==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIPID BINDING PROTEIN 07-FEB-04 1SA8 . COMPND 2 MOLECULE: FATTY ACID-BINDING PROTEIN, INTESTINAL; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR B.OGBAY,G.T.DEKOSTER,D.P.CISTOLA . 106 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6623.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 93 87.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 53 50.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 31 29.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 1 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 122 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 133.4 9.2 -12.4 6.1 2 2 A F + 0 0 24 1,-0.1 2,-1.8 12,-0.0 13,-0.6 0.692 360.0 106.0 -74.9 -22.7 7.2 -9.2 5.7 3 3 A D B +a 15 0A 96 11,-0.1 2,-0.3 14,-0.1 13,-0.2 -0.417 67.2 88.2 -60.3 81.2 6.0 -9.1 9.4 4 4 A G E S-B 15 0A 16 -2,-1.8 11,-2.3 11,-1.0 2,-0.5 -0.971 84.5 -85.3-167.5 170.2 8.4 -6.3 10.2 5 5 A T E +B 14 0A 39 -2,-0.3 101,-2.5 9,-0.2 2,-0.5 -0.843 35.9 178.3 -99.8 126.1 8.8 -2.5 10.2 6 6 A W B +E 105 0B 13 7,-0.8 2,-0.3 -2,-0.5 99,-0.3 -0.902 34.6 103.3-127.5 100.4 9.9 -0.9 6.9 7 7 A K - 0 0 1 97,-0.9 2,-0.3 -2,-0.5 96,-0.1 -0.987 64.1 -98.0-168.0 168.7 10.1 2.9 7.1 8 8 A V > - 0 0 63 -2,-0.3 3,-2.2 1,-0.1 98,-0.1 -0.739 58.9 -81.2-100.2 143.0 12.2 6.0 7.4 9 9 A G T 3 S+ 0 0 69 -2,-0.3 -1,-0.1 1,-0.3 3,-0.1 -0.144 118.3 32.9 -49.3 134.7 12.8 7.7 10.8 10 10 A G T 3 S+ 0 0 85 1,-0.4 -1,-0.3 -3,-0.1 2,-0.2 -0.191 116.5 63.3 106.5 -35.6 9.9 9.9 11.9 11 11 A L S < S- 0 0 40 -3,-2.2 -1,-0.4 17,-0.1 2,-0.3 -0.672 71.0-149.3-110.2 168.9 7.4 7.7 10.1 12 12 A K E + C 0 27A 104 15,-1.1 15,-2.4 -2,-0.2 2,-0.3 -0.980 14.1 176.2-142.7 147.9 6.5 4.1 10.9 13 13 A L E - C 0 26A 2 -2,-0.3 -7,-0.8 13,-0.2 2,-0.3 -0.975 3.8-178.8-152.8 137.6 5.3 1.2 8.8 14 14 A T E - C 0 25A 29 11,-1.1 11,-2.3 -2,-0.3 2,-0.3 -0.952 9.1-162.8-148.6 126.7 4.6 -2.4 9.7 15 15 A I E +aC 3 24A 4 -11,-2.3 -11,-1.0 -13,-0.6 2,-0.3 -0.809 15.1 171.8-108.5 148.2 3.5 -5.4 7.7 16 16 A T E - C 0 23A 69 7,-1.4 7,-2.3 -2,-0.3 2,-0.4 -0.980 11.9-162.2-155.7 146.9 2.1 -8.6 9.3 17 17 A Q E - C 0 22A 43 -2,-0.3 2,-1.1 5,-0.2 5,-0.2 -0.941 16.1-156.1-142.5 125.7 0.4 -11.7 7.9 18 18 A E S S- 0 0 158 3,-0.8 2,-0.6 -2,-0.4 4,-0.0 -0.794 83.3 -55.0 -94.1 87.7 -1.7 -14.5 9.5 19 19 A G S S- 0 0 58 -2,-1.1 2,-0.6 1,-0.2 0, 0.0 -0.599 130.7 -6.2 74.9-107.4 -0.9 -17.2 7.0 20 20 A N S S+ 0 0 112 -2,-0.6 2,-0.2 -3,-0.0 -1,-0.2 -0.799 105.5 103.0-119.9 95.7 -1.9 -15.3 3.9 21 21 A K - 0 0 61 -2,-0.6 -3,-0.8 17,-0.1 2,-0.6 -0.763 52.2-158.1-167.7 103.8 -3.5 -12.1 5.0 22 22 A F E -CD 17 37A 22 15,-2.9 15,-2.6 -2,-0.2 2,-0.4 -0.870 10.0-177.2-104.1 122.2 -1.3 -9.0 4.6 23 23 A T E -CD 16 36A 41 -7,-2.3 -7,-1.4 -2,-0.6 2,-0.5 -0.897 11.1-153.7-113.9 139.0 -2.0 -5.8 6.7 24 24 A V E -CD 15 35A 21 11,-2.2 11,-2.3 -2,-0.4 2,-0.7 -0.968 3.2-153.1-117.5 127.8 0.0 -2.7 6.2 25 25 A K E -CD 14 34A 65 -11,-2.3 -11,-1.1 -2,-0.5 2,-0.6 -0.883 19.1-172.6-101.9 107.2 0.5 -0.1 8.9 26 26 A E E +CD 13 33A 15 7,-2.8 7,-2.7 -2,-0.7 2,-0.5 -0.899 15.5 168.1-110.8 118.6 1.1 3.3 7.4 27 27 A S E +CD 12 32A 12 -15,-2.4 -15,-1.1 -2,-0.6 2,-0.3 -0.970 20.8 144.3-124.1 115.6 2.1 6.4 9.4 28 28 A S E > - D 0 31A 8 3,-1.6 2,-2.5 -2,-0.5 3,-0.7 -0.989 63.2 -12.8-153.1 142.4 3.3 9.3 7.3 29 29 A N T 3 S- 0 0 157 -2,-0.3 3,-0.1 1,-0.2 -2,-0.0 -0.408 132.1 -30.6 67.2 -72.2 3.0 13.1 7.4 30 30 A F T 3 S+ 0 0 191 -2,-2.5 2,-0.3 1,-0.2 -1,-0.2 0.013 117.4 74.2-171.7 47.7 0.3 13.1 10.1 31 31 A R E < -D 28 0A 112 -3,-0.7 -3,-1.6 2,-0.0 2,-0.5 -0.876 52.1-153.5-166.1 132.8 -1.9 10.0 9.9 32 32 A N E +D 27 0A 79 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.3 -0.920 26.4 164.5-109.2 125.5 -1.6 6.3 10.8 33 33 A I E -D 26 0A 54 -7,-2.7 -7,-2.8 -2,-0.5 2,-0.4 -0.998 24.6-145.4-146.3 135.9 -3.8 3.9 8.8 34 34 A D E -D 25 0A 83 -2,-0.3 2,-0.5 -9,-0.2 -9,-0.2 -0.858 8.8-166.3-104.7 141.1 -3.8 0.2 8.3 35 35 A V E -D 24 0A 31 -11,-2.3 -11,-2.2 -2,-0.4 2,-0.4 -0.978 5.3-164.2-128.0 118.0 -4.8 -1.6 5.1 36 36 A V E +D 23 0A 79 -2,-0.5 2,-0.3 -13,-0.3 -13,-0.3 -0.820 14.4 168.6-104.8 139.8 -5.4 -5.3 5.1 37 37 A F E -D 22 0A 12 -15,-2.6 -15,-2.9 -2,-0.4 2,-0.3 -0.995 27.4-134.8-151.4 145.9 -5.6 -7.4 1.9 38 38 A E > - 0 0 70 -2,-0.3 3,-1.6 -17,-0.2 2,-0.5 -0.774 44.0 -91.6-103.8 144.1 -5.6 -11.0 0.8 39 39 A L T 3 S- 0 0 58 -2,-0.3 19,-0.2 1,-0.3 -1,-0.0 -0.451 109.1 -2.9 -63.0 112.3 -3.5 -12.2 -2.0 40 40 A G T 3 S+ 0 0 44 17,-2.9 2,-0.4 -2,-0.5 -1,-0.3 0.847 103.3 130.1 76.6 37.6 -5.5 -12.0 -5.2 41 41 A V E < -F 57 0C 48 -3,-1.6 16,-2.0 16,-1.1 2,-0.3 -0.937 51.4-134.5-126.3 145.6 -8.7 -10.7 -3.5 42 42 A D E +F 56 0C 119 -2,-0.4 2,-0.3 14,-0.3 14,-0.3 -0.776 33.1 160.4-101.8 138.6 -11.0 -7.8 -4.4 43 43 A F E -F 55 0C 39 12,-2.5 12,-2.8 -2,-0.3 2,-0.4 -0.990 30.7-136.4-158.0 149.9 -12.2 -5.5 -1.6 44 44 A A E +F 54 0C 66 -2,-0.3 2,-0.3 10,-0.3 10,-0.2 -0.888 30.5 161.7-114.0 142.0 -13.7 -2.1 -1.0 45 45 A Y E -F 53 0C 54 8,-1.1 8,-2.4 -2,-0.4 2,-0.5 -0.982 33.7-130.3-157.9 149.8 -12.6 0.2 1.8 46 46 A S E -F 52 0C 56 -2,-0.3 2,-0.5 6,-0.3 6,-0.3 -0.905 21.0-156.1-105.3 126.2 -12.7 3.8 2.9 47 47 A L E >> S-F 51 0C 41 4,-3.0 4,-1.9 -2,-0.5 3,-0.7 -0.898 76.1 -15.1-104.8 124.1 -9.4 5.4 4.0 48 48 A A T 34 S- 0 0 91 -2,-0.5 -1,-0.2 1,-0.2 -15,-0.0 0.800 117.7 -72.0 55.7 34.5 -9.6 8.3 6.4 49 49 A D T 34 S+ 0 0 149 -3,-0.2 -1,-0.2 2,-0.2 3,-0.1 0.924 129.6 67.4 50.4 50.0 -13.3 8.7 5.5 50 50 A G T <4 S+ 0 0 19 -3,-0.7 2,-0.8 1,-0.3 -2,-0.2 0.290 78.6 62.7-157.7 -56.0 -12.5 10.0 2.1 51 51 A T E < -F 47 0C 34 -4,-1.9 -4,-3.0 20,-0.1 2,-0.8 -0.780 55.9-174.8 -90.4 114.4 -10.9 7.6 -0.3 52 52 A E E -F 46 0C 101 -2,-0.8 19,-0.7 -6,-0.3 2,-0.6 -0.887 11.3-178.4-110.4 95.4 -13.2 4.7 -1.0 53 53 A L E -FG 45 70C 8 -8,-2.4 -8,-1.1 -2,-0.8 2,-0.6 -0.899 14.9-168.5-103.8 124.0 -11.3 2.3 -3.2 54 54 A T E +FG 44 69C 82 15,-1.9 15,-1.7 -2,-0.6 2,-0.3 -0.917 37.2 121.2-106.0 117.1 -12.7 -0.9 -4.5 55 55 A G E -FG 43 68C 8 -12,-2.8 -12,-2.5 -2,-0.6 2,-0.4 -0.993 56.7-106.9-167.3 165.7 -10.1 -3.1 -6.0 56 56 A T E -FG 42 67C 54 11,-0.8 11,-1.3 -2,-0.3 2,-0.5 -0.824 26.9-156.6-104.3 138.5 -8.2 -6.4 -6.1 57 57 A W E -FG 41 66C 19 -16,-2.0 -17,-2.9 -19,-0.4 -16,-1.1 -0.973 6.5-167.6-117.8 126.1 -4.6 -6.7 -4.8 58 58 A T E - G 0 65C 64 7,-3.5 7,-2.6 -2,-0.5 2,-0.6 -0.935 3.6-159.4-114.6 135.1 -2.3 -9.4 -6.0 59 59 A M E - G 0 64C 31 -2,-0.5 2,-0.2 5,-0.2 5,-0.2 -0.923 7.3-173.4-117.1 124.4 1.0 -10.3 -4.4 60 60 A E E > - G 0 63C 133 3,-3.2 3,-2.6 -2,-0.6 -2,-0.0 -0.633 53.5 -89.2-101.2 153.8 3.8 -12.1 -6.0 61 61 A G T 3 S+ 0 0 44 1,-0.3 -1,-0.1 -2,-0.2 3,-0.0 0.779 125.9 7.4 -36.7 -36.8 6.7 -13.0 -3.7 62 62 A N T 3 S+ 0 0 100 1,-0.1 21,-1.6 20,-0.0 2,-0.4 -0.065 118.9 85.6-138.4 36.5 8.3 -9.7 -4.5 63 63 A K E < -GH 60 82C 76 -3,-2.6 -3,-3.2 19,-0.2 2,-0.6 -0.962 48.8-169.5-143.8 123.5 5.6 -7.9 -6.5 64 64 A L E +GH 59 81C 12 17,-2.7 17,-3.0 -2,-0.4 2,-0.4 -0.946 24.2 157.7-113.2 113.0 2.7 -5.9 -5.3 65 65 A V E +G 58 0C 56 -7,-2.6 -7,-3.5 -2,-0.6 2,-0.2 -1.000 4.5 127.9-139.6 138.0 0.1 -5.1 -8.0 66 66 A G E -G 57 0C 15 13,-0.4 2,-0.3 -2,-0.4 -9,-0.2 -0.819 40.5-120.4-159.6-158.0 -3.5 -4.2 -8.0 67 67 A K E -G 56 0C 110 -11,-1.3 -11,-0.8 -2,-0.2 2,-0.4 -0.869 23.6-175.6-165.6 123.5 -6.2 -1.8 -9.2 68 68 A F E -G 55 0C 4 9,-0.4 9,-1.8 -2,-0.3 2,-0.5 -0.970 15.3-143.9-132.0 144.4 -8.5 0.3 -7.1 69 69 A K E -G 54 0C 106 -15,-1.7 -15,-1.9 -2,-0.4 2,-0.6 -0.937 11.5-175.3-110.8 123.6 -11.4 2.6 -7.9 70 70 A R E >>> -G 53 0C 44 -2,-0.5 5,-1.8 -17,-0.2 4,-1.5 -0.904 3.2-173.9-118.5 100.4 -12.1 5.8 -6.0 71 71 A V T 345S+ 0 0 103 -19,-0.7 2,-1.1 -2,-0.6 -1,-0.1 0.810 76.0 73.2 -62.0 -33.0 -15.3 7.4 -7.2 72 72 A D T 345S+ 0 0 104 -20,-0.2 -1,-0.3 -22,-0.2 -2,-0.0 -0.056 117.3 10.2 -79.4 40.8 -14.7 10.5 -4.9 73 73 A N T <45S- 0 0 94 -2,-1.1 -2,-0.2 -3,-0.6 -1,-0.1 0.034 138.6 -27.5-171.4 -62.4 -11.9 11.8 -7.2 74 74 A G T <5S- 0 0 24 -4,-1.5 -3,-0.2 21,-0.0 21,-0.2 0.142 74.3-110.3-167.1 34.0 -11.4 10.1 -10.5 75 75 A K S -IJ 77 97D 80 3,-1.8 2,-2.7 -2,-0.6 3,-1.5 -0.974 65.5 -34.5-120.5 124.7 -4.0 8.0 -10.5 95 95 A E T 3 S- 0 0 150 -19,-1.2 -2,-0.1 -2,-0.5 -18,-0.1 -0.396 129.9 -32.5 66.8 -69.4 -5.5 8.4 -14.0 96 96 A G T 3 S+ 0 0 43 -2,-2.7 2,-0.4 1,-0.1 -1,-0.3 0.125 113.3 99.3-169.9 32.8 -2.0 8.3 -15.6 97 97 A V E < -J 94 0D 96 -3,-1.5 -3,-1.8 2,-0.0 2,-0.6 -0.994 54.5-148.9-129.8 131.0 0.5 9.8 -13.2 98 98 A E E +J 93 0D 121 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.883 16.2 177.0-104.8 123.5 2.7 7.9 -10.9 99 99 A A E +J 92 0D 61 -7,-1.9 -7,-3.1 -2,-0.6 2,-0.4 -0.960 9.1 178.7-122.5 132.5 3.8 9.3 -7.5 100 100 A K E -J 91 0D 120 -2,-0.4 2,-0.3 -9,-0.3 -9,-0.2 -0.994 19.8-151.0-140.8 137.3 5.9 7.3 -5.2 101 101 A R E -J 90 0D 150 -11,-1.8 -11,-1.8 -2,-0.4 2,-0.5 -0.760 24.1-127.6-104.9 146.9 7.5 7.8 -1.8 102 102 A I E +J 89 0D 97 -2,-0.3 2,-0.3 -13,-0.2 -13,-0.2 -0.865 33.5 162.5-103.2 129.7 10.7 5.9 -0.9 103 103 A F E -J 88 0D 4 -15,-1.1 -15,-0.8 -2,-0.5 2,-0.3 -0.887 16.9-155.6-135.4 165.8 11.1 3.8 2.3 104 104 A K E -J 87 0D 78 -17,-0.3 -97,-0.9 -2,-0.3 -17,-0.3 -0.959 36.8 -78.8-141.2 159.5 13.5 1.2 3.5 105 105 A K B E 6 0B 69 -19,-1.1 -99,-0.3 -2,-0.3 -19,-0.1 -0.300 360.0 360.0 -56.9 134.7 13.5 -1.7 6.0 106 106 A E 0 0 147 -101,-2.5 -100,-0.2 -93,-0.1 -1,-0.1 0.939 360.0 360.0 -75.1 360.0 14.0 -0.4 9.5