==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-MAR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 15-JUN-12 2RSU . COMPND 2 MOLECULE: UBIQUITIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.KITAZAWA,T.KAMEDA,M.YAGI-UTSUMI,K.KATO,R.KITAHARA . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5555.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 63.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 6.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 18.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 13.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 123 0, 0.0 16,-1.3 0, 0.0 2,-0.2 0.000 360.0 360.0 360.0 64.6 19.6 26.8 33.3 2 2 A Q E -A 16 0A 106 14,-0.2 62,-1.8 12,-0.0 2,-0.4 -0.606 360.0-156.3 -85.2 145.5 22.8 24.7 33.2 3 3 A I E -A 15 0A 6 12,-2.3 12,-2.0 -2,-0.2 2,-0.3 -0.978 8.3-147.1-117.9 127.8 25.9 25.4 31.0 4 4 A F E -Ab 14 66A 66 61,-1.6 63,-2.7 -2,-0.4 2,-0.4 -0.655 8.8-150.4 -89.3 148.2 28.3 22.6 30.0 5 5 A V E -Ab 13 67A 2 8,-2.0 8,-2.3 -2,-0.3 2,-0.5 -0.983 7.1-166.6-123.3 129.5 32.0 23.4 29.4 6 6 A K E -Ab 12 68A 85 61,-3.0 63,-2.5 -2,-0.4 6,-0.2 -0.975 9.1-156.0-111.7 120.3 34.3 21.4 27.0 7 7 A T E > - b 0 69A 27 4,-1.1 3,-1.8 -2,-0.5 63,-0.2 -0.538 37.3-101.6 -79.9 164.0 38.1 21.9 27.3 8 8 A L T 3 S+ 0 0 136 61,-1.6 62,-0.1 1,-0.3 -1,-0.1 0.761 127.1 56.1 -53.2 -27.6 40.4 21.3 24.3 9 9 A T T 3 S- 0 0 140 2,-0.1 -1,-0.3 0, 0.0 -3,-0.0 0.628 125.0-104.5 -77.6 -19.8 41.3 17.9 26.1 10 10 A G < + 0 0 38 -3,-1.8 2,-0.6 1,-0.2 -2,-0.1 0.441 61.2 161.8 106.6 7.1 37.5 17.0 26.2 11 11 A K - 0 0 90 1,-0.1 -4,-1.1 -5,-0.0 2,-0.5 -0.489 27.7-151.0 -69.8 106.8 36.8 17.7 30.0 12 12 A T E +A 6 0A 81 -2,-0.6 2,-0.2 -6,-0.2 -6,-0.2 -0.731 23.9 170.3 -79.6 117.5 33.0 18.0 30.3 13 13 A I E -A 5 0A 18 -8,-2.3 -8,-2.0 -2,-0.5 2,-0.3 -0.760 20.3-143.6-122.8 174.3 32.1 20.4 33.2 14 14 A T E +A 4 0A 37 -10,-0.3 2,-0.3 -2,-0.2 -10,-0.2 -0.998 16.4 176.6-148.1 133.7 28.7 21.9 34.4 15 15 A L E -A 3 0A 20 -12,-2.0 -12,-2.3 -2,-0.3 2,-0.5 -0.943 27.6-123.7-139.6 158.0 27.9 25.3 35.9 16 16 A E E +A 2 0A 153 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.931 46.5 142.4-109.0 118.6 24.7 27.3 37.1 17 17 A V - 0 0 4 -16,-1.3 -2,-0.0 -2,-0.5 9,-0.0 -0.890 39.9-119.6-145.7 175.0 24.2 30.7 35.4 18 18 A E > - 0 0 99 -2,-0.3 3,-2.3 4,-0.1 38,-0.3 -0.891 26.1-117.3-125.7 150.6 21.4 33.0 34.0 19 19 A P T 3 S+ 0 0 56 0, 0.0 38,-2.3 0, 0.0 39,-0.3 0.669 118.0 53.5 -61.4 -16.5 20.7 34.4 30.5 20 20 A S T 3 S+ 0 0 88 36,-0.2 2,-0.1 35,-0.1 0, 0.0 0.364 85.9 114.1 -95.5 -1.0 21.2 37.9 32.1 21 21 A D S < S- 0 0 18 -3,-2.3 35,-1.4 1,-0.1 2,-0.2 -0.356 70.7-109.4 -72.9 151.7 24.7 37.1 33.6 22 22 A T B > -C 55 0B 64 33,-0.2 4,-2.1 1,-0.1 5,-0.2 -0.545 22.6-119.7 -78.1 146.5 27.9 38.9 32.4 23 23 A I H > S+ 0 0 0 31,-1.3 4,-2.3 28,-0.3 5,-0.2 0.889 114.1 52.9 -52.8 -44.2 30.5 36.9 30.5 24 24 A E H > S+ 0 0 112 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.930 109.0 49.2 -60.6 -46.6 33.2 37.5 33.2 25 25 A N H > S+ 0 0 86 2,-0.2 4,-1.6 1,-0.2 -1,-0.2 0.896 111.1 49.4 -56.3 -45.7 30.9 36.1 36.0 26 26 A V H < S+ 0 0 7 -4,-2.1 4,-0.2 1,-0.2 -1,-0.2 0.905 115.2 44.3 -66.1 -39.2 30.0 33.0 33.9 27 27 A K H >< S+ 0 0 20 -4,-2.3 3,-1.2 -5,-0.2 4,-0.4 0.798 105.9 63.5 -66.5 -33.3 33.8 32.5 33.3 28 28 A A H >X S+ 0 0 29 -4,-2.0 3,-1.9 1,-0.3 4,-0.5 0.891 91.2 63.3 -66.6 -37.3 34.5 33.2 37.0 29 29 A K H 3X S+ 0 0 67 -4,-1.6 4,-0.9 1,-0.3 -1,-0.3 0.628 84.3 77.8 -62.4 -15.9 32.5 30.1 38.1 30 30 A I H <>>S+ 0 0 7 -3,-1.2 4,-2.3 -4,-0.2 5,-0.8 0.860 90.1 55.9 -60.8 -32.2 35.1 28.0 36.3 31 31 A Q H <45S+ 0 0 81 -3,-1.9 -1,-0.2 -4,-0.4 -2,-0.2 0.912 101.8 55.2 -66.0 -41.2 37.4 28.7 39.4 32 32 A D H <5S+ 0 0 153 -4,-0.5 -1,-0.2 1,-0.2 -2,-0.2 0.715 117.9 35.2 -65.7 -24.2 34.7 27.2 41.8 33 33 A K H <5S+ 0 0 121 -4,-0.9 -2,-0.2 -3,-0.4 -1,-0.2 0.732 142.8 2.7 -96.4 -32.9 34.7 23.9 39.7 34 34 A E T <5S- 0 0 91 -4,-2.3 -3,-0.2 -5,-0.2 -2,-0.1 0.676 87.5-117.4-116.4 -69.7 38.4 23.7 38.8 35 35 A G < + 0 0 49 -5,-0.8 -4,-0.2 1,-0.3 -3,-0.1 0.254 68.9 122.3 136.6 -4.8 40.6 26.5 40.2 36 36 A I - 0 0 59 -6,-0.4 -1,-0.3 1,-0.0 -2,-0.1 -0.788 54.5-132.6 -95.7 123.3 41.8 28.3 37.0 37 37 A P >> - 0 0 52 0, 0.0 4,-1.7 0, 0.0 3,-0.9 -0.176 23.3-103.7 -74.6 163.6 41.0 32.1 36.7 38 38 A P T 34 S+ 0 0 31 0, 0.0 -10,-0.1 0, 0.0 5,-0.1 0.362 115.7 61.8 -69.0 2.8 39.5 34.0 33.6 39 39 A D T 34 S+ 0 0 128 3,-0.1 -3,-0.0 33,-0.0 3,-0.0 0.755 108.2 41.1 -92.3 -32.8 43.0 35.5 32.7 40 40 A Q T <4 S+ 0 0 89 -3,-0.9 32,-2.4 31,-0.1 2,-0.3 0.817 120.1 49.6 -81.9 -31.9 44.6 32.1 32.1 41 41 A N E < S-D 71 0C 9 -4,-1.7 30,-0.2 30,-0.2 2,-0.2 -0.824 70.1-162.4-105.6 151.8 41.5 30.8 30.2 42 42 A R E -D 70 0C 129 28,-1.6 28,-0.5 -2,-0.3 2,-0.3 -0.537 15.0-121.5-118.9-178.7 39.5 32.5 27.4 43 43 A L - 0 0 5 7,-0.4 7,-1.9 -2,-0.2 2,-0.3 -0.986 23.0-179.8-134.9 140.5 35.9 32.0 26.0 44 44 A I E +E 49 0D 41 24,-0.5 24,-1.1 -2,-0.3 2,-0.3 -0.997 6.0 176.2-141.5 140.8 34.6 31.1 22.5 45 45 A F E > S-E 48 0D 40 3,-2.4 3,-2.8 -2,-0.3 22,-0.1 -0.982 75.2 -7.8-140.0 138.7 31.2 30.6 20.9 46 46 A A T 3 S- 0 0 99 -2,-0.3 3,-0.1 1,-0.3 -1,-0.0 0.794 129.2 -54.0 45.8 40.2 30.4 29.9 17.2 47 47 A G T 3 S+ 0 0 71 1,-0.2 2,-0.4 0, 0.0 -1,-0.3 0.456 117.1 111.8 75.7 3.7 34.1 30.6 16.2 48 48 A K E < -E 45 0D 145 -3,-2.8 -3,-2.4 0, 0.0 2,-0.4 -0.900 69.8-124.1-111.1 132.6 34.1 34.1 17.9 49 49 A Q E -E 44 0D 134 -2,-0.4 -5,-0.3 -5,-0.2 2,-0.1 -0.625 31.3-134.5 -72.0 125.4 36.0 35.0 21.0 50 50 A L - 0 0 18 -7,-1.9 -7,-0.4 -2,-0.4 2,-0.3 -0.454 20.2-160.5 -83.7 161.3 33.7 36.3 23.8 51 51 A E > - 0 0 139 -2,-0.1 3,-1.2 -9,-0.1 -28,-0.3 -0.969 31.7-107.6-150.2 156.5 34.3 39.4 25.9 52 52 A D T 3 S+ 0 0 74 -2,-0.3 -28,-0.1 1,-0.3 -27,-0.1 0.212 99.8 79.9 -78.7 12.8 33.2 41.0 29.1 53 53 A G T 3 S+ 0 0 57 -31,-0.1 -1,-0.3 2,-0.1 2,-0.2 0.615 91.4 43.3 -95.5 -20.1 31.1 43.8 27.5 54 54 A R S < S- 0 0 133 -3,-1.2 -31,-1.3 1,-0.0 2,-0.2 -0.721 76.7-118.4-119.7 172.6 27.8 41.7 26.6 55 55 A T B > -C 22 0B 35 -2,-0.2 4,-1.2 -33,-0.2 -33,-0.2 -0.532 34.7 -97.6-104.6 174.6 25.6 39.1 28.4 56 56 A L H >>S+ 0 0 8 -35,-1.4 5,-2.4 -38,-0.3 4,-0.5 0.908 123.9 49.5 -60.7 -45.2 24.7 35.5 27.5 57 57 A S H 45S+ 0 0 77 -38,-2.3 3,-0.5 1,-0.2 -1,-0.2 0.821 106.2 57.8 -65.0 -29.1 21.3 36.4 25.8 58 58 A D H 45S+ 0 0 91 -39,-0.3 -1,-0.2 1,-0.2 -2,-0.2 0.786 111.0 42.2 -70.1 -30.4 23.2 39.1 23.8 59 59 A Y H <5S- 0 0 66 -4,-1.2 -1,-0.2 -3,-0.4 -2,-0.2 0.491 114.9-119.2 -87.2 -6.3 25.5 36.3 22.4 60 60 A N T <5 + 0 0 117 -4,-0.5 2,-0.8 -3,-0.5 -3,-0.2 0.887 51.1 167.9 60.1 45.2 22.4 33.9 21.9 61 61 A I < - 0 0 14 -5,-2.4 -1,-0.2 -42,-0.1 2,-0.1 -0.793 14.2-167.4 -89.3 106.3 23.9 31.3 24.4 62 62 A Q > - 0 0 110 -2,-0.8 3,-1.0 1,-0.2 -5,-0.0 -0.405 30.6 -82.3 -81.1 165.4 21.1 28.7 25.2 63 63 A K T 3 S+ 0 0 131 1,-0.2 -60,-0.2 -2,-0.1 -1,-0.2 -0.218 114.6 35.8 -56.0 159.3 21.1 26.0 28.0 64 64 A E T 3 S+ 0 0 147 -62,-1.8 2,-0.2 1,-0.2 -1,-0.2 0.541 86.2 147.1 60.6 11.7 22.9 22.7 27.2 65 65 A S < - 0 0 12 -3,-1.0 -61,-1.6 -63,-0.3 2,-0.7 -0.573 47.1-135.0 -72.2 138.7 25.6 24.7 25.3 66 66 A T E -b 4 0A 68 -2,-0.2 -61,-0.2 -63,-0.1 2,-0.1 -0.858 20.4-151.5 -92.3 109.9 29.2 23.4 25.3 67 67 A L E -b 5 0A 5 -63,-2.7 -61,-3.0 -2,-0.7 2,-0.6 -0.427 14.9-120.6 -72.1 157.4 31.6 26.3 26.0 68 68 A H E -b 6 0A 95 -24,-1.1 2,-0.7 -63,-0.2 -24,-0.5 -0.896 20.1-160.3-108.6 109.4 35.1 26.1 24.6 69 69 A L E +b 7 0A 10 -63,-2.5 -61,-1.6 -2,-0.6 2,-0.4 -0.821 15.6 178.7 -91.5 111.5 38.0 26.3 27.2 70 70 A V E -D 42 0C 23 -2,-0.7 -28,-1.6 -28,-0.5 2,-0.3 -0.910 25.8-124.9-111.4 141.1 41.3 27.4 25.6 71 71 A L E -D 41 0C 104 -2,-0.4 2,-0.4 -30,-0.2 -30,-0.2 -0.631 19.7-150.8 -78.5 137.4 44.6 27.9 27.5 72 72 A R + 0 0 115 -32,-2.4 -33,-0.0 -2,-0.3 0, 0.0 -0.915 68.3 10.4-106.7 141.2 46.4 31.2 27.1 73 73 A L S S- 0 0 138 -2,-0.4 -1,-0.2 1,-0.1 2,-0.2 0.986 80.0-125.9 56.3 92.9 50.2 31.4 27.3 74 74 A R + 0 0 223 -3,-0.1 2,-0.3 2,-0.0 -1,-0.1 -0.453 44.8 154.7 -63.2 132.2 51.9 27.9 27.3 75 75 A G 0 0 79 -2,-0.2 0, 0.0 1,-0.1 0, 0.0 -0.975 360.0 360.0-160.6 163.6 54.2 27.4 30.3 76 76 A G 0 0 154 -2,-0.3 -1,-0.1 0, 0.0 -2,-0.0 0.264 360.0 360.0-176.7 360.0 55.9 24.8 32.7