==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=14-MAR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 29-NOV-11 2RS6 . COMPND 2 MOLECULE: ATP-DEPENDENT RNA HELICASE A; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR T.NAGATA,Y.MUTO,K.TSUDA,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7348.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 51.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 15.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 25 25.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -3 A G > 0 0 107 0, 0.0 3,-1.9 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 163.2 15.6 -12.5 4.1 2 -2 A S T 3 + 0 0 141 1,-0.3 3,-0.1 0, 0.0 0, 0.0 0.623 360.0 64.3 -67.6 -13.9 14.0 -12.2 7.6 3 -1 A S T 3 S- 0 0 105 1,-0.3 2,-0.3 0, 0.0 -1,-0.3 0.476 97.8-143.9 -83.0 -5.1 13.2 -8.5 7.2 4 0 A G < - 0 0 54 -3,-1.9 -1,-0.3 2,-0.0 2,-0.3 -0.618 31.3 -65.1 79.2-132.0 10.8 -9.2 4.3 5 1 A S - 0 0 83 -2,-0.3 3,-0.0 -3,-0.1 0, 0.0 -0.969 26.2-166.8-156.2 163.3 10.7 -6.7 1.3 6 2 A S > + 0 0 62 -2,-0.3 4,-2.8 2,-0.1 5,-0.2 0.086 44.4 127.6-142.8 19.4 9.7 -3.0 0.6 7 3 A G H > S+ 0 0 41 1,-0.2 4,-1.6 2,-0.2 80,-0.1 0.838 78.2 41.3 -63.5 -39.5 9.6 -2.8 -3.3 8 4 A I H > S+ 0 0 4 78,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.874 115.4 50.8 -78.0 -34.6 6.1 -1.2 -3.7 9 5 A K H > S+ 0 0 61 1,-0.2 4,-2.0 2,-0.2 -2,-0.2 0.943 114.8 44.6 -62.7 -47.0 6.5 1.2 -0.7 10 6 A N H X S+ 0 0 103 -4,-2.8 4,-2.7 2,-0.2 -2,-0.2 0.839 109.9 56.8 -65.0 -33.9 9.9 2.3 -2.3 11 7 A F H X S+ 0 0 43 -4,-1.6 4,-2.4 -5,-0.2 -2,-0.2 0.932 109.7 43.1 -68.3 -45.3 8.2 2.5 -5.8 12 8 A L H X S+ 0 0 0 -4,-2.2 4,-2.5 2,-0.2 -2,-0.2 0.924 116.2 49.2 -63.5 -43.2 5.5 5.0 -4.6 13 9 A Y H X S+ 0 0 130 -4,-2.0 4,-2.3 2,-0.2 -2,-0.2 0.911 113.8 45.1 -63.4 -42.9 8.2 6.9 -2.6 14 10 A A H X S+ 0 0 42 -4,-2.7 4,-1.9 2,-0.2 -2,-0.2 0.887 111.5 52.8 -68.4 -39.2 10.6 7.0 -5.7 15 11 A W H < S+ 0 0 31 -4,-2.4 4,-0.3 2,-0.2 -2,-0.2 0.936 112.2 45.7 -60.8 -46.0 7.7 8.0 -8.0 16 12 A C H ><>S+ 0 0 0 -4,-2.5 5,-2.7 1,-0.2 3,-1.5 0.931 111.4 52.8 -59.0 -46.2 6.8 10.9 -5.7 17 13 A G H ><5S+ 0 0 48 -4,-2.3 3,-0.8 1,-0.3 -2,-0.2 0.782 103.8 55.5 -66.9 -27.3 10.6 11.9 -5.4 18 14 A K T 3<5S+ 0 0 189 -4,-1.9 -1,-0.3 1,-0.2 -2,-0.2 0.549 113.4 43.7 -77.3 -8.5 11.0 12.1 -9.2 19 15 A R T < 5S- 0 0 98 -3,-1.5 -1,-0.2 -4,-0.3 -2,-0.2 0.139 120.6-105.6-119.7 9.5 8.0 14.6 -9.2 20 16 A K T < 5S+ 0 0 211 -3,-0.8 -3,-0.2 1,-0.2 2,-0.2 0.768 84.9 114.4 65.1 31.1 9.2 16.7 -6.1 21 17 A M < - 0 0 41 -5,-2.7 -1,-0.2 -8,-0.1 -2,-0.2 -0.712 54.2-146.2-119.0 173.3 6.5 15.1 -3.8 22 18 A T - 0 0 96 -2,-0.2 23,-0.5 -3,-0.1 2,-0.2 -0.988 22.1-122.9-142.2 132.1 6.4 12.8 -0.7 23 19 A P - 0 0 14 0, 0.0 2,-0.5 0, 0.0 21,-0.2 -0.495 19.2-145.4 -77.0 148.4 3.6 10.1 0.1 24 20 A A E -A 43 0A 48 19,-2.9 19,-2.3 -2,-0.2 2,-0.2 -0.962 12.8-161.5-120.7 115.7 1.7 10.4 3.4 25 21 A Y E -A 42 0A 57 -2,-0.5 2,-0.3 17,-0.2 17,-0.2 -0.632 4.7-167.4 -97.4 153.9 0.6 7.1 5.2 26 22 A E E -A 41 0A 96 15,-2.5 15,-2.8 -2,-0.2 2,-0.3 -0.994 9.2-165.1-147.2 129.4 -2.1 6.7 7.8 27 23 A I E -A 40 0A 66 -2,-0.3 2,-0.3 13,-0.2 13,-0.2 -0.914 11.0-171.3-130.2 147.5 -2.7 3.6 10.1 28 24 A R E -A 39 0A 179 11,-2.4 11,-2.8 -2,-0.3 2,-0.4 -0.993 20.2-133.7-134.1 139.9 -5.4 2.1 12.4 29 25 A A E +A 38 0A 59 -2,-0.3 2,-0.3 9,-0.2 9,-0.2 -0.787 34.5 166.9 -93.2 138.1 -5.2 -1.0 14.7 30 26 A V E +A 37 0A 43 7,-3.1 7,-2.5 -2,-0.4 2,-0.1 -0.900 27.0 32.4-145.5 165.0 -8.2 -3.5 14.6 31 27 A G E S-A 36 0A 61 -2,-0.3 5,-0.2 5,-0.2 -2,-0.0 -0.270 93.0 -0.9 83.5-165.8 -9.3 -7.0 15.7 32 28 A N - 0 0 92 3,-0.6 -2,-0.1 1,-0.1 5,-0.1 -0.271 59.9-128.1 -64.3 142.3 -8.5 -9.2 18.8 33 29 A K S S+ 0 0 190 1,-0.2 3,-0.4 2,-0.1 -1,-0.1 0.868 109.9 35.6 -60.8 -41.4 -6.1 -7.8 21.5 34 30 A N S S+ 0 0 129 1,-0.2 2,-0.5 2,-0.0 -1,-0.2 0.820 126.6 40.2 -81.4 -32.6 -3.8 -11.0 21.5 35 31 A R S S- 0 0 183 2,-0.0 -3,-0.6 0, 0.0 -1,-0.2 -0.683 91.0-174.3-117.2 67.7 -4.1 -11.6 17.7 36 32 A Q E -A 31 0A 71 -2,-0.5 2,-0.3 -3,-0.4 -5,-0.2 -0.289 10.5-166.1 -74.4 152.2 -4.0 -7.9 16.5 37 33 A K E -A 30 0A 118 -7,-2.5 -7,-3.1 -5,-0.1 2,-0.3 -0.905 6.3-145.5-133.2 161.2 -4.5 -6.6 12.9 38 34 A F E -AB 29 55A 40 17,-2.9 17,-2.3 -2,-0.3 2,-0.3 -0.979 3.5-157.7-135.4 142.6 -3.8 -3.3 11.1 39 35 A M E -AB 28 54A 87 -11,-2.8 -11,-2.4 -2,-0.3 2,-0.3 -0.888 15.5-165.4-114.5 148.9 -5.4 -1.2 8.3 40 36 A C E -AB 27 53A 2 13,-2.9 13,-2.6 -2,-0.3 2,-0.3 -0.987 11.4-170.8-139.2 145.0 -3.5 1.4 6.3 41 37 A E E -AB 26 52A 84 -15,-2.8 -15,-2.5 -2,-0.3 2,-0.3 -0.950 9.1-162.2-127.3 149.4 -4.3 4.3 3.9 42 38 A V E +AB 25 51A 0 9,-2.0 9,-2.0 -2,-0.3 2,-0.3 -1.000 9.7 176.4-140.1 139.6 -1.9 6.4 1.7 43 39 A R E -A 24 0A 108 -19,-2.3 -19,-2.9 -2,-0.3 2,-0.3 -0.881 15.0-152.4-136.3 160.1 -2.3 9.8 -0.0 44 40 A V > - 0 0 7 5,-0.4 3,-1.7 3,-0.4 5,-0.1 -0.996 35.8 -98.0-140.7 136.5 -0.2 12.2 -2.1 45 41 A E T 3 S+ 0 0 182 -23,-0.5 3,-0.1 -2,-0.3 -23,-0.0 -0.321 109.7 24.9 -59.2 129.1 -0.6 16.1 -2.4 46 42 A G T 3 S+ 0 0 76 1,-0.2 2,-0.4 -2,-0.1 -1,-0.2 0.386 103.3 96.8 93.0 1.8 -2.6 17.1 -5.5 47 43 A F < - 0 0 43 -3,-1.7 -3,-0.4 2,-0.1 -1,-0.2 -0.987 58.5-157.5-125.2 129.0 -4.5 13.8 -5.7 48 44 A N + 0 0 174 -2,-0.4 2,-0.1 -3,-0.1 -1,-0.1 0.597 66.4 89.8 -83.3 -13.2 -8.1 13.3 -4.3 49 45 A Y - 0 0 71 -5,-0.1 -5,-0.4 20,-0.1 2,-0.4 -0.434 59.0-153.7 -81.7 157.7 -7.8 9.4 -4.0 50 46 A A - 0 0 22 -7,-0.1 2,-0.2 -2,-0.1 -7,-0.2 -0.978 13.5-138.9-131.5 120.5 -6.5 7.3 -1.0 51 47 A G E -B 42 0A 0 -9,-2.0 -9,-2.0 -2,-0.4 2,-0.3 -0.595 24.7-150.1 -76.9 139.8 -5.1 3.8 -1.6 52 48 A M E +B 41 0A 114 -2,-0.2 2,-0.3 -11,-0.2 -11,-0.2 -0.892 22.6 157.6-124.0 141.6 -6.2 1.2 1.0 53 49 A G E -B 40 0A 8 -13,-2.6 -13,-2.9 -2,-0.3 2,-0.3 -0.962 11.6-172.0-151.4 166.9 -4.7 -1.9 2.6 54 50 A N E +B 39 0A 98 -2,-0.3 2,-0.2 -15,-0.3 -15,-0.2 -0.978 15.0 140.7-157.4 159.9 -4.8 -4.3 5.7 55 51 A S E -B 38 0A 26 -17,-2.3 -17,-2.9 -2,-0.3 -2,-0.0 -0.948 64.7 -74.8-172.0-171.0 -2.9 -7.3 7.3 56 52 A T S S+ 0 0 88 -19,-0.3 2,-0.3 -2,-0.2 -17,-0.1 0.508 115.9 35.9 -73.1 -8.8 -1.7 -8.8 10.6 57 53 A N S > S- 0 0 50 -19,-0.2 4,-1.7 1,-0.1 -19,-0.2 -0.981 83.0-116.5-151.4 152.6 1.1 -6.2 10.6 58 54 A K H > S+ 0 0 107 -2,-0.3 4,-2.5 1,-0.2 5,-0.2 0.803 109.0 58.3 -64.6 -31.2 1.7 -2.5 9.6 59 55 A K H > S+ 0 0 82 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.942 110.2 40.5 -68.8 -47.7 4.3 -3.3 6.9 60 56 A D H > S+ 0 0 53 2,-0.2 4,-2.1 1,-0.2 -6,-0.2 0.833 114.5 54.9 -69.7 -30.9 2.0 -5.6 4.8 61 57 A A H X S+ 0 0 0 -4,-1.7 4,-2.3 2,-0.2 -21,-0.2 0.939 110.2 45.4 -67.7 -44.7 -0.8 -3.1 5.4 62 58 A Q H X S+ 0 0 46 -4,-2.5 4,-3.0 2,-0.2 -2,-0.2 0.880 110.9 54.1 -61.1 -41.4 1.3 -0.3 4.0 63 59 A S H X S+ 0 0 8 -4,-2.1 4,-2.4 2,-0.2 -2,-0.2 0.910 110.9 45.2 -64.8 -39.0 2.4 -2.5 1.0 64 60 A N H X S+ 0 0 43 -4,-2.1 4,-2.1 2,-0.2 -2,-0.2 0.914 114.4 48.9 -67.8 -41.4 -1.3 -3.2 0.1 65 61 A A H X S+ 0 0 0 -4,-2.3 4,-1.9 2,-0.2 -23,-0.2 0.929 112.7 47.9 -63.6 -44.7 -2.1 0.6 0.5 66 62 A A H X S+ 0 0 0 -4,-3.0 4,-3.0 2,-0.2 5,-0.3 0.942 110.8 51.0 -60.0 -49.3 0.8 1.6 -1.7 67 63 A R H X S+ 0 0 66 -4,-2.4 4,-2.5 1,-0.2 -2,-0.2 0.885 110.6 49.5 -58.1 -39.5 -0.1 -1.0 -4.3 68 64 A D H X S+ 0 0 30 -4,-2.1 4,-2.0 2,-0.2 -1,-0.2 0.837 113.1 45.6 -73.3 -30.8 -3.7 0.3 -4.4 69 65 A F H X S+ 0 0 0 -4,-1.9 4,-2.1 2,-0.2 -2,-0.2 0.900 114.0 48.5 -75.5 -39.1 -2.6 4.0 -4.8 70 66 A V H X S+ 0 0 0 -4,-3.0 4,-1.0 2,-0.2 -2,-0.2 0.915 109.5 53.7 -65.0 -38.3 -0.0 3.0 -7.5 71 67 A N H >X S+ 0 0 47 -4,-2.5 4,-2.2 -5,-0.3 3,-1.4 0.962 106.0 52.7 -57.2 -48.1 -2.9 1.1 -9.1 72 68 A Y H 3X S+ 0 0 37 -4,-2.0 4,-1.9 1,-0.3 -2,-0.2 0.901 102.7 58.0 -53.1 -40.7 -4.9 4.4 -9.0 73 69 A L H 3<>S+ 0 0 1 -4,-2.1 5,-2.0 1,-0.2 6,-1.7 0.757 109.0 45.5 -63.4 -22.5 -1.9 6.1 -10.8 74 70 A V H X<5S+ 0 0 44 -3,-1.4 3,-1.1 -4,-1.0 -2,-0.2 0.848 107.1 57.6 -81.9 -37.3 -2.5 3.5 -13.6 75 71 A R H 3<5S+ 0 0 141 -4,-2.2 -2,-0.2 1,-0.3 -3,-0.2 0.809 115.5 37.2 -61.4 -29.9 -6.4 4.2 -13.5 76 72 A I T 3<5S- 0 0 70 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.311 114.5-120.1-101.5 3.5 -5.5 7.9 -14.2 77 73 A N T < 5S+ 0 0 131 -3,-1.1 -3,-0.2 2,-0.2 -4,-0.1 0.662 79.8 121.2 66.4 23.2 -2.6 7.0 -16.6 78 74 A E S - 0 0 123 -2,-0.3 3,-1.9 1,-0.1 4,-0.5 -0.809 15.9-136.8 -86.6 132.7 2.3 2.3 -16.5 81 77 A S G > S+ 0 0 71 -2,-0.4 3,-1.7 1,-0.3 -1,-0.1 0.846 100.5 72.1 -55.5 -33.4 1.4 -1.1 -14.9 82 78 A E G 3 S+ 0 0 149 1,-0.3 -1,-0.3 -3,-0.0 -3,-0.0 0.694 99.1 47.6 -56.3 -22.3 4.5 -2.6 -16.7 83 79 A E G < S+ 0 0 135 -3,-1.9 -1,-0.3 2,-0.1 -2,-0.2 0.609 89.7 102.6 -91.4 -16.3 6.8 -0.6 -14.2 84 80 A V < - 0 0 18 -3,-1.7 -76,-0.1 -4,-0.5 2,-0.1 -0.565 66.0-134.4 -83.1 127.5 4.9 -1.6 -11.0 85 81 A P - 0 0 42 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.314 29.6 -91.2 -76.4 159.6 6.4 -4.3 -8.7 86 82 A A - 0 0 89 1,-0.1 -78,-0.2 -2,-0.1 -79,-0.1 -0.479 28.7-129.1 -70.1 138.8 4.5 -7.2 -7.1 87 83 A V - 0 0 34 -2,-0.2 -1,-0.1 2,-0.1 -79,-0.1 0.653 29.4-133.0 -66.7 -19.8 3.0 -6.6 -3.6 88 84 A G S S+ 0 0 66 1,-0.2 2,-0.3 -25,-0.0 -1,-0.1 0.549 70.0 107.0 80.0 9.4 4.6 -9.8 -2.1 89 85 A I - 0 0 47 -29,-0.1 -1,-0.2 -26,-0.0 -2,-0.1 -0.942 44.2-175.3-124.9 140.5 1.3 -10.9 -0.4 90 86 A V - 0 0 131 -2,-0.3 0, 0.0 -3,-0.1 0, 0.0 -0.975 26.5-111.6-136.5 146.6 -1.2 -13.7 -1.3 91 87 A P - 0 0 118 0, 0.0 3,-0.1 0, 0.0 0, 0.0 -0.359 35.2-102.7 -76.3 157.7 -4.6 -14.7 0.2 92 88 A P - 0 0 114 0, 0.0 2,-0.1 0, 0.0 0, 0.0 -0.362 47.4 -87.8 -71.9 158.4 -5.3 -17.9 2.2 93 89 A P - 0 0 114 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.362 28.9-126.4 -69.6 148.2 -7.2 -20.9 0.6 94 90 A S S S+ 0 0 138 -3,-0.1 3,-0.1 -2,-0.1 0, 0.0 0.499 81.8 88.1 -75.8 -5.8 -11.0 -20.9 0.7 95 91 A G S S- 0 0 48 1,-0.2 0, 0.0 2,-0.0 0, 0.0 -0.215 92.4 -60.6 -85.0 177.7 -11.1 -24.5 2.2 96 92 A P + 0 0 137 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 -0.215 42.3 175.2 -58.6 149.8 -11.1 -25.7 5.9 97 93 A S + 0 0 111 -3,-0.1 -2,-0.0 2,-0.0 -3,-0.0 0.113 47.4 106.2-143.6 16.1 -8.0 -24.9 8.0 98 94 A S 0 0 133 1,-0.3 -1,-0.0 0, 0.0 0, 0.0 0.506 360.0 360.0 -84.0 -5.6 -8.9 -26.2 11.6 99 95 A G 0 0 147 0, 0.0 -1,-0.3 0, 0.0 -2,-0.0 -0.287 360.0 360.0 177.3 360.0 -6.6 -29.3 11.4