==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSLATION 04-DEC-03 1RQ6 . COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S17E; . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER . AUTHOR B.WU,A.YEE,Y.J.HUANG,T.A.RAMELOT,A.SEMESI,J.W.JUNG,A.EDWARD, . 62 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5199.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 64.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 51.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 241 0, 0.0 2,-0.2 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 173.9 -22.5 8.5 -12.0 2 2 A G - 0 0 61 1,-0.1 2,-0.2 2,-0.0 0, 0.0 -0.418 360.0 -44.9-128.6-150.8 -19.0 9.9 -12.2 3 3 A N - 0 0 143 -2,-0.2 -1,-0.1 1,-0.1 0, 0.0 -0.554 39.2-140.3 -85.7 151.3 -15.5 8.7 -12.5 4 4 A I + 0 0 155 -2,-0.2 -1,-0.1 -3,-0.1 -2,-0.0 0.991 30.9 175.0 -72.5 -66.4 -14.2 5.8 -10.5 5 5 A R + 0 0 201 1,-0.1 -2,-0.0 3,-0.0 0, 0.0 0.973 39.0 98.9 58.4 88.6 -10.7 7.0 -9.7 6 6 A T >> + 0 0 79 0, 0.0 4,-1.3 0, 0.0 3,-0.9 0.249 56.2 83.2-164.7 -26.1 -8.9 4.7 -7.3 7 7 A S H 3> S+ 0 0 82 1,-0.3 4,-1.8 2,-0.2 5,-0.1 0.808 86.7 62.5 -60.9 -30.5 -6.6 2.5 -9.5 8 8 A F H 3> S+ 0 0 156 1,-0.2 4,-1.8 2,-0.2 -1,-0.3 0.873 100.8 51.7 -64.4 -36.1 -4.0 5.3 -9.5 9 9 A V H <> S+ 0 0 69 -3,-0.9 4,-2.0 1,-0.2 -1,-0.2 0.879 107.9 52.9 -66.3 -36.6 -3.7 4.9 -5.7 10 10 A K H X S+ 0 0 100 -4,-1.3 4,-2.4 1,-0.2 -2,-0.2 0.841 105.5 54.5 -66.4 -33.9 -3.2 1.2 -6.2 11 11 A R H X S+ 0 0 173 -4,-1.8 4,-2.7 2,-0.2 -2,-0.2 0.901 106.8 50.2 -66.8 -41.6 -0.4 2.0 -8.7 12 12 A I H X S+ 0 0 57 -4,-1.8 4,-2.2 2,-0.2 -2,-0.2 0.896 109.7 51.6 -62.6 -40.3 1.4 4.1 -6.1 13 13 A A H X S+ 0 0 1 -4,-2.0 4,-2.8 2,-0.2 5,-0.3 0.935 110.0 49.1 -60.5 -47.0 1.1 1.2 -3.6 14 14 A K H X S+ 0 0 99 -4,-2.4 4,-3.2 1,-0.2 5,-0.2 0.937 111.1 49.0 -56.6 -50.0 2.6 -1.2 -6.2 15 15 A E H < S+ 0 0 110 -4,-2.7 4,-0.5 1,-0.2 -1,-0.2 0.876 114.0 47.6 -58.3 -39.0 5.5 1.2 -6.8 16 16 A M H < S+ 0 0 1 -4,-2.2 3,-0.3 -5,-0.2 -2,-0.2 0.916 120.8 34.6 -69.8 -45.6 6.1 1.5 -3.1 17 17 A I H >< S+ 0 0 10 -4,-2.8 3,-2.5 1,-0.2 5,-0.3 0.946 111.0 58.8 -75.4 -49.7 5.9 -2.2 -2.3 18 18 A E T 3< S+ 0 0 85 -4,-3.2 -1,-0.2 1,-0.3 -3,-0.1 0.566 90.1 73.3 -65.6 -8.9 7.5 -3.7 -5.5 19 19 A T T 3 S+ 0 0 76 -4,-0.5 -1,-0.3 1,-0.3 -2,-0.1 0.694 108.3 33.3 -76.7 -17.3 10.7 -1.7 -4.8 20 20 A H S < S- 0 0 75 -3,-2.5 2,-0.9 -4,-0.2 -1,-0.3 -0.898 75.0-148.0-142.5 109.1 11.5 -4.1 -2.0 21 21 A P + 0 0 114 0, 0.0 2,-1.8 0, 0.0 -3,-0.1 0.144 63.5 120.3 -67.7 25.8 10.4 -7.8 -2.3 22 22 A G + 0 0 27 -2,-0.9 2,-0.2 -5,-0.3 3,-0.2 -0.398 48.1 142.2 -84.2 60.1 9.9 -8.0 1.4 23 23 A K + 0 0 87 -2,-1.8 31,-0.0 1,-0.2 8,-0.0 -0.614 37.0 32.1-107.9 158.4 6.3 -8.8 0.8 24 24 A F + 0 0 78 -2,-0.2 -1,-0.2 1,-0.1 31,-0.0 0.955 59.6 134.6 65.1 54.9 3.7 -11.2 2.4 25 25 A T - 0 0 65 -3,-0.2 5,-0.1 2,-0.2 -1,-0.1 0.354 56.6-143.6-105.7 0.4 4.8 -11.1 6.0 26 26 A D + 0 0 105 1,-0.1 2,-0.4 28,-0.1 -3,-0.0 0.710 59.0 116.7 43.9 35.6 1.1 -10.6 6.9 27 27 A D > - 0 0 74 1,-0.1 4,-1.8 0, 0.0 5,-0.2 -0.978 66.1-138.0-131.6 144.3 1.9 -8.3 9.8 28 28 A F H > S+ 0 0 149 -2,-0.4 4,-2.1 1,-0.2 5,-0.1 0.857 104.9 54.4 -67.4 -36.2 0.9 -4.6 10.2 29 29 A D H > S+ 0 0 83 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.899 107.2 51.6 -65.7 -39.6 4.4 -3.7 11.6 30 30 A T H > S+ 0 0 38 1,-0.2 4,-2.6 2,-0.2 -2,-0.2 0.950 112.2 43.7 -61.2 -52.1 6.1 -5.2 8.5 31 31 A N H X S+ 0 0 0 -4,-1.8 4,-2.0 2,-0.2 -1,-0.2 0.833 110.7 58.2 -65.1 -32.4 3.9 -3.2 6.1 32 32 A K H X S+ 0 0 75 -4,-2.1 4,-2.2 2,-0.2 -2,-0.2 0.964 111.5 39.1 -58.9 -53.8 4.3 -0.1 8.2 33 33 A K H X S+ 0 0 91 -4,-2.4 4,-2.2 1,-0.2 -2,-0.2 0.861 110.8 60.4 -66.5 -36.3 8.1 -0.2 7.9 34 34 A L H < S+ 0 0 6 -4,-2.6 4,-0.4 -5,-0.2 5,-0.2 0.886 110.2 42.2 -57.8 -40.6 7.8 -1.3 4.2 35 35 A V H >X S+ 0 0 0 -4,-2.0 3,-1.1 1,-0.2 4,-0.8 0.932 114.1 50.4 -69.7 -46.3 6.0 2.0 3.6 36 36 A E H 3< S+ 0 0 88 -4,-2.2 -2,-0.2 1,-0.3 -1,-0.2 0.745 103.0 58.9 -71.0 -25.3 8.3 4.1 5.7 37 37 A E T 3< S+ 0 0 115 -4,-2.2 -1,-0.3 -5,-0.1 -2,-0.2 0.668 126.8 16.1 -78.5 -15.4 11.5 2.9 4.1 38 38 A F T <4 S+ 0 0 75 -3,-1.1 -2,-0.2 -4,-0.4 -3,-0.1 0.633 78.6 169.6-113.8 -80.5 10.3 4.1 0.7 39 39 A S < + 0 0 56 -4,-0.8 -3,-0.1 -5,-0.2 -4,-0.0 0.917 10.8 161.1 63.8 103.5 7.3 6.5 0.9 40 40 A T + 0 0 79 -28,-0.1 2,-0.4 2,-0.1 -1,-0.1 0.121 45.1 105.6-132.2 17.2 6.4 8.3 -2.3 41 41 A V - 0 0 32 3,-0.0 2,-0.2 -29,-0.0 6,-0.1 -0.802 60.3-138.4-107.8 138.6 2.9 9.3 -1.2 42 42 A S S S+ 0 0 97 -2,-0.4 -2,-0.1 4,-0.1 4,-0.1 -0.496 71.1 55.3 -87.8 164.9 1.7 12.8 -0.3 43 43 A T S >> S- 0 0 100 -2,-0.2 3,-1.1 3,-0.1 4,-0.6 0.828 73.3-133.9 72.4 107.5 -0.6 13.6 2.6 44 44 A K T >4 S+ 0 0 183 1,-0.3 3,-0.8 2,-0.2 4,-0.3 0.825 103.2 49.9 -66.1 -35.3 0.8 12.1 5.9 45 45 A H T >> S+ 0 0 133 1,-0.2 3,-0.8 2,-0.2 4,-0.6 0.639 97.7 70.6 -78.8 -12.3 -2.5 10.5 7.1 46 46 A L H <> S+ 0 0 52 -3,-1.1 4,-1.6 1,-0.2 3,-0.4 0.748 82.2 73.0 -74.3 -21.8 -2.9 8.9 3.7 47 47 A R H S+ 0 0 78 -3,-0.8 4,-2.3 -4,-0.3 -1,-0.2 0.915 103.1 47.4 -61.7 -44.2 -2.4 4.9 7.0 49 49 A K H X S+ 0 0 140 -4,-0.6 4,-2.0 -3,-0.4 -1,-0.2 0.849 111.5 52.1 -67.6 -34.3 -4.6 3.8 4.1 50 50 A I H X S+ 0 0 3 -4,-1.6 4,-2.3 2,-0.2 -2,-0.2 0.949 110.3 46.7 -65.4 -49.5 -1.5 2.6 2.2 51 51 A A H X S+ 0 0 17 -4,-2.7 4,-1.9 1,-0.2 -2,-0.2 0.894 115.6 46.0 -60.9 -42.1 -0.3 0.5 5.1 52 52 A G H X S+ 0 0 35 -4,-2.3 4,-2.1 -5,-0.2 -1,-0.2 0.850 108.8 57.2 -67.9 -34.0 -3.8 -1.0 5.6 53 53 A Y H X S+ 0 0 70 -4,-2.0 4,-2.5 2,-0.2 -2,-0.2 0.920 106.9 47.6 -63.2 -45.9 -4.1 -1.5 1.9 54 54 A I H X S+ 0 0 2 -4,-2.3 4,-2.8 1,-0.2 5,-0.2 0.968 111.9 49.0 -58.9 -56.6 -0.9 -3.7 1.8 55 55 A T H X S+ 0 0 15 -4,-1.9 4,-2.5 1,-0.2 -1,-0.2 0.859 111.5 51.8 -49.7 -40.2 -2.0 -5.7 4.7 56 56 A R H X S+ 0 0 167 -4,-2.1 4,-1.8 2,-0.2 -1,-0.2 0.936 109.7 47.3 -65.1 -48.1 -5.4 -6.2 3.0 57 57 A I H X S+ 0 0 74 -4,-2.5 4,-1.2 1,-0.2 -2,-0.2 0.917 114.1 49.0 -59.2 -43.4 -3.9 -7.4 -0.2 58 58 A I H X S+ 0 0 7 -4,-2.8 4,-1.5 1,-0.2 3,-0.4 0.933 109.6 49.4 -62.6 -49.0 -1.6 -9.8 1.7 59 59 A S H < S+ 0 0 66 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.818 115.5 43.9 -65.3 -31.2 -4.4 -11.3 3.8 60 60 A Q H < S+ 0 0 152 -4,-1.8 -1,-0.3 -5,-0.2 -2,-0.2 0.679 106.2 63.3 -85.0 -18.5 -6.6 -11.9 0.8 61 61 A Q H < 0 0 131 -4,-1.2 -2,-0.2 -3,-0.4 -1,-0.2 0.872 360.0 360.0 -73.4 -37.8 -3.7 -13.2 -1.3 62 62 A K < 0 0 201 -4,-1.5 -2,-0.2 -5,-0.1 -3,-0.1 0.993 360.0 360.0 -75.9 360.0 -3.1 -16.2 1.0