==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 28-JUL-08 2RPS . COMPND 2 MOLECULE: CHEMOKINE; . SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDALETIA SEPARATA; . AUTHOR M.KAMIYA,S.NAKATOGAWA,Y.ODA,T.KAMIJIMA,T.AIZAWA,M.DEMURA, . 32 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3812.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 12 37.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 12.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 21.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 107 0, 0.0 2,-1.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 34.5 -16.2 -0.8 -3.2 2 2 A V + 0 0 142 4,-0.0 2,-0.3 2,-0.0 3,-0.1 -0.681 360.0 100.0 -87.1 91.2 -17.6 -1.6 -6.6 3 3 A Q S S- 0 0 113 -2,-1.3 0, 0.0 1,-0.1 0, 0.0 -0.976 78.2-110.9-162.2 168.4 -14.8 -0.7 -9.0 4 4 A I S S+ 0 0 167 -2,-0.3 -1,-0.1 1,-0.0 -2,-0.0 0.821 114.1 43.3 -76.4 -32.6 -11.9 -2.2 -11.0 5 5 A L S S+ 0 0 137 -3,-0.1 -2,-0.0 2,-0.0 -1,-0.0 0.982 76.4 168.0 -74.7 -77.1 -9.3 -0.6 -8.8 6 6 A R - 0 0 142 1,-0.2 -4,-0.0 -4,-0.0 0, 0.0 0.764 22.4-155.9 61.9 120.7 -10.5 -1.2 -5.2 7 7 A a + 0 0 46 4,-0.1 3,-0.2 14,-0.0 -1,-0.2 -0.611 20.1 177.8-128.2 72.2 -8.0 -0.5 -2.4 8 8 A P > - 0 0 82 0, 0.0 3,-2.0 0, 0.0 2,-0.1 0.318 54.2 -30.8 -56.4-164.7 -9.0 -2.5 0.6 9 9 A D T 3 S+ 0 0 173 1,-0.2 3,-0.1 3,-0.0 0, 0.0 -0.339 133.2 33.3 -57.4 123.8 -7.1 -2.6 3.9 10 10 A G T 3 S+ 0 0 44 -3,-0.2 12,-1.5 1,-0.1 2,-0.8 -0.008 93.8 95.4 119.1 -28.3 -3.4 -2.1 3.2 11 11 A M E < -A 21 0A 87 -3,-2.0 2,-0.5 10,-0.2 10,-0.3 -0.852 59.4-159.3-101.6 107.4 -3.7 0.2 0.2 12 12 A Q E -A 20 0A 141 8,-2.0 8,-3.0 -2,-0.8 2,-0.3 -0.745 10.2-142.4 -89.0 124.5 -3.4 3.9 1.2 13 13 A M E -A 19 0A 135 -2,-0.5 6,-0.2 6,-0.3 2,-0.2 -0.626 12.5-142.9 -86.9 143.2 -4.9 6.3 -1.3 14 14 A L - 0 0 65 4,-2.6 3,-0.5 -2,-0.3 -1,-0.0 -0.599 26.3-108.7-102.0 164.7 -3.2 9.7 -1.9 15 15 A R S S+ 0 0 251 1,-0.2 -1,-0.1 -2,-0.2 -2,-0.0 0.819 120.9 55.7 -59.6 -31.4 -4.7 13.1 -2.6 16 16 A S S S- 0 0 108 2,-0.1 -1,-0.2 1,-0.1 3,-0.1 0.838 121.1-108.2 -70.6 -33.7 -3.5 12.8 -6.2 17 17 A G S S+ 0 0 32 -3,-0.5 -2,-0.1 1,-0.4 -1,-0.1 0.009 76.0 127.6 129.6 -28.4 -5.4 9.5 -6.6 18 18 A Q - 0 0 152 -5,-0.1 -4,-2.6 1,-0.1 2,-0.6 -0.238 55.0-131.7 -60.1 148.0 -2.5 7.0 -6.7 19 19 A a E -A 13 0A 44 -6,-0.2 2,-1.0 -3,-0.1 -6,-0.3 -0.909 12.6-157.8-109.5 112.5 -2.8 4.1 -4.3 20 20 A V E -A 12 0A 73 -8,-3.0 -8,-2.0 -2,-0.6 2,-0.1 -0.765 14.5-153.0 -91.9 101.1 0.3 3.3 -2.2 21 21 A A E -A 11 0A 35 -2,-1.0 2,-2.4 -10,-0.3 -10,-0.2 -0.361 34.6 -92.0 -71.5 151.4 0.1 -0.3 -1.1 22 22 A T S S+ 0 0 124 -12,-1.5 -1,-0.1 1,-0.2 -11,-0.1 -0.393 83.3 124.2 -65.1 79.6 1.9 -1.4 2.1 23 23 A T + 0 0 118 -2,-2.4 -1,-0.2 2,-0.0 -2,-0.1 -0.068 29.0 140.9-130.5 31.9 5.2 -2.4 0.3 24 24 A E - 0 0 167 1,-0.1 -2,-0.0 0, 0.0 0, 0.0 -0.482 61.3-102.5 -77.7 147.2 7.7 -0.2 2.3 25 25 A P - 0 0 105 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 -0.586 41.9-153.2 -73.6 110.2 11.1 -1.7 3.2 26 26 A P - 0 0 100 0, 0.0 2,-0.3 0, 0.0 -3,-0.0 0.006 43.6 -50.2 -72.0-176.6 11.0 -2.7 6.9 27 27 A F - 0 0 178 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.407 65.4-112.2 -60.8 118.8 14.0 -2.9 9.2 28 28 A D - 0 0 155 -2,-0.3 -1,-0.1 -3,-0.1 0, 0.0 -0.356 38.2-132.3 -56.2 108.9 16.7 -4.9 7.5 29 29 A P - 0 0 103 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 0.211 6.2-144.0 -51.5-177.8 16.9 -8.1 9.6 30 30 A D - 0 0 112 1,-0.1 2,-2.2 0, 0.0 -2,-0.1 -0.016 29.5-122.7-144.5 31.0 20.2 -9.6 10.8 31 31 A S 0 0 127 1,-0.3 -1,-0.1 0, 0.0 0, 0.0 -0.370 360.0 360.0 62.4 -81.1 19.6 -13.3 10.7 32 32 A Y 0 0 247 -2,-2.2 -1,-0.3 -3,-0.1 0, 0.0 0.284 360.0 360.0 -97.4 360.0 20.4 -14.0 14.3