==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 07-DEC-03 1RQT . COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L7/L12; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR E.V.BOCHAROV,A.G.SOBOL,K.V.PAVLOV,D.M.KORZHNEV,V.A.JARAVINE, . 74 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5796.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 73.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 14.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 48.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 130 0, 0.0 2,-0.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 71.6 3.5 -2.2 -13.9 2 2 A I + 0 0 140 4,-0.0 2,-0.1 3,-0.0 5,-0.0 -0.495 360.0 157.6-104.5 59.9 2.2 -0.1 -11.1 3 3 A T > - 0 0 74 -2,-0.6 4,-1.1 1,-0.1 5,-0.1 -0.437 55.7-113.5 -82.9 158.7 -1.5 -0.2 -12.2 4 4 A K H >> S+ 0 0 67 1,-0.2 4,-1.3 2,-0.2 3,-0.9 0.903 120.1 51.6 -55.7 -44.1 -4.4 0.4 -9.8 5 5 A D H >> S+ 0 0 112 1,-0.3 4,-1.8 2,-0.2 3,-0.6 0.908 101.0 60.9 -60.1 -44.2 -5.4 -3.2 -10.3 6 6 A Q H 34 S+ 0 0 104 1,-0.3 4,-0.3 2,-0.2 -1,-0.3 0.789 104.5 51.0 -53.4 -29.4 -1.9 -4.3 -9.4 7 7 A I H XX S+ 0 0 42 -4,-1.1 4,-1.5 -3,-0.9 3,-0.7 0.832 101.9 60.1 -77.9 -34.6 -2.4 -2.6 -6.1 8 8 A I H S+ 0 0 40 -3,-0.7 3,-1.3 -4,-0.3 4,-0.8 0.884 103.6 46.6 -76.0 -41.3 -1.6 -6.4 -3.1 11 11 A V H 3< S+ 0 0 18 -4,-1.5 3,-0.3 -3,-0.5 -2,-0.2 0.790 110.7 54.1 -69.3 -28.6 -4.4 -5.8 -0.6 12 12 A A T 3< S+ 0 0 58 -4,-1.5 -1,-0.3 1,-0.2 -2,-0.2 0.255 100.5 64.5 -88.3 11.4 -5.6 -9.3 -1.3 13 13 A A T <4 S+ 0 0 78 -3,-1.3 -1,-0.2 -5,-0.1 -2,-0.2 0.703 99.8 52.9-102.5 -30.1 -2.1 -10.6 -0.6 14 14 A M S < S- 0 0 56 -4,-0.8 2,-0.1 -3,-0.3 5,-0.0 -0.522 94.6 -88.1-103.3 171.8 -2.0 -9.6 3.1 15 15 A S > - 0 0 76 -2,-0.2 4,-1.3 1,-0.1 5,-0.2 -0.315 37.6-109.2 -76.7 162.1 -4.4 -10.4 5.9 16 16 A V H >> S+ 0 0 109 1,-0.2 4,-1.7 2,-0.2 3,-0.6 0.911 120.0 53.5 -56.6 -45.7 -7.3 -8.2 6.8 17 17 A M H 3> S+ 0 0 152 1,-0.3 4,-1.8 2,-0.2 3,-0.3 0.901 105.6 52.1 -56.4 -45.5 -5.6 -7.0 9.9 18 18 A D H 3> S+ 0 0 36 1,-0.3 4,-1.5 2,-0.2 -1,-0.3 0.782 110.6 50.3 -61.7 -27.1 -2.6 -6.0 8.0 19 19 A V H S+ 0 0 67 -4,-2.8 5,-1.2 1,-0.2 -1,-0.2 0.907 115.4 32.2 -49.4 -49.2 -6.9 7.6 7.4 28 28 A E H <5S+ 0 0 170 -4,-1.9 -2,-0.2 -3,-0.3 -1,-0.2 0.931 120.3 51.0 -75.8 -48.8 -4.8 9.6 9.7 29 29 A K H <5S+ 0 0 146 -4,-3.5 -3,-0.2 1,-0.3 -2,-0.2 0.972 123.2 29.0 -52.2 -67.6 -2.2 10.7 7.2 30 30 A F T <5S- 0 0 80 -4,-2.5 -1,-0.3 -5,-0.1 -2,-0.2 0.476 103.7-136.8 -74.4 -1.9 -4.6 12.0 4.6 31 31 A G T 5 + 0 0 55 -5,-0.5 -3,-0.2 1,-0.2 2,-0.2 0.888 59.2 136.0 44.7 51.1 -6.9 12.8 7.5 32 32 A V < + 0 0 110 -5,-1.2 2,-0.5 -6,-0.4 -1,-0.2 -0.579 11.5 134.1-125.4 67.3 -9.9 11.4 5.6 33 33 A S + 0 0 68 -2,-0.2 4,-0.2 -6,-0.2 3,-0.1 -0.651 28.1 113.5-116.3 72.3 -11.7 9.3 8.2 34 34 A A + 0 0 98 -2,-0.5 -1,-0.1 1,-0.1 41,-0.0 -0.508 47.2 85.6-140.8 66.3 -15.3 10.3 7.7 35 35 A A S S- 0 0 59 -2,-0.0 -1,-0.1 0, 0.0 -3,-0.0 -0.379 115.3 -51.0-165.6 74.9 -17.2 7.3 6.4 36 36 A A 0 0 79 39,-0.2 -2,-0.1 -3,-0.1 36,-0.0 0.963 360.0 360.0 52.7 59.7 -18.5 5.0 9.1 37 37 A A 0 0 116 -4,-0.2 -3,-0.1 38,-0.1 -1,-0.0 0.982 360.0 360.0 -60.2 360.0 -15.1 4.7 10.7 38 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 39 1 B S 0 0 128 0, 0.0 2,-0.9 0, 0.0 5,-0.0 0.000 360.0 360.0 360.0 74.7 11.3 -2.5 1.0 40 2 B I + 0 0 154 4,-0.0 2,-0.2 3,-0.0 5,-0.0 -0.467 360.0 153.6 -99.0 59.3 7.6 -3.4 0.6 41 3 B T > - 0 0 67 -2,-0.9 4,-1.1 1,-0.1 5,-0.1 -0.495 57.8-114.3 -87.2 158.5 6.5 -2.1 4.0 42 4 B K H >> S+ 0 0 72 1,-0.2 4,-1.2 2,-0.2 3,-0.9 0.912 119.4 50.8 -55.4 -46.1 3.1 -0.8 4.8 43 5 B D H >> S+ 0 0 132 1,-0.3 4,-1.7 2,-0.2 3,-0.7 0.902 102.8 59.3 -59.2 -43.3 4.5 2.7 5.3 44 6 B Q H 34 S+ 0 0 76 1,-0.3 4,-0.3 2,-0.2 -1,-0.3 0.776 105.6 50.3 -57.0 -27.4 6.2 2.5 1.9 45 7 B I H > S+ 0 0 42 -4,-0.3 3,-0.8 -3,-0.3 4,-0.8 0.847 103.1 46.5 -75.8 -36.1 2.7 5.5 -2.7 49 11 B V H << S+ 0 0 15 -4,-1.5 -1,-0.2 -3,-0.6 -2,-0.2 0.662 112.9 51.2 -78.6 -17.6 -0.9 6.6 -2.2 50 12 B A T 3< S+ 0 0 52 -4,-0.9 -1,-0.2 -5,-0.2 -2,-0.2 0.283 103.4 61.1 -98.9 6.8 0.4 10.1 -1.5 51 13 B A T <4 S+ 0 0 81 -3,-0.8 -2,-0.2 -5,-0.1 -1,-0.1 0.674 95.7 68.9-102.7 -26.7 2.4 10.0 -4.7 52 14 B M S < S- 0 0 57 -4,-0.8 2,-0.1 1,-0.1 5,-0.0 -0.386 93.3 -89.2 -90.2 170.1 -0.5 9.6 -7.1 53 15 B S > - 0 0 78 -2,-0.1 4,-1.7 1,-0.1 5,-0.2 -0.328 33.7-112.6 -77.5 161.2 -3.2 12.1 -8.0 54 16 B V H > S+ 0 0 121 1,-0.2 4,-2.2 2,-0.2 5,-0.1 0.904 119.0 50.7 -59.5 -43.8 -6.4 12.4 -6.1 55 17 B M H > S+ 0 0 150 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.917 107.7 51.7 -60.0 -46.8 -8.3 11.1 -9.1 56 18 B D H > S+ 0 0 39 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.825 112.1 48.4 -59.1 -32.3 -6.0 8.1 -9.4 57 19 B V H X S+ 0 0 30 -4,-1.7 4,-2.9 2,-0.2 5,-0.3 0.830 106.4 56.3 -77.7 -34.3 -6.7 7.4 -5.8 58 20 B V H X S+ 0 0 76 -4,-2.2 4,-2.5 2,-0.2 -2,-0.2 0.929 109.1 46.4 -61.4 -47.2 -10.4 7.8 -6.2 59 21 B E H X S+ 0 0 118 -4,-2.4 4,-2.4 2,-0.2 -2,-0.2 0.910 113.3 50.4 -61.0 -44.8 -10.4 5.1 -8.9 60 22 B L H >X S+ 0 0 9 -4,-1.7 4,-1.9 2,-0.2 3,-0.7 0.984 112.1 44.3 -56.2 -64.8 -8.2 2.9 -6.7 61 23 B I H 3X S+ 0 0 87 -4,-2.9 4,-2.4 1,-0.3 -1,-0.2 0.882 114.6 51.5 -47.3 -45.0 -10.4 3.2 -3.6 62 24 B S H 3X S+ 0 0 66 -4,-2.5 4,-1.6 -5,-0.3 -1,-0.3 0.859 107.1 55.1 -62.4 -37.1 -13.4 2.7 -5.8 63 25 B A H XX S+ 0 0 26 -4,-2.4 4,-3.0 -3,-0.7 3,-1.2 0.991 111.1 40.5 -58.4 -66.8 -11.8 -0.4 -7.3 64 26 B M H 3X>S+ 0 0 29 -4,-1.9 4,-2.4 1,-0.3 5,-0.5 0.855 108.2 65.2 -50.0 -40.0 -11.2 -2.2 -4.0 65 27 B E H 3<>S+ 0 0 65 -4,-2.4 5,-1.0 -5,-0.3 -1,-0.3 0.891 113.6 31.2 -50.3 -45.4 -14.6 -1.0 -2.9 66 28 B E H <<5S+ 0 0 169 -4,-1.6 -2,-0.2 -3,-1.2 -1,-0.2 0.920 120.1 52.1 -80.1 -48.5 -16.2 -3.1 -5.6 67 29 B K H <5S+ 0 0 142 -4,-3.0 -2,-0.2 1,-0.3 -3,-0.2 0.970 123.4 28.3 -51.3 -67.1 -13.7 -5.9 -5.7 68 30 B F T <5S- 0 0 95 -4,-2.4 -1,-0.3 -5,-0.1 -2,-0.2 0.510 102.2-138.7 -74.5 -4.4 -13.7 -6.7 -2.0 69 31 B G T < + 0 0 45 -5,-0.5 2,-0.7 1,-0.2 -3,-0.2 0.894 40.7 163.7 44.6 51.0 -17.3 -5.4 -2.0 70 32 B V < + 0 0 89 -5,-1.0 2,-0.8 -6,-0.4 -1,-0.2 -0.310 20.2 138.0 -92.3 48.8 -16.6 -3.6 1.3 71 33 B S + 0 0 91 -2,-0.7 2,-0.3 -6,-0.2 -6,-0.0 -0.850 17.7 162.7-102.0 103.4 -19.8 -1.5 0.8 72 34 B A S S- 0 0 72 -2,-0.8 -1,-0.1 -36,-0.0 -2,-0.0 -0.549 76.0 -65.7-117.7 63.4 -21.6 -1.1 4.1 73 35 B A S S- 0 0 96 -2,-0.3 -2,-0.0 2,-0.1 -1,-0.0 0.977 120.4 -14.3 51.6 81.0 -23.9 1.8 3.3 74 36 B A 0 0 86 1,-0.2 -3,-0.1 -39,-0.0 -1,-0.1 0.995 360.0 360.0 60.1 69.6 -21.3 4.5 2.9 75 37 B A 0 0 45 -5,-0.1 -1,-0.2 -38,-0.0 -39,-0.2 -0.745 360.0 360.0-145.3 360.0 -18.3 2.7 4.4