==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=14-MAR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 29-NOV-11 2RS7 . COMPND 2 MOLECULE: ATP-DEPENDENT RNA HELICASE A; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR T.NAGATA,Y.MUTO,K.TSUDA,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU . 113 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8346.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 49.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 14.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 27.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 156 A G 0 0 136 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 154.6 -17.6 11.5 7.3 2 157 A S - 0 0 130 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.974 360.0-172.7-165.1 165.0 -16.2 14.6 5.4 3 158 A S - 0 0 120 -2,-0.3 2,-0.2 0, 0.0 0, 0.0 -0.982 30.0 -92.9-162.7 161.2 -13.3 15.9 3.3 4 159 A G - 0 0 66 -2,-0.3 3,-0.1 1,-0.1 -2,-0.0 -0.532 26.5-128.2 -84.2 152.7 -11.7 19.1 1.7 5 160 A S S S+ 0 0 140 -2,-0.2 2,-0.3 1,-0.1 -1,-0.1 0.570 88.3 8.6 -78.1 -10.4 -12.4 20.2 -1.9 6 161 A S - 0 0 107 2,-0.0 2,-0.3 0, 0.0 -1,-0.1 -0.975 65.8-135.2-164.7 156.9 -8.7 20.6 -2.8 7 162 A G + 0 0 66 -2,-0.3 2,-0.3 -3,-0.1 0, 0.0 -0.963 22.1 174.1-124.4 143.5 -5.1 19.8 -1.4 8 163 A L - 0 0 163 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.976 13.3-165.6-145.2 153.5 -1.9 22.0 -1.3 9 164 A E + 0 0 97 -2,-0.3 -2,-0.0 1,-0.1 99,-0.0 -0.980 18.6 162.0-144.0 130.6 1.7 21.9 0.1 10 165 A S + 0 0 121 -2,-0.3 2,-0.2 2,-0.1 -1,-0.1 0.083 49.4 112.3-127.5 14.7 4.1 24.8 0.4 11 166 A E - 0 0 122 1,-0.1 2,-0.1 99,-0.0 -2,-0.0 -0.526 67.6-105.7 -95.8 157.3 6.5 23.1 2.9 12 167 A E - 0 0 165 -2,-0.2 2,-0.3 97,-0.0 -1,-0.1 -0.375 27.5-154.0 -77.3 159.5 10.1 21.8 2.7 13 168 A V - 0 0 65 96,-0.1 96,-0.1 -2,-0.1 2,-0.0 -1.000 18.9-113.7-141.7 132.7 11.1 18.1 2.5 14 169 A D - 0 0 96 -2,-0.3 3,-0.5 1,-0.1 4,-0.4 -0.307 15.7-130.3 -67.4 149.6 14.4 16.4 3.6 15 170 A L S > S+ 0 0 166 1,-0.2 3,-1.1 2,-0.2 4,-0.2 0.869 109.3 57.7 -68.9 -34.8 16.8 14.8 1.0 16 171 A N T >> S+ 0 0 93 1,-0.2 4,-1.7 2,-0.2 3,-1.3 0.739 91.0 71.6 -68.3 -19.8 17.0 11.5 3.1 17 172 A A H 3> S+ 0 0 12 -3,-0.5 4,-1.4 1,-0.3 -1,-0.2 0.785 94.1 55.4 -67.9 -22.6 13.1 11.3 2.8 18 173 A G H <4 S+ 0 0 40 -3,-1.1 -1,-0.3 -4,-0.4 87,-0.2 0.558 107.7 49.8 -80.2 -11.8 13.8 10.3 -0.9 19 174 A L H <4 S+ 0 0 139 -3,-1.3 -2,-0.2 -4,-0.2 -1,-0.2 0.751 120.2 32.7 -95.2 -33.7 16.1 7.5 0.3 20 175 A H H < S- 0 0 140 -4,-1.7 -2,-0.2 85,-0.0 -3,-0.2 0.650 112.3-121.1 -95.2 -20.4 13.6 5.9 2.9 21 176 A G < - 0 0 8 -4,-1.4 -3,-0.2 -5,-0.3 84,-0.1 0.648 1.5-122.2 82.2 127.7 10.4 6.8 0.9 22 177 A N + 0 0 32 84,-0.3 2,-0.4 -5,-0.1 5,-0.1 0.256 65.2 134.6 -80.1 10.0 7.4 9.0 2.1 23 178 A W - 0 0 10 -3,-0.1 2,-0.2 4,-0.1 82,-0.0 -0.527 32.9-178.2 -65.4 118.5 4.9 6.0 1.5 24 179 A T > - 0 0 60 -2,-0.4 4,-2.7 1,-0.0 5,-0.3 -0.613 45.1 -89.1-108.3 172.3 2.6 5.8 4.6 25 180 A L H > S+ 0 0 66 -2,-0.2 4,-0.8 1,-0.2 66,-0.2 0.812 128.9 33.0 -50.9 -38.4 -0.2 3.3 5.4 26 181 A E H > S+ 0 0 145 2,-0.2 4,-2.3 3,-0.1 -1,-0.2 0.861 116.5 53.1 -90.4 -40.8 -2.8 5.6 3.6 27 182 A N H > S+ 0 0 46 1,-0.2 4,-2.2 2,-0.2 -2,-0.2 0.824 110.8 50.0 -68.2 -27.6 -0.6 7.0 0.8 28 183 A A H X S+ 0 0 0 -4,-2.7 4,-2.7 2,-0.2 5,-0.2 0.903 106.7 53.5 -72.3 -41.6 0.3 3.4 -0.1 29 184 A K H X S+ 0 0 65 -4,-0.8 4,-1.4 -5,-0.3 -2,-0.2 0.935 114.4 43.3 -59.6 -41.9 -3.4 2.3 -0.2 30 185 A A H X S+ 0 0 42 -4,-2.3 4,-2.4 2,-0.2 -2,-0.2 0.937 113.1 52.0 -62.1 -47.9 -4.0 5.3 -2.6 31 186 A R H X S+ 0 0 82 -4,-2.2 4,-2.6 2,-0.2 -2,-0.2 0.835 106.6 52.6 -66.4 -32.3 -0.8 4.5 -4.6 32 187 A L H X S+ 0 0 0 -4,-2.7 4,-2.0 2,-0.2 -1,-0.2 0.918 111.4 46.7 -68.4 -40.2 -1.7 0.8 -5.1 33 188 A N H X S+ 0 0 79 -4,-1.4 4,-2.0 -5,-0.2 -2,-0.2 0.888 111.7 51.7 -66.6 -37.9 -5.1 1.9 -6.5 34 189 A Q H X S+ 0 0 74 -4,-2.4 4,-2.5 2,-0.2 5,-0.2 0.938 108.4 51.1 -61.9 -46.4 -3.3 4.5 -8.7 35 190 A Y H X S+ 0 0 16 -4,-2.6 4,-2.3 1,-0.2 6,-0.3 0.908 110.6 49.7 -56.5 -41.7 -1.0 1.7 -10.1 36 191 A F H X>S+ 0 0 8 -4,-2.0 5,-1.3 1,-0.2 4,-0.9 0.876 111.9 47.6 -66.4 -37.4 -4.2 -0.4 -10.9 37 192 A Q H <5S+ 0 0 142 -4,-2.0 -2,-0.2 3,-0.2 -1,-0.2 0.880 115.3 45.1 -70.8 -38.7 -5.8 2.6 -12.7 38 193 A K H <5S+ 0 0 177 -4,-2.5 -2,-0.2 1,-0.2 -1,-0.2 0.863 122.1 36.0 -74.1 -36.9 -2.6 3.4 -14.7 39 194 A E H <5S- 0 0 54 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.463 105.2-121.3 -94.2 -6.5 -1.9 -0.3 -15.7 40 195 A K T <5 + 0 0 183 -4,-0.9 2,-0.2 1,-0.2 -3,-0.2 0.806 66.2 142.4 62.4 32.7 -5.6 -1.4 -16.1 41 196 A I < - 0 0 30 -5,-1.3 2,-0.3 -6,-0.3 -1,-0.2 -0.560 39.2-149.6 -93.4 160.3 -4.9 -4.1 -13.3 42 197 A Q + 0 0 175 -2,-0.2 2,-0.3 -3,-0.1 -9,-0.0 -0.999 17.7 170.1-135.9 138.2 -7.4 -5.2 -10.6 43 198 A G - 0 0 28 -2,-0.3 2,-0.3 21,-0.1 21,-0.1 -0.989 10.2-172.1-147.9 138.8 -6.7 -6.5 -7.0 44 199 A E - 0 0 187 -2,-0.3 2,-0.2 17,-0.0 -2,-0.0 -0.989 31.0-110.3-131.1 139.1 -8.8 -7.2 -3.9 45 200 A Y - 0 0 38 -2,-0.3 2,-0.6 17,-0.1 17,-0.2 -0.486 18.8-141.7 -72.3 131.8 -7.6 -8.1 -0.4 46 201 A K E -A 61 0A 120 15,-2.8 15,-2.5 -2,-0.2 2,-0.3 -0.840 26.9-160.6 -86.5 121.9 -8.1 -11.6 1.0 47 202 A Y E -A 60 0A 68 -2,-0.6 2,-0.4 13,-0.2 13,-0.2 -0.812 16.8-169.6-106.9 151.4 -8.9 -11.3 4.7 48 203 A T E -A 59 0A 54 11,-2.8 11,-3.2 -2,-0.3 2,-0.3 -0.970 16.7-142.8-136.8 119.6 -8.8 -13.8 7.7 49 204 A Q E -A 58 0A 88 -2,-0.4 2,-0.3 9,-0.2 9,-0.2 -0.641 22.2-169.2 -79.0 137.1 -10.3 -13.0 11.1 50 205 A V E +A 57 0A 56 7,-3.1 7,-2.5 -2,-0.3 5,-0.0 -0.928 40.6 26.6-132.9 151.7 -8.3 -14.3 14.2 51 206 A G S S- 0 0 51 -2,-0.3 5,-0.2 5,-0.2 2,-0.1 -0.123 97.8 -46.1 85.4 173.3 -9.0 -14.5 17.9 52 207 A P > - 0 0 67 0, 0.0 3,-1.8 0, 0.0 -2,-0.1 -0.410 58.0-109.1 -72.7 155.3 -12.4 -14.9 19.7 53 208 A D T 3 S+ 0 0 116 1,-0.3 3,-0.3 2,-0.1 -3,-0.0 0.734 118.7 55.7 -64.1 -22.6 -15.3 -12.5 18.6 54 209 A H T 3 S+ 0 0 171 1,-0.2 -1,-0.3 0, 0.0 2,-0.1 0.612 126.1 19.8 -79.8 -15.0 -15.1 -10.5 21.9 55 210 A N S < S+ 0 0 122 -3,-1.8 2,-0.2 2,-0.1 -1,-0.2 -0.553 91.6 149.2-157.4 80.1 -11.3 -9.8 21.3 56 211 A R - 0 0 106 -3,-0.3 2,-0.2 -5,-0.2 -5,-0.2 -0.750 26.6-165.9-118.7 163.1 -10.3 -10.3 17.6 57 212 A S E -A 50 0A 44 -7,-2.5 -7,-3.1 -2,-0.2 2,-0.4 -0.827 20.2-124.7-135.3 173.1 -7.9 -9.0 14.9 58 213 A F E -AB 49 79A 34 21,-2.6 21,-2.3 -2,-0.2 2,-0.4 -0.989 6.7-154.7-131.6 131.8 -7.7 -9.4 11.1 59 214 A I E -AB 48 78A 46 -11,-3.2 -11,-2.8 -2,-0.4 2,-0.3 -0.814 17.5-168.9 -93.3 140.5 -5.0 -10.7 8.7 60 215 A A E -AB 47 77A 0 17,-3.1 17,-2.6 -2,-0.4 2,-0.3 -0.994 5.7-179.5-133.3 142.6 -5.1 -9.3 5.1 61 216 A E E +AB 46 76A 44 -15,-2.5 -15,-2.8 -2,-0.3 2,-0.3 -0.973 7.5 174.2-144.7 154.0 -3.1 -10.5 2.1 62 217 A M E - B 0 75A 9 13,-2.1 13,-2.4 -2,-0.3 2,-0.3 -0.976 10.4-164.4-158.6 145.5 -2.7 -9.7 -1.7 63 218 A T E - B 0 74A 76 -2,-0.3 2,-0.3 11,-0.2 11,-0.3 -0.997 13.9-177.9-137.2 132.1 -0.5 -10.9 -4.6 64 219 A I E - B 0 73A 11 9,-2.8 9,-2.7 -2,-0.3 2,-0.4 -0.979 21.5-130.1-135.0 143.8 -0.1 -9.0 -7.9 65 220 A Y E - B 0 72A 128 -2,-0.3 2,-0.7 7,-0.3 7,-0.3 -0.763 13.6-147.9 -95.5 138.2 1.8 -9.6 -11.2 66 221 A I E >>> - B 0 71A 0 5,-3.4 4,-2.4 -2,-0.4 3,-1.8 -0.848 11.5-174.7-113.1 96.0 4.1 -6.8 -12.8 67 222 A K T 345S+ 0 0 117 -2,-0.7 -1,-0.1 1,-0.3 5,-0.1 0.731 84.2 61.8 -66.3 -22.5 4.0 -7.0 -16.6 68 223 A Q T 345S+ 0 0 104 1,-0.1 -1,-0.3 3,-0.1 -2,-0.0 0.565 117.2 29.8 -78.4 -10.7 6.7 -4.3 -16.8 69 224 A L T <45S- 0 0 76 -3,-1.8 -2,-0.2 2,-0.2 -1,-0.1 0.612 102.9-122.6-115.6 -27.6 9.2 -6.5 -14.9 70 225 A G T <5S+ 0 0 51 -4,-2.4 2,-0.2 1,-0.3 -3,-0.2 0.710 81.1 77.0 86.6 24.5 8.0 -10.1 -15.9 71 226 A R E S- 0 0 66 -23,-0.2 4,-2.3 -24,-0.1 -23,-0.2 -0.942 92.1 -93.1-155.1 168.3 -9.5 -4.4 12.1 82 237 A K H > S+ 0 0 101 -2,-0.3 4,-2.7 2,-0.2 5,-0.2 0.842 120.7 55.6 -60.5 -33.9 -9.8 -4.9 8.2 83 238 A K H > S+ 0 0 147 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.979 111.5 42.0 -62.8 -54.7 -8.8 -1.2 7.5 84 239 A L H > S+ 0 0 61 2,-0.2 4,-2.2 1,-0.2 -2,-0.2 0.870 115.7 51.6 -58.6 -41.3 -5.4 -1.4 9.5 85 240 A A H X S+ 0 0 0 -4,-2.3 4,-2.2 2,-0.2 -25,-0.2 0.949 113.3 42.4 -61.6 -50.6 -4.8 -4.9 8.0 86 241 A A H X S+ 0 0 0 -4,-2.7 4,-2.9 2,-0.2 -2,-0.2 0.850 112.6 55.0 -68.6 -34.4 -5.3 -3.7 4.3 87 242 A Q H X S+ 0 0 37 -4,-2.7 4,-2.2 -5,-0.2 -1,-0.2 0.928 110.9 44.7 -58.2 -48.7 -3.3 -0.5 5.0 88 243 A S H X S+ 0 0 29 -4,-2.2 4,-1.4 2,-0.2 -2,-0.2 0.885 114.2 49.9 -68.0 -36.7 -0.4 -2.7 6.2 89 244 A C H X S+ 0 0 0 -4,-2.2 4,-1.7 2,-0.2 3,-0.3 0.952 110.1 50.2 -62.9 -49.0 -0.8 -5.0 3.2 90 245 A A H X S+ 0 0 0 -4,-2.9 4,-3.1 1,-0.2 3,-0.4 0.921 109.4 50.4 -58.0 -47.0 -0.9 -2.0 0.7 91 246 A L H X S+ 0 0 33 -4,-2.2 4,-2.4 1,-0.2 -1,-0.2 0.834 107.7 55.5 -60.8 -31.0 2.3 -0.5 2.2 92 247 A S H < S+ 0 0 33 -4,-1.4 4,-0.5 -3,-0.3 -1,-0.2 0.828 112.7 40.4 -74.7 -30.6 4.0 -4.0 1.8 93 248 A L H >X S+ 0 0 0 -4,-1.7 4,-2.5 -3,-0.4 3,-0.9 0.940 116.4 50.3 -74.2 -48.8 3.1 -4.1 -1.9 94 249 A V H 3X S+ 0 0 0 -4,-3.1 4,-2.2 1,-0.3 -2,-0.2 0.873 108.7 51.0 -62.6 -37.6 4.0 -0.4 -2.4 95 250 A R H 3X S+ 0 0 91 -4,-2.4 4,-1.3 2,-0.2 -1,-0.3 0.727 111.2 49.3 -73.9 -17.1 7.4 -0.8 -0.7 96 251 A Q H <> S+ 0 0 61 -3,-0.9 4,-2.5 -4,-0.5 -2,-0.2 0.862 109.6 51.1 -81.9 -37.1 8.2 -3.8 -3.0 97 252 A L H X>S+ 0 0 0 -4,-2.5 5,-2.7 2,-0.2 6,-1.1 0.905 113.2 46.4 -60.8 -41.8 7.1 -1.6 -6.0 98 253 A Y H <5S+ 0 0 49 -4,-2.2 3,-0.3 3,-0.2 -2,-0.2 0.880 112.8 49.2 -66.8 -39.8 9.6 1.1 -4.7 99 254 A H H <5S+ 0 0 160 -4,-1.3 -2,-0.2 1,-0.2 -1,-0.2 0.883 114.5 44.3 -68.0 -39.1 12.4 -1.6 -4.1 100 255 A L H <5S- 0 0 53 -4,-2.5 -1,-0.2 -5,-0.0 -2,-0.2 0.529 118.2-113.6 -82.3 -9.5 11.9 -3.1 -7.6 101 256 A G T <5S+ 0 0 57 -4,-0.6 -3,-0.2 -3,-0.3 -4,-0.1 0.662 81.3 124.6 84.5 20.5 11.8 0.5 -9.2 102 257 A V S