==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 22-MAR-08 2ROH . COMPND 2 MOLECULE: TELOMERE BINDING PROTEIN-1; . SOURCE 2 ORGANISM_SCIENTIFIC: ORYZA SATIVA; . AUTHOR W.LEE,S.KO . 122 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 11188.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 46.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 47 38.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 140 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 71.8 2.1 0.0 -1.2 2 2 A S - 0 0 79 1,-0.1 2,-0.0 0, 0.0 0, 0.0 -0.777 360.0 -94.4-116.0 160.6 5.7 0.5 -0.2 3 3 A P - 0 0 98 0, 0.0 2,-0.3 0, 0.0 3,-0.2 -0.280 36.0-149.3 -69.8 156.1 9.0 -0.5 -1.8 4 4 A F + 0 0 183 1,-0.2 0, 0.0 -2,-0.0 0, 0.0 -0.942 66.9 18.5-129.8 151.3 10.8 -3.7 -0.8 5 5 A A S S+ 0 0 110 -2,-0.3 -1,-0.2 1,-0.2 3,-0.0 0.959 84.1 156.4 56.9 55.7 14.5 -4.7 -0.6 6 6 A D - 0 0 79 -3,-0.2 -1,-0.2 1,-0.1 0, 0.0 -0.744 53.0-125.9-111.8 160.0 15.8 -1.1 -0.6 7 7 A P - 0 0 114 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.874 29.8-154.2 -69.7 -39.1 19.1 0.4 0.6 8 8 A N - 0 0 129 1,-0.1 -2,-0.0 -3,-0.0 -3,-0.0 0.951 15.6-154.5 61.5 51.7 17.3 3.0 2.8 9 9 A S - 0 0 102 1,-0.1 -1,-0.1 2,-0.1 2,-0.1 -0.261 9.3-126.6 -58.5 141.4 20.2 5.5 2.6 10 10 A L - 0 0 162 1,-0.1 -1,-0.1 3,-0.0 -2,-0.0 -0.263 21.0-107.0 -83.7 174.4 20.5 7.9 5.6 11 11 A A - 0 0 101 -2,-0.1 -1,-0.1 0, 0.0 -2,-0.1 0.751 49.8-139.9 -73.1 -24.5 20.6 11.7 5.5 12 12 A L - 0 0 154 1,-0.0 2,-0.2 2,-0.0 -3,-0.0 0.903 22.9-164.8 62.1 102.7 24.3 11.5 6.5 13 13 A A - 0 0 95 0, 0.0 2,-0.4 0, 0.0 -3,-0.0 -0.474 11.8-124.8-108.4-178.7 25.2 14.2 9.0 14 14 A N - 0 0 157 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 -0.994 15.1-155.1-133.8 138.0 28.4 15.7 10.3 15 15 A V - 0 0 117 -2,-0.4 2,-0.0 1,-0.1 0, 0.0 -0.786 26.3-101.7-111.5 154.8 29.8 16.1 13.8 16 16 A P + 0 0 121 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.257 40.0 176.1 -69.7 158.2 32.3 18.6 15.3 17 17 A L - 0 0 170 2,-0.0 2,-0.1 -2,-0.0 0, 0.0 -0.959 16.9-144.4-164.4 145.5 35.9 17.7 16.0 18 18 A S - 0 0 106 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.373 12.2-142.1-103.1-176.1 39.1 19.3 17.2 19 19 A R - 0 0 215 -2,-0.1 2,-0.3 2,-0.0 -2,-0.0 -0.992 11.7-172.7-152.1 142.7 42.8 18.9 16.3 20 20 A S + 0 0 110 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.973 9.5 163.2-137.5 151.1 46.1 18.9 18.2 21 21 A K - 0 0 180 -2,-0.3 -2,-0.0 0, 0.0 0, 0.0 -0.943 19.6-143.2-155.6 173.8 49.8 18.7 17.2 22 22 A R - 0 0 223 -2,-0.3 -2,-0.0 1,-0.0 0, 0.0 -0.994 17.0-125.0-150.4 140.6 53.3 19.3 18.5 23 23 A P - 0 0 93 0, 0.0 2,-0.3 0, 0.0 -1,-0.0 0.095 25.9-125.1 -69.7-172.4 56.6 20.6 17.0 24 24 A D - 0 0 140 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.969 17.1-163.9-140.2 154.9 60.0 18.9 16.9 25 25 A F + 0 0 136 -2,-0.3 2,-0.3 61,-0.1 0, 0.0 -0.875 13.9 155.4-134.5 166.6 63.5 19.7 18.0 26 26 A G - 0 0 43 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.955 27.4-124.8-170.2-173.9 67.0 18.4 17.4 27 27 A Q - 0 0 190 -2,-0.3 2,-0.1 0, 0.0 -2,-0.0 -0.942 14.8-152.9-156.2 130.4 70.8 19.1 17.4 28 28 A R - 0 0 162 -2,-0.3 3,-0.1 1,-0.2 -2,-0.0 -0.385 39.8 -72.1 -95.7 176.1 73.5 18.7 14.8 29 29 A R - 0 0 182 1,-0.2 2,-0.8 -2,-0.1 -1,-0.2 0.095 67.8 -72.6 -57.2 177.8 77.2 18.1 15.1 30 30 A I - 0 0 162 1,-0.0 -1,-0.2 0, 0.0 2,-0.1 -0.689 57.2-168.0 -82.1 111.7 79.6 20.8 16.3 31 31 A R - 0 0 67 -2,-0.8 -1,-0.0 -3,-0.1 45,-0.0 -0.320 16.5-112.1 -91.2 176.9 80.0 23.4 13.6 32 32 A R - 0 0 212 -2,-0.1 62,-0.1 1,-0.1 2,-0.1 -0.731 34.3 -90.7-110.8 160.5 82.5 26.2 13.3 33 33 A P - 0 0 109 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.407 41.1-156.0 -69.8 141.4 82.1 30.0 13.4 34 34 A F - 0 0 62 -2,-0.1 2,-0.3 4,-0.0 3,-0.0 -0.762 13.3-114.7-116.9 163.8 81.5 31.9 10.2 35 35 A T > - 0 0 86 -2,-0.3 4,-3.3 1,-0.1 5,-0.3 -0.701 23.9-118.3 -98.8 150.5 82.1 35.5 9.0 36 36 A V H > S+ 0 0 67 -2,-0.3 4,-1.9 1,-0.2 5,-0.1 0.854 118.5 45.5 -51.6 -37.8 79.4 38.0 8.0 37 37 A A H > S+ 0 0 50 2,-0.2 4,-2.5 1,-0.2 5,-0.3 0.934 112.6 48.2 -72.4 -48.3 80.9 38.1 4.6 38 38 A E H > S+ 0 0 102 1,-0.2 4,-2.3 2,-0.2 -2,-0.2 0.901 115.7 45.5 -59.2 -42.8 81.3 34.3 4.2 39 39 A V H X S+ 0 0 3 -4,-3.3 4,-3.2 2,-0.2 5,-0.3 0.914 110.8 53.0 -67.5 -44.2 77.7 33.8 5.4 40 40 A E H X S+ 0 0 78 -4,-1.9 4,-2.1 -5,-0.3 -2,-0.2 0.945 115.1 39.9 -56.3 -52.4 76.4 36.5 3.1 41 41 A L H X S+ 0 0 48 -4,-2.5 4,-1.9 2,-0.2 -1,-0.2 0.902 115.6 52.5 -64.8 -42.1 78.0 35.1 0.0 42 42 A L H X S+ 0 0 21 -4,-2.3 4,-1.8 -5,-0.3 5,-0.2 0.927 111.0 46.4 -59.9 -47.1 77.2 31.5 1.0 43 43 A V H X S+ 0 0 0 -4,-3.2 4,-2.8 1,-0.2 5,-0.2 0.895 111.4 51.7 -62.9 -41.5 73.5 32.4 1.6 44 44 A E H X S+ 0 0 116 -4,-2.1 4,-2.8 -5,-0.3 -1,-0.2 0.822 106.1 56.8 -65.1 -31.5 73.3 34.2 -1.7 45 45 A A H X S+ 0 0 0 -4,-1.9 4,-0.6 2,-0.2 -2,-0.2 0.943 116.6 32.3 -65.4 -49.5 74.8 31.2 -3.5 46 46 A V H X S+ 0 0 4 -4,-1.8 4,-1.0 2,-0.2 -2,-0.2 0.808 122.1 50.7 -77.5 -31.2 72.1 28.8 -2.3 47 47 A E H < S+ 0 0 67 -4,-2.8 -2,-0.2 -5,-0.2 -3,-0.2 0.911 99.6 62.5 -72.5 -44.2 69.4 31.5 -2.4 48 48 A H H < S+ 0 0 118 -4,-2.8 -1,-0.2 1,-0.3 -2,-0.2 0.818 120.8 26.8 -50.5 -32.7 70.2 32.6 -5.9 49 49 A L H < S- 0 0 48 -4,-0.6 2,-2.3 -5,-0.2 -1,-0.3 0.532 93.0-157.4-106.3 -12.6 69.2 29.1 -7.0 50 50 A G S < S- 0 0 4 -4,-1.0 -1,-0.2 1,-0.2 -2,-0.1 -0.445 73.8 -16.7 72.1 -77.9 66.9 28.4 -4.1 51 51 A T S S+ 0 0 97 -2,-2.3 -1,-0.2 -4,-0.1 3,-0.1 -0.323 109.1 91.0-160.3 66.3 67.0 24.7 -4.3 52 52 A G S S+ 0 0 52 1,-0.3 2,-0.5 -6,-0.2 -2,-0.1 0.385 82.4 3.8-123.3-101.3 68.4 23.3 -7.5 53 53 A R > - 0 0 164 1,-0.1 4,-0.6 -4,-0.0 3,-0.4 -0.840 47.4-155.9-100.5 129.3 72.0 22.5 -8.3 54 54 A W H >> S+ 0 0 118 -2,-0.5 4,-1.9 1,-0.2 3,-0.6 0.768 90.5 71.4 -70.8 -25.9 74.7 22.8 -5.6 55 55 A R H 3> S+ 0 0 120 1,-0.3 4,-2.0 2,-0.2 -1,-0.2 0.907 94.9 51.8 -56.3 -44.5 77.3 23.3 -8.3 56 56 A D H 3> S+ 0 0 67 -3,-0.4 4,-2.9 1,-0.2 -1,-0.3 0.783 106.3 57.4 -63.6 -27.0 76.0 26.8 -9.1 57 57 A V H - 0 0 61 1,-0.2 4,-2.0 -15,-0.0 -1,-0.2 -0.987 43.6-108.1-161.2 155.8 82.4 21.6 -1.4 70 70 A Y H >> S+ 0 0 89 -2,-0.3 4,-2.1 1,-0.2 3,-0.7 0.959 122.0 41.7 -49.9 -61.7 79.1 22.0 -3.1 71 71 A V H 3> S+ 0 0 84 1,-0.2 4,-3.2 2,-0.2 5,-0.3 0.824 108.2 64.5 -56.9 -32.3 77.1 20.0 -0.6 72 72 A D H 3> S+ 0 0 32 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.914 107.0 40.5 -58.0 -45.5 79.2 21.6 2.1 73 73 A L H - 0 0 31 1,-0.1 4,-1.2 3,-0.1 -1,-0.1 -0.018 50.1-118.1 -52.6 160.6 63.2 28.5 19.5 88 88 A P T 4 S+ 0 0 106 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.903 113.4 53.8 -69.8 -43.3 65.1 31.6 20.6 89 89 A Q T 4 S+ 0 0 150 1,-0.2 -2,-0.1 3,-0.1 -3,-0.0 0.782 114.7 43.0 -62.9 -26.9 66.6 30.0 23.7 90 90 A Q T 4 S+ 0 0 93 1,-0.1 2,-2.5 -7,-0.0 -1,-0.2 0.695 90.3 91.5 -90.5 -22.9 68.0 27.3 21.5 91 91 A R < + 0 0 89 -4,-1.2 2,-0.4 1,-0.1 -1,-0.1 -0.448 46.6 142.9 -74.5 73.7 69.1 29.7 18.8 92 92 A R + 0 0 209 -2,-2.5 -1,-0.1 3,-0.0 -8,-0.1 -0.518 23.3 142.4-113.7 62.7 72.6 30.1 20.2 93 93 A G - 0 0 54 -2,-0.4 3,-0.1 1,-0.2 -2,-0.0 -0.163 57.5 -48.8 -90.6-172.1 74.7 30.4 17.0 94 94 A A S S- 0 0 27 1,-0.2 2,-2.2 -62,-0.1 -1,-0.2 -0.029 73.7 -82.8 -53.5 160.6 77.7 32.5 16.1 95 95 A P S S+ 0 0 136 0, 0.0 -1,-0.2 0, 0.0 -3,-0.0 -0.431 79.6 141.4 -69.7 77.5 77.6 36.2 16.8 96 96 A V - 0 0 40 -2,-2.2 -3,-0.1 -3,-0.1 5,-0.0 -0.861 53.1 -99.2-122.0 156.5 75.7 37.3 13.6 97 97 A P >> - 0 0 44 0, 0.0 3,-1.0 0, 0.0 4,-0.7 -0.272 31.4-114.5 -69.7 156.9 73.0 39.9 12.9 98 98 A Q H 3> S+ 0 0 148 1,-0.2 4,-2.1 2,-0.2 3,-0.5 0.786 110.0 75.6 -61.9 -27.4 69.3 38.9 12.7 99 99 A E H 3> S+ 0 0 101 1,-0.3 4,-2.8 2,-0.2 5,-0.3 0.896 90.1 55.5 -50.9 -45.0 69.5 39.9 9.0 100 100 A L H <> S+ 0 0 1 -3,-1.0 4,-1.9 1,-0.2 -1,-0.3 0.893 111.3 43.3 -56.3 -42.1 71.3 36.7 8.3 101 101 A L H X S+ 0 0 23 -4,-0.7 4,-1.8 -3,-0.5 -1,-0.2 0.769 113.2 53.3 -75.1 -26.4 68.5 34.7 9.9 102 102 A D H X S+ 0 0 115 -4,-2.1 4,-2.2 2,-0.2 5,-0.2 0.856 111.7 44.1 -75.9 -36.8 65.9 36.9 8.1 103 103 A R H X S+ 0 0 73 -4,-2.8 4,-2.0 -5,-0.2 5,-0.2 0.893 117.4 44.5 -74.5 -41.7 67.4 36.3 4.7 104 104 A V H X S+ 0 0 0 -4,-1.9 4,-1.8 -5,-0.3 -2,-0.2 0.889 119.4 42.4 -69.7 -40.4 67.9 32.6 5.2 105 105 A L H X S+ 0 0 52 -4,-1.8 4,-2.2 2,-0.2 5,-0.2 0.955 116.0 46.8 -71.0 -52.3 64.4 32.2 6.7 106 106 A A H X S+ 0 0 25 -4,-2.2 4,-2.7 -5,-0.2 -2,-0.2 0.929 115.8 45.8 -55.4 -49.2 62.6 34.4 4.2 107 107 A A H X S+ 0 0 4 -4,-2.0 4,-2.5 -5,-0.2 5,-0.3 0.908 108.2 57.2 -61.4 -43.9 64.3 32.8 1.2 108 108 A Q H X S+ 0 0 76 -4,-1.8 4,-1.1 1,-0.2 -1,-0.2 0.912 114.3 38.1 -53.9 -46.5 63.6 29.3 2.6 109 109 A A H X S+ 0 0 19 -4,-2.2 4,-1.4 2,-0.2 5,-0.2 0.878 111.0 59.8 -73.0 -39.5 59.9 30.0 2.7 110 110 A Y H < S+ 0 0 127 -4,-2.7 -2,-0.2 -5,-0.2 -1,-0.2 0.896 116.6 33.1 -55.5 -43.0 59.9 31.9 -0.5 111 111 A W H < S+ 0 0 139 -4,-2.5 -1,-0.2 -5,-0.1 -2,-0.2 0.666 110.4 72.0 -86.9 -19.1 61.3 28.9 -2.4 112 112 A S H < S- 0 0 72 -4,-1.1 -2,-0.2 -5,-0.3 -3,-0.2 0.993 126.0 -45.5 -58.2 -77.1 59.4 26.5 -0.1 113 113 A V S < S- 0 0 135 -4,-1.4 -3,-0.1 2,-0.0 -4,-0.1 0.620 106.6 -38.1-123.3 -70.2 55.8 27.0 -1.3 114 114 A D S S- 0 0 108 1,-0.3 2,-0.3 -5,-0.2 -2,-0.0 0.563 93.3 -60.7-126.8 -72.7 54.7 30.7 -1.7 115 115 A S - 0 0 58 -4,-0.1 2,-0.5 2,-0.0 -1,-0.3 -0.970 40.9 -97.3-170.2 177.3 56.1 33.1 0.9 116 116 A S S S+ 0 0 82 -2,-0.3 2,-0.3 -10,-0.1 -6,-0.1 -0.954 83.9 36.7-117.9 120.3 56.3 34.1 4.6 117 117 A G + 0 0 46 -2,-0.5 -2,-0.0 1,-0.1 0, 0.0 -0.836 33.9 169.2 152.4-110.4 54.0 36.7 6.0 118 118 A R + 0 0 232 -2,-0.3 -1,-0.1 2,-0.1 3,-0.1 0.903 58.9 101.2 62.4 42.5 50.4 37.4 5.0 119 119 A I + 0 0 142 1,-0.0 2,-0.2 0, 0.0 -1,-0.1 0.624 58.9 75.8-123.0 -35.2 49.9 39.8 7.9 120 120 A V - 0 0 125 1,-0.0 2,-0.2 2,-0.0 -2,-0.1 -0.585 51.3-176.3 -84.4 144.6 50.2 43.3 6.4 121 121 A T 0 0 135 -2,-0.2 -1,-0.0 -3,-0.1 0, 0.0 -0.596 360.0 360.0-142.5 77.1 47.3 44.7 4.4 122 122 A L 0 0 226 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 -0.209 360.0 360.0 -57.1 360.0 48.2 48.1 2.9