==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 14-NOV-07 2RMR . COMPND 2 MOLECULE: PAIRED AMPHIPATHIC HELIX PROTEIN SIN3A; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR S.C.SAHU,K.A.SWANSON,R.S.KANG,K.HUANG,K.BRUBAKER,K.RATCLIFF, . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5765.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 69.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 38 53.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 119 A Q 0 0 204 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -53.8 -17.2 10.0 -6.8 2 120 A R + 0 0 223 1,-0.1 3,-0.0 2,-0.0 0, 0.0 0.954 360.0 143.8 59.5 93.6 -14.6 9.3 -4.2 3 121 A L + 0 0 124 1,-0.0 2,-1.4 0, 0.0 -1,-0.1 0.315 33.1 109.7-137.7 -1.3 -13.6 12.6 -2.6 4 122 A K + 0 0 153 2,-0.0 2,-0.4 4,-0.0 -1,-0.0 -0.662 39.7 143.1 -84.4 91.1 -13.0 11.5 1.0 5 123 A V + 0 0 91 -2,-1.4 0, 0.0 1,-0.1 0, 0.0 -0.939 11.4 113.9-136.2 112.8 -9.2 11.8 1.3 6 124 A E S S+ 0 0 131 -2,-0.4 3,-0.1 0, 0.0 -1,-0.1 0.481 88.7 20.0-137.5 -62.2 -7.5 13.0 4.5 7 125 A D S > S+ 0 0 116 1,-0.2 4,-0.5 2,-0.1 3,-0.4 0.272 108.6 80.8 -99.7 8.9 -5.3 10.3 6.2 8 126 A A H > S+ 0 0 38 1,-0.2 4,-1.0 2,-0.2 3,-0.3 0.847 88.8 51.2 -81.3 -37.3 -5.1 8.3 3.1 9 127 A L H > S+ 0 0 113 1,-0.2 4,-0.5 2,-0.1 -1,-0.2 0.229 94.6 80.9 -84.4 14.8 -2.3 10.3 1.5 10 128 A S H > S+ 0 0 61 -3,-0.4 4,-1.1 2,-0.1 -1,-0.2 0.931 99.6 29.6 -84.3 -53.1 -0.4 10.0 4.8 11 129 A Y H X S+ 0 0 9 -4,-0.5 4,-2.1 -3,-0.3 5,-0.2 0.907 116.8 58.6 -73.7 -43.9 1.1 6.5 4.3 12 130 A L H X S+ 0 0 39 -4,-1.0 4,-2.0 1,-0.2 5,-0.2 0.889 103.8 53.4 -52.7 -42.9 1.3 6.7 0.5 13 131 A D H X S+ 0 0 84 -4,-0.5 4,-1.8 1,-0.2 -1,-0.2 0.919 106.2 52.2 -59.4 -45.1 3.5 9.8 0.8 14 132 A Q H X S+ 0 0 89 -4,-1.1 4,-2.3 1,-0.2 5,-0.2 0.896 108.2 51.5 -58.3 -42.3 5.9 8.0 3.1 15 133 A V H X S+ 0 0 1 -4,-2.1 4,-1.4 1,-0.2 -1,-0.2 0.891 109.9 48.8 -62.3 -40.7 6.2 5.1 0.5 16 134 A K H < S+ 0 0 118 -4,-2.0 -1,-0.2 -5,-0.2 -2,-0.2 0.787 110.4 53.3 -70.2 -28.0 7.0 7.6 -2.2 17 135 A L H < S+ 0 0 115 -4,-1.8 3,-0.2 -5,-0.2 -2,-0.2 0.960 110.2 43.2 -71.4 -53.6 9.6 9.3 -0.1 18 136 A Q H < S+ 0 0 111 -4,-2.3 2,-0.5 1,-0.2 -2,-0.2 0.778 124.0 41.6 -63.5 -26.7 11.6 6.1 0.8 19 137 A F < + 0 0 47 -4,-1.4 -1,-0.2 -5,-0.2 7,-0.1 -0.881 63.7 129.6-127.8 100.1 11.3 5.1 -2.9 20 138 A G S S+ 0 0 66 -2,-0.5 -1,-0.1 -3,-0.2 -2,-0.1 0.508 70.8 57.1-123.0 -13.5 11.8 7.8 -5.4 21 139 A S S S+ 0 0 106 1,-0.2 3,-0.1 2,-0.0 -2,-0.1 0.750 104.0 54.6 -89.6 -28.3 14.3 6.3 -7.8 22 140 A Q >> + 0 0 103 1,-0.1 3,-1.0 2,-0.0 4,-0.8 -0.840 57.1 175.8-111.3 94.9 12.2 3.2 -8.6 23 141 A P H 3> S+ 0 0 96 0, 0.0 4,-2.0 0, 0.0 5,-0.2 0.615 76.0 73.0 -71.2 -11.7 8.8 4.2 -9.9 24 142 A Q H 3> S+ 0 0 145 2,-0.2 4,-1.6 1,-0.2 5,-0.1 0.808 92.6 54.1 -71.9 -30.3 8.0 0.5 -10.5 25 143 A V H <> S+ 0 0 29 -3,-1.0 4,-2.0 2,-0.2 -1,-0.2 0.941 110.9 43.2 -69.1 -48.9 7.7 -0.1 -6.7 26 144 A Y H X S+ 0 0 43 -4,-0.8 4,-2.1 1,-0.2 -2,-0.2 0.927 114.8 49.8 -63.0 -46.4 5.1 2.6 -6.2 27 145 A N H X S+ 0 0 108 -4,-2.0 4,-2.1 1,-0.2 -1,-0.2 0.861 109.9 52.7 -60.7 -36.0 3.1 1.7 -9.3 28 146 A D H X S+ 0 0 69 -4,-1.6 4,-2.3 2,-0.2 -1,-0.2 0.894 107.2 51.0 -66.9 -41.1 3.2 -2.0 -8.1 29 147 A F H X S+ 0 0 4 -4,-2.0 4,-2.2 1,-0.2 -2,-0.2 0.889 110.1 50.2 -63.6 -40.1 1.8 -1.0 -4.7 30 148 A L H X S+ 0 0 62 -4,-2.1 4,-2.1 2,-0.2 -2,-0.2 0.925 110.0 49.9 -64.2 -45.7 -1.0 0.9 -6.4 31 149 A D H X S+ 0 0 81 -4,-2.1 4,-2.0 1,-0.2 -2,-0.2 0.941 111.0 48.7 -58.2 -50.6 -1.9 -2.0 -8.6 32 150 A I H X S+ 0 0 7 -4,-2.3 4,-2.1 1,-0.2 -1,-0.2 0.912 110.6 50.9 -56.5 -45.9 -2.0 -4.5 -5.8 33 151 A M H X S+ 0 0 50 -4,-2.2 4,-2.2 1,-0.2 -1,-0.2 0.879 109.0 51.5 -60.7 -39.0 -4.2 -2.2 -3.7 34 152 A K H X S+ 0 0 152 -4,-2.1 4,-1.1 1,-0.2 -1,-0.2 0.862 108.2 52.0 -66.3 -36.5 -6.6 -1.8 -6.6 35 153 A E H <>S+ 0 0 64 -4,-2.0 5,-2.1 2,-0.2 6,-0.7 0.899 110.3 47.9 -66.7 -41.6 -6.9 -5.6 -7.0 36 154 A F H ><5S+ 0 0 37 -4,-2.1 3,-1.6 1,-0.2 -2,-0.2 0.913 111.1 49.8 -65.6 -44.0 -7.7 -6.0 -3.3 37 155 A K H 3<5S+ 0 0 124 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.749 103.5 61.8 -66.6 -23.7 -10.4 -3.3 -3.4 38 156 A S T 3<5S- 0 0 80 -4,-1.1 -1,-0.3 -5,-0.2 -2,-0.2 0.265 114.4-118.6 -85.8 12.3 -11.8 -5.0 -6.5 39 157 A Q T < 5S+ 0 0 167 -3,-1.6 -3,-0.2 1,-0.1 -2,-0.1 0.707 81.0 126.8 57.8 19.5 -12.5 -8.1 -4.3 40 158 A S S - 0 0 120 -2,-0.2 4,-1.5 1,-0.1 5,-0.2 -0.425 36.6 -94.2-105.3-178.2 -8.2 -11.9 -0.2 43 161 A T H > S+ 0 0 68 1,-0.2 4,-2.2 2,-0.2 3,-0.2 0.948 123.1 50.6 -63.1 -51.8 -6.8 -10.3 2.9 44 162 A P H > S+ 0 0 91 0, 0.0 4,-1.9 0, 0.0 -1,-0.2 0.743 107.0 60.5 -59.6 -21.5 -3.7 -12.6 3.2 45 163 A G H > S+ 0 0 23 2,-0.2 4,-2.3 -3,-0.2 -2,-0.2 0.952 107.9 38.4 -71.3 -51.3 -3.0 -11.8 -0.4 46 164 A V H X S+ 0 0 0 -4,-1.5 4,-2.2 -3,-0.2 5,-0.2 0.864 118.3 50.9 -68.1 -36.3 -2.6 -8.0 -0.0 47 165 A I H X S+ 0 0 73 -4,-2.2 4,-1.9 2,-0.2 -1,-0.2 0.910 112.8 45.0 -67.5 -43.3 -0.7 -8.4 3.3 48 166 A S H X S+ 0 0 58 -4,-1.9 4,-2.2 -5,-0.2 5,-0.2 0.908 113.7 49.7 -67.3 -43.4 1.7 -11.0 1.8 49 167 A R H X S+ 0 0 93 -4,-2.3 4,-1.9 1,-0.2 -2,-0.2 0.931 114.1 44.0 -62.2 -48.2 2.3 -9.0 -1.3 50 168 A V H X S+ 0 0 3 -4,-2.2 4,-1.9 2,-0.2 -1,-0.2 0.871 111.1 56.1 -65.1 -36.9 3.0 -5.7 0.6 51 169 A S H < S+ 0 0 53 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.917 113.4 39.1 -61.1 -45.1 5.2 -7.6 3.1 52 170 A Q H >< S+ 0 0 138 -4,-2.2 3,-0.7 1,-0.2 -1,-0.2 0.770 108.7 64.9 -75.7 -26.9 7.4 -9.0 0.3 53 171 A L H 3< S+ 0 0 40 -4,-1.9 2,-0.7 1,-0.3 -2,-0.2 0.917 106.3 41.7 -61.8 -45.1 7.2 -5.6 -1.5 54 172 A F T >< S+ 0 0 1 -4,-1.9 2,-1.0 -5,-0.1 3,-0.6 -0.522 78.0 168.7-103.5 64.1 9.0 -3.8 1.3 55 173 A K T < S+ 0 0 179 -3,-0.7 -3,-0.1 -2,-0.7 -4,-0.0 -0.673 71.4 18.5 -81.1 103.8 11.7 -6.4 2.1 56 174 A G T 3 S+ 0 0 57 -2,-1.0 -1,-0.2 0, 0.0 3,-0.1 0.034 106.2 83.6 127.1 -26.2 14.2 -4.7 4.4 57 175 A H X> + 0 0 80 -3,-0.6 4,-1.2 1,-0.1 3,-0.5 -0.807 46.4 177.3-112.4 89.5 12.1 -1.8 5.6 58 176 A P H 3> S+ 0 0 84 0, 0.0 4,-2.3 0, 0.0 5,-0.2 0.623 75.3 73.7 -64.8 -11.8 9.9 -2.9 8.5 59 177 A D H 3> S+ 0 0 103 2,-0.2 4,-1.9 1,-0.2 5,-0.1 0.968 98.8 39.9 -66.2 -55.1 8.7 0.7 8.8 60 178 A L H <> S+ 0 0 0 -3,-0.5 4,-2.2 2,-0.2 5,-0.2 0.849 115.0 55.5 -63.2 -35.2 6.5 0.6 5.7 61 179 A I H X S+ 0 0 52 -4,-1.2 4,-2.0 1,-0.2 -2,-0.2 0.961 110.2 42.5 -62.4 -53.7 5.4 -2.9 6.6 62 180 A M H X S+ 0 0 129 -4,-2.3 4,-2.0 1,-0.2 -1,-0.2 0.822 111.9 58.4 -62.8 -31.4 4.2 -1.9 10.1 63 181 A G H < S+ 0 0 19 -4,-1.9 4,-0.2 1,-0.2 -1,-0.2 0.930 109.8 40.2 -64.6 -46.8 2.7 1.2 8.6 64 182 A F H X S+ 0 0 9 -4,-2.2 4,-0.7 1,-0.2 3,-0.4 0.814 111.2 59.9 -71.7 -31.0 0.4 -0.7 6.2 65 183 A N H >< S+ 0 0 107 -4,-2.0 3,-0.7 1,-0.2 -2,-0.2 0.922 110.6 39.4 -62.6 -45.5 -0.4 -3.3 8.8 66 184 A T T 3< S+ 0 0 125 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.463 112.8 59.7 -82.9 -1.8 -1.9 -0.7 11.2 67 185 A F T 34 S+ 0 0 84 -3,-0.4 -1,-0.2 -4,-0.2 -2,-0.2 0.509 77.4 116.9-100.9 -9.6 -3.4 1.0 8.1 68 186 A L S << S- 0 0 48 -4,-0.7 3,-0.1 -3,-0.7 -3,-0.0 -0.319 72.7-106.7 -61.0 139.6 -5.4 -2.1 7.2 69 187 A P - 0 0 73 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 -0.160 47.7 -76.6 -64.5 161.8 -9.3 -1.6 7.3 70 188 A P 0 0 137 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.465 360.0 360.0 -64.9 112.6 -11.4 -3.2 10.1 71 189 A G 0 0 150 -2,-0.5 0, 0.0 -3,-0.1 0, 0.0 0.025 360.0 360.0-101.7 360.0 -11.8 -6.9 9.3