 -16,-0.1 0.991 115.5 -7.5 -55.6 -83.2 -6.1 -5.7 5.0 25 25 W T T 45S- 0 0 104 -3,-0.1 -1,-0.2 -18,-0.1 -2,-0.2 0.076 111.4 -91.3-100.2 20.6 -5.1 -5.8 8.7 26 26 W L T <5S+ 0 0 122 -4,-0.5 -3,-0.2 1,-0.2 2,-0.2 0.939 83.0 152.9 60.0 51.4 -3.9 -2.2 8.4 27 27 W E < - 0 0 96 -5,-2.4 -5,-0.4 2,-0.0 2,-0.3 -0.565 38.8-129.8-102.0 164.2 -0.5 -3.6 7.6 28 28 W S - 0 0 33 -7,-0.3 2,-0.3 -2,-0.2 -7,-0.3 -0.880 14.3-169.4-114.5 156.5 2.3 -2.0 5.6 29 29 W T B -B 20 0A 24 -9,-3.2 -9,-3.3 -2,-0.3 -2,-0.0 -0.863 6.4-173.9-143.8 108.6 4.3 -3.3 2.7 30 30 W W S S+ 0 0 102 -2,-0.3 2,-0.2 -11,-0.2 -1,-0.1 0.934 80.8 23.9 -69.9 -46.4 7.3 -1.3 1.5 31 31 W E S S- 0 0 156 1,-0.2 -11,-0.2 -12,-0.1 -12,-0.0 -0.518 119.4 -48.2-105.2-176.6 7.9 -3.6 -1.4 32 32 W K - 0 0 115 -2,-0.2 -1,-0.2 1,-0.1 -2,-0.1 -0.261 63.0-119.8 -59.9 125.3 5.4 -5.8 -3.3 33 33 W P > - 0 0 5 0, 0.0 3,-1.0 0, 0.0 -1,-0.1 -0.149 16.4-119.1 -54.9 157.1 3.3 -8.0 -0.9 34 34 W Q T 3 S+ 0 0 172 1,-0.2 -2,-0.1 3,-0.0 -31,-0.1 0.797 119.9 52.9 -67.8 -27.9 3.5 -11.8 -1.2 35 35 W E T 3 S+ 0 0 34 2,-0.1 2,-0.8 -30,-0.0 -1,-0.2 0.364 83.4 112.9 -88.0 2.5 -0.2 -11.6 -2.0 36 36 W L < 0 0 42 -3,-1.0 -31,-0.1 -31,-0.1 -32,-0.0 -0.699 360.0 360.0 -81.4 108.5 0.5 -9.1 -4.8 37 37 W K 0 0 191 -2,-0.8 -2,-0.1 0, 0.0 -3,-0.0 -0.918 360.0 360.0-105.6 360.0 -0.3 -10.8 -8.1 38 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 39 103 P P 0 0 178 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 112.9 -9.1 10.4 1.5 40 104 P T - 0 0 127 1,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.740 360.0-112.6 -99.3 148.7 -6.0 11.1 3.5 41 105 P P - 0 0 80 0, 0.0 -1,-0.0 0, 0.0 -30,-0.0 -0.484 23.7-121.9 -78.0 148.8 -2.7 9.1 3.1 42 106 P P - 0 0 34 0, 0.0 2,-0.2 0, 0.0 -21,-0.0 -0.594 36.6-104.3 -78.2 149.1 -1.4 6.8 5.9 43 107 P P - 0 0 108 0, 0.0 -30,-0.0 0, 0.0 0, 0.0 -0.553 40.9-105.9 -77.7 148.7 2.1 7.8 7.1 44 108 P L - 0 0 58 -2,-0.2 -23,-0.0 1,-0.1 -16,-0.0 -0.362 30.0-115.8 -78.2 148.4 4.9 5.5 5.8 45 109 P P 0 0 25 0, 0.0 -1,-0.1 0, 0.0 -16,-0.0 -0.450 360.0 360.0 -77.8 154.3 6.7 2.9 8.0 46 110 P P 0 0 185 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.900 360.0 360.0 -91.7 360.0 10.4 3.1 8.9