==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-MAY-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 26-JUL-12 2RSW . COMPND 2 MOLECULE: PEPTIDE FROM E1 ENVELOPE GLYCOPROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR H.MOHANRAM,S.BHATTACHARJYA . 18 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1812.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 181 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -17.4 2.1 -0.0 -1.2 2 2 A Y > + 0 0 101 1,-0.1 4,-0.8 2,-0.1 5,-0.1 -0.522 360.0 154.3-120.6 63.6 -0.9 1.2 -3.2 3 3 A P H > + 0 0 67 0, 0.0 4,-0.8 0, 0.0 5,-0.2 0.423 55.7 88.6 -69.8 3.3 -1.5 4.8 -1.8 4 4 A F H >> S+ 0 0 50 2,-0.2 4,-3.2 3,-0.1 3,-0.5 0.828 101.4 7.6 -67.0-111.2 -3.1 5.6 -5.1 5 5 A M H 34 S+ 0 0 128 3,-0.3 -1,-0.1 1,-0.2 4,-0.1 0.816 122.2 75.8 -41.2 -36.4 -6.8 4.9 -5.4 6 6 A W H 3< S+ 0 0 218 -4,-0.8 -1,-0.2 1,-0.2 -2,-0.2 0.930 122.4 0.8 -40.8 -74.2 -6.6 4.1 -1.7 7 7 A G H << S- 0 0 74 -4,-0.8 -1,-0.2 -3,-0.5 -2,-0.2 0.474 143.7 -42.4 -97.4 -4.1 -6.4 7.7 -0.5 8 8 A G < - 0 0 35 -4,-3.2 -3,-0.3 -5,-0.2 -2,-0.1 0.257 60.7-115.8 138.1 93.0 -6.6 9.2 -4.0 9 9 A A + 0 0 20 1,-0.1 -5,-0.1 -4,-0.1 -7,-0.0 -0.191 36.7 167.4 -49.2 130.4 -4.9 7.9 -7.1 10 10 A Y + 0 0 127 4,-0.1 -1,-0.1 3,-0.0 -6,-0.0 0.103 66.0 38.6-134.2 19.0 -2.4 10.6 -8.4 11 11 A C S >>>S+ 0 0 53 3,-0.2 3,-1.7 4,-0.1 5,-1.2 0.320 118.5 24.3-129.5 -98.5 -0.4 8.5 -10.9 12 12 A F T 345S+ 0 0 99 1,-0.3 -3,-0.0 3,-0.2 -8,-0.0 0.699 136.8 40.6 -50.0 -18.0 -1.9 5.9 -13.2 13 13 A C T 345S+ 0 0 50 3,-0.1 -1,-0.3 5,-0.0 -4,-0.1 0.574 138.2 12.8-105.4 -16.4 -5.1 7.8 -12.7 14 14 A D T <45S+ 0 0 77 -3,-1.7 -3,-0.2 4,-0.1 -2,-0.2 0.652 113.8 67.9-123.7 -53.1 -3.5 11.3 -12.9 15 15 A A T <5S+ 0 0 83 -4,-0.8 3,-0.2 1,-0.3 -3,-0.2 0.844 128.4 14.4 -39.1 -43.7 0.0 11.0 -14.2 16 16 A E S