==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PLANT PROTEIN 23-JAN-04 1S6D . COMPND 2 MOLECULE: ALBUMIN 8; . SOURCE 2 ORGANISM_SCIENTIFIC: HELIANTHUS ANNUUS; . AUTHOR D.PANTOJA-UCEDA,M.BRUIX,P.R.SHEWRY,J.SANTORO,M.RICO . 103 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7926.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 55.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 20 19.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 29.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 2 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A P 0 0 118 0, 0.0 2,-0.2 0, 0.0 91,-0.0 0.000 360.0 360.0 360.0 -30.5 -0.4 -7.5 13.1 2 2 A Y - 0 0 133 97,-0.1 2,-0.2 98,-0.0 86,-0.0 -0.766 360.0-132.4-143.7-171.3 2.2 -8.5 10.5 3 3 A G - 0 0 23 -2,-0.2 2,-0.5 99,-0.1 99,-0.2 -0.755 21.3-106.1-139.1-172.5 4.8 -11.1 9.5 4 4 A R + 0 0 189 98,-0.3 2,-0.2 -2,-0.2 98,-0.1 -0.947 48.5 138.2-128.0 114.2 8.3 -11.5 8.3 5 5 A G - 0 0 45 -2,-0.5 2,-0.2 96,-0.1 -2,-0.1 -0.758 23.1-173.9-159.0 99.0 9.0 -12.5 4.7 6 6 A R + 0 0 234 -2,-0.2 2,-0.3 0, 0.0 -2,-0.0 -0.655 14.8 151.8 -92.0 159.5 11.7 -10.9 2.6 7 7 A T - 0 0 109 -2,-0.2 3,-0.1 58,-0.1 -2,-0.0 -0.947 44.1 -80.9-177.3 158.3 12.3 -11.6 -1.1 8 8 A E S S- 0 0 169 -2,-0.3 2,-0.0 1,-0.2 0, 0.0 0.002 73.5 -57.9 -60.8 172.2 13.7 -10.1 -4.3 9 9 A S S S+ 0 0 93 1,-0.1 -1,-0.2 2,-0.1 2,-0.1 -0.306 89.5 107.5 -56.4 131.2 11.6 -7.7 -6.5 10 10 A G S >> S+ 0 0 27 -3,-0.1 4,-1.7 56,-0.0 3,-0.9 -0.193 71.5 33.9-164.2 -98.1 8.4 -9.4 -7.6 11 11 A a H 3> S+ 0 0 19 1,-0.3 4,-1.3 2,-0.2 3,-0.5 0.871 117.2 59.0 -46.0 -47.9 4.9 -8.6 -6.3 12 12 A Y H >> S+ 0 0 57 1,-0.3 4,-1.9 2,-0.2 3,-0.9 0.879 104.4 48.9 -43.0 -52.9 6.0 -5.0 -6.0 13 13 A Q H <> S+ 0 0 114 -3,-0.9 4,-1.0 1,-0.3 -1,-0.3 0.851 113.7 46.6 -59.3 -38.8 6.8 -4.9 -9.7 14 14 A Q H 3X S+ 0 0 102 -4,-1.7 4,-0.6 -3,-0.5 -1,-0.3 0.638 107.3 62.3 -74.3 -14.7 3.4 -6.4 -10.3 15 15 A M H X< S+ 0 0 6 -4,-1.3 3,-1.0 -3,-0.9 -2,-0.2 0.953 98.5 49.6 -76.6 -57.9 1.9 -3.9 -7.9 16 16 A E H >< S+ 0 0 80 -4,-1.9 3,-1.1 1,-0.3 -2,-0.2 0.884 111.6 51.8 -49.9 -38.5 2.8 -0.7 -9.8 17 17 A E H 3< S+ 0 0 181 -4,-1.0 -1,-0.3 1,-0.3 -2,-0.2 0.795 126.0 26.3 -68.5 -27.2 1.3 -2.3 -12.9 18 18 A A T << S- 0 0 24 -3,-1.0 -1,-0.3 -4,-0.6 -2,-0.2 -0.365 86.5-158.4-129.8 52.2 -1.8 -3.0 -10.8 19 19 A E < + 0 0 80 -3,-1.1 3,-0.5 1,-0.2 4,-0.3 -0.032 26.4 162.4 -39.9 92.5 -1.6 -0.2 -8.2 20 20 A M S > S+ 0 0 0 1,-0.2 4,-0.6 -5,-0.2 2,-0.6 0.908 71.7 40.4 -89.8 -44.4 -3.9 -2.0 -5.7 21 21 A L T 4 S+ 0 0 6 1,-0.2 -1,-0.2 2,-0.1 -2,-0.1 -0.332 95.6 87.1-103.6 51.9 -2.9 -0.1 -2.6 22 22 A N T > S+ 0 0 37 -2,-0.6 4,-1.0 -3,-0.5 -1,-0.2 0.689 90.5 38.7-114.3 -37.6 -2.9 3.2 -4.4 23 23 A H H >> S+ 0 0 44 -3,-0.5 4,-1.3 -4,-0.3 3,-0.5 0.933 114.0 53.1 -83.1 -44.8 -6.5 4.3 -4.2 24 24 A b H 3X S+ 0 0 0 -4,-0.6 4,-0.6 1,-0.2 -1,-0.2 0.695 105.6 61.0 -61.2 -17.4 -7.0 3.1 -0.6 25 25 A G H >> S+ 0 0 1 2,-0.2 4,-2.6 1,-0.1 3,-0.8 0.901 95.0 57.6 -74.7 -42.2 -3.9 5.2 0.0 26 26 A M H << S+ 0 0 83 -4,-1.0 4,-0.4 -3,-0.5 -2,-0.2 0.887 102.2 56.0 -57.0 -41.5 -5.6 8.5 -1.0 27 27 A Y H 3< S+ 0 0 128 -4,-1.3 -1,-0.3 1,-0.2 3,-0.2 0.823 116.3 36.6 -58.0 -33.3 -8.3 7.9 1.6 28 28 A L H X< S+ 0 0 19 -3,-0.8 3,-0.6 -4,-0.6 -2,-0.2 0.771 118.8 50.5 -91.1 -26.0 -5.5 7.7 4.2 29 29 A M T 3X S+ 0 0 46 -4,-2.6 4,-0.5 1,-0.2 -2,-0.2 0.261 89.1 83.4 -92.7 8.7 -3.4 10.3 2.5 30 30 A K T 34 S+ 0 0 34 -4,-0.4 -1,-0.2 -5,-0.2 -2,-0.1 0.653 102.2 32.4 -88.0 -18.5 -6.4 12.7 2.3 31 31 A N T <4 S+ 0 0 129 -3,-0.6 3,-0.2 -5,-0.1 -1,-0.2 0.428 107.3 71.1-110.1 -7.7 -5.7 13.8 5.9 32 32 A L T 4 S- 0 0 44 1,-0.2 -2,-0.2 -4,-0.2 -3,-0.1 0.694 125.7 -3.0 -79.2 -19.2 -1.9 13.4 5.6 33 33 A G S < S+ 0 0 62 -4,-0.5 2,-0.3 46,-0.0 -1,-0.2 -0.333 96.7 115.2-173.1 76.6 -1.8 16.4 3.3 34 34 A E S S- 0 0 98 -3,-0.2 2,-1.4 0, 0.0 3,-0.1 -0.971 70.5-104.3-153.5 133.2 -5.1 18.1 2.4 35 35 A R - 0 0 187 -2,-0.3 -4,-0.0 1,-0.2 -5,-0.0 -0.438 32.3-167.9 -56.7 93.9 -6.6 21.5 3.1 36 36 A S + 0 0 96 -2,-1.4 -1,-0.2 -5,-0.1 -5,-0.0 0.831 53.2 115.6 -56.7 -34.3 -9.0 20.4 5.8 37 37 A Q + 0 0 140 -3,-0.1 2,-0.4 1,-0.1 -2,-0.0 -0.048 44.1 175.0 -37.4 119.8 -10.5 23.9 5.4 38 38 A V - 0 0 80 1,-0.1 -1,-0.1 2,-0.1 -2,-0.1 -0.984 25.5-174.4-142.3 117.5 -14.0 23.3 4.0 39 39 A S S S+ 0 0 123 -2,-0.4 -1,-0.1 3,-0.1 -2,-0.0 0.932 76.8 44.2 -71.7 -56.1 -16.7 26.0 3.5 40 40 A P S S- 0 0 79 0, 0.0 3,-0.1 0, 0.0 -2,-0.1 0.163 113.6 -69.4 -73.9-164.7 -19.5 23.7 2.5 41 41 A R S S- 0 0 224 1,-0.2 2,-0.2 0, 0.0 -3,-0.1 0.984 86.6 -70.5 -50.0 -84.4 -20.5 20.4 4.2 42 42 A M - 0 0 134 2,-0.0 -1,-0.2 -3,-0.0 2,-0.1 -0.749 39.2-151.7-156.0-161.4 -17.6 18.2 3.3 43 43 A R + 0 0 206 -2,-0.2 2,-0.2 -3,-0.1 0, 0.0 -0.484 29.5 129.3 166.5 128.2 -16.0 16.3 0.3 44 44 A E - 0 0 104 -2,-0.1 -17,-0.0 2,-0.0 -1,-0.0 -0.697 39.4-132.5 169.2 114.8 -13.9 13.2 -0.0 45 45 A E - 0 0 104 -2,-0.2 2,-0.3 2,-0.0 -2,-0.1 -0.012 16.5-138.0 -62.9-175.4 -14.2 10.1 -2.3 46 46 A D + 0 0 106 -20,-0.0 2,-0.5 -19,-0.0 3,-0.2 -0.854 21.2 175.1-155.0 104.8 -13.9 6.5 -1.0 47 47 A H + 0 0 54 -2,-0.3 4,-0.3 -24,-0.3 -20,-0.1 -0.646 34.1 128.4-114.1 78.6 -12.0 3.8 -2.9 48 48 A K S > S+ 0 0 106 -2,-0.5 4,-1.1 2,-0.1 -1,-0.2 0.540 77.4 48.4-104.1 -9.3 -12.2 0.8 -0.6 49 49 A Q H > S+ 0 0 170 -3,-0.2 4,-0.6 2,-0.2 -2,-0.1 0.674 104.4 58.3-102.1 -21.2 -13.4 -1.5 -3.4 50 50 A L H > S+ 0 0 72 2,-0.2 4,-1.5 3,-0.2 5,-0.2 0.796 112.9 40.9 -77.6 -28.9 -10.8 -0.4 -6.0 51 51 A b H > S+ 0 0 4 -4,-0.3 4,-2.6 2,-0.2 5,-0.2 0.969 114.1 49.3 -80.2 -52.7 -8.0 -1.5 -3.5 52 52 A c H < S+ 0 0 43 -4,-1.1 4,-0.5 1,-0.2 -2,-0.2 0.681 113.0 57.3 -58.0 -17.7 -9.8 -4.7 -2.4 53 53 A M H >X S+ 0 0 83 -4,-0.6 3,-2.4 2,-0.2 4,-1.1 0.985 110.5 32.4 -74.1 -80.0 -10.2 -5.3 -6.1 54 54 A Q H 3X S+ 0 0 52 -4,-1.5 4,-1.3 1,-0.3 -2,-0.2 0.834 109.3 70.8 -53.5 -32.7 -6.7 -5.2 -7.6 55 55 A L H 3< S+ 0 0 3 -4,-2.6 -1,-0.3 1,-0.3 3,-0.3 0.839 101.1 46.2 -50.9 -35.0 -5.5 -6.7 -4.4 56 56 A K H <4 S+ 0 0 158 -3,-2.4 -1,-0.3 -4,-0.5 -2,-0.2 0.843 100.5 65.1 -73.0 -42.3 -7.3 -9.9 -5.5 57 57 A N H < S+ 0 0 123 -4,-1.1 -2,-0.2 -3,-0.1 -1,-0.2 0.749 97.9 74.8 -48.6 -28.6 -5.8 -9.5 -9.0 58 58 A L S < S- 0 0 22 -4,-1.3 2,-0.2 -3,-0.3 5,-0.1 -0.337 99.4 -91.9 -80.0 167.5 -2.5 -10.2 -7.2 59 59 A D > - 0 0 95 1,-0.1 3,-2.5 -2,-0.1 4,-0.2 -0.541 29.4-117.9 -77.8 153.3 -1.4 -13.5 -5.8 60 60 A E G > S+ 0 0 121 1,-0.3 3,-0.7 2,-0.2 -1,-0.1 0.774 120.7 56.8 -61.1 -21.9 -2.3 -14.5 -2.2 61 61 A K G 3 S+ 0 0 147 1,-0.2 -1,-0.3 3,-0.1 5,-0.1 0.562 101.9 55.3 -83.1 -12.3 1.5 -14.6 -1.7 62 62 A a G < S+ 0 0 2 -3,-2.5 2,-0.6 3,-0.1 5,-0.4 0.210 86.5 88.0 -97.8 10.5 1.6 -11.0 -2.9 63 63 A M S < S+ 0 0 10 -3,-0.7 -1,-0.1 33,-0.2 -3,-0.1 -0.436 103.6 13.6-108.0 58.6 -0.9 -10.0 -0.2 64 64 A d S > S+ 0 0 17 -2,-0.6 4,-1.1 36,-0.1 -2,-0.1 -0.112 128.0 46.3 171.8 -58.2 1.5 -9.3 2.6 65 65 A P H > S+ 0 0 29 0, 0.0 4,-1.1 0, 0.0 -3,-0.1 0.832 114.0 50.2 -77.2 -34.0 5.1 -9.1 1.2 66 66 A A H >> S+ 0 0 1 2,-0.2 4,-2.0 1,-0.2 3,-0.8 0.966 99.8 63.7 -67.6 -52.7 4.0 -6.8 -1.6 67 67 A I H 3> S+ 0 0 6 -5,-0.4 4,-1.3 1,-0.3 3,-0.5 0.866 99.0 56.3 -38.7 -52.4 2.1 -4.4 0.7 68 68 A M H >< S+ 0 0 113 -4,-1.1 3,-1.0 1,-0.3 -1,-0.3 0.906 110.6 43.1 -43.9 -55.4 5.5 -3.6 2.3 69 69 A M H X< S+ 0 0 59 -4,-1.1 3,-2.1 -3,-0.8 4,-0.3 0.756 102.7 68.6 -62.1 -30.6 6.8 -2.6 -1.1 70 70 A M H >< S+ 0 0 9 -4,-2.0 3,-0.8 -3,-0.5 -1,-0.3 0.852 99.4 49.5 -54.8 -38.3 3.6 -0.8 -1.8 71 71 A L T << S+ 0 0 7 -4,-1.3 -1,-0.3 -3,-1.0 -2,-0.2 0.050 106.1 60.3 -90.1 18.4 4.6 1.7 0.8 72 72 A N T < S+ 0 0 76 -3,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.305 81.7 108.9-119.9 -2.7 8.0 2.0 -0.9 73 73 A E S X S- 0 0 37 -3,-0.8 2,-1.7 -4,-0.3 3,-1.5 -0.092 94.3 -82.2 -67.7 175.9 6.7 3.2 -4.2 74 74 A P T 3 S+ 0 0 104 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.053 129.9 44.9 -72.9 41.1 7.2 6.7 -5.6 75 75 A M T 3 S+ 0 0 102 -2,-1.7 2,-0.2 -5,-0.1 -2,-0.1 0.180 99.7 67.2-169.5 26.1 4.3 7.8 -3.5 76 76 A W < + 0 0 4 -3,-1.5 -1,-0.1 -5,-0.1 -51,-0.0 -0.677 57.8 106.5-158.5 89.5 4.7 6.2 -0.1 77 77 A I S S- 0 0 99 -2,-0.2 4,-0.1 -3,-0.1 -6,-0.0 0.462 94.9 -8.7-130.1 -79.8 7.6 7.5 2.1 78 78 A R S > S+ 0 0 201 2,-0.2 3,-1.7 1,-0.1 4,-0.4 0.829 134.1 54.7 -95.9 -41.6 6.8 9.7 5.1 79 79 A M T >> S+ 0 0 55 1,-0.3 4,-1.0 2,-0.2 3,-0.7 0.758 102.3 62.3 -63.6 -22.2 3.2 10.3 4.4 80 80 A R H 3> S+ 0 0 65 1,-0.2 4,-2.1 2,-0.2 -1,-0.3 0.728 75.6 87.8 -73.8 -23.7 2.9 6.5 4.3 81 81 A D H <> S+ 0 0 101 -3,-1.7 4,-0.6 1,-0.2 -1,-0.2 0.844 101.5 36.0 -45.8 -30.4 4.0 6.3 8.0 82 82 A Q H <> S+ 0 0 107 -3,-0.7 4,-2.0 -4,-0.4 3,-0.4 0.906 113.8 53.1 -86.9 -46.3 0.2 6.7 8.6 83 83 A V H X S+ 0 0 1 -4,-1.0 4,-2.2 1,-0.2 -2,-0.2 0.635 99.0 73.7 -61.4 -11.1 -1.1 4.7 5.6 84 84 A M H < S+ 0 0 61 -4,-2.1 -1,-0.2 2,-0.2 -2,-0.2 0.982 106.0 28.4 -68.1 -59.8 1.2 2.0 7.0 85 85 A S H >X S+ 0 0 66 -4,-0.6 3,-1.7 -3,-0.4 4,-0.6 0.880 121.9 54.9 -70.0 -37.0 -1.0 1.1 10.0 86 86 A M H >X S+ 0 0 96 -4,-2.0 4,-1.2 1,-0.3 3,-0.9 0.927 111.3 43.8 -64.5 -42.1 -4.1 2.2 8.1 87 87 A A H 3< S+ 0 0 0 -4,-2.2 -1,-0.3 1,-0.2 -2,-0.2 0.037 100.6 76.2 -88.9 25.0 -3.3 -0.2 5.3 88 88 A H H <4 S+ 0 0 44 -3,-1.7 -1,-0.2 2,-0.1 -2,-0.2 0.632 107.7 25.6-106.1 -22.9 -2.4 -2.8 7.8 89 89 A N H S+ 0 0 0 0, 0.0 5,-3.1 0, 0.0 6,-1.0 0.691 116.8 53.5 -73.7 -19.2 -5.8 -5.5 3.5 92 92 A I H >45S+ 0 0 35 5,-0.3 3,-1.9 4,-0.2 6,-0.3 0.921 102.6 53.8 -79.7 -44.8 -6.4 -7.8 6.5 93 93 A E H 3<5S+ 0 0 169 -4,-2.9 -1,-0.2 1,-0.3 -3,-0.1 0.680 110.3 50.6 -63.5 -17.8 -10.2 -7.2 6.7 94 94 A c T 3<5S- 0 0 44 -4,-0.7 -1,-0.3 -5,-0.2 -2,-0.2 0.553 119.1-116.2 -90.0 -12.4 -10.1 -8.1 3.0 95 95 A N T < 5S+ 0 0 107 -3,-1.9 -3,-0.2 -4,-0.2 -2,-0.1 0.727 83.3 120.0 82.8 25.1 -8.1 -11.3 3.8 96 96 A L S