==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, TRANSCRIPTION, PROT23-FEB-04 1SG5 . COMPND 2 MOLECULE: ORF, HYPOTHETICAL PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR P.GUTIERREZ,K.GEHRING,MONTREAL-KINGSTON BACTERIAL . 86 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6492.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 57.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 25.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 250 0, 0.0 2,-0.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -59.9 -19.3 17.2 5.4 2 2 A S + 0 0 109 1,-0.1 3,-0.1 0, 0.0 0, 0.0 -0.940 360.0 164.0-115.5 131.0 -17.5 13.9 4.8 3 3 A M + 0 0 184 -2,-0.5 2,-0.4 1,-0.1 -1,-0.1 0.668 63.0 68.6-112.0 -30.4 -18.5 11.5 2.0 4 4 A N + 0 0 157 2,-0.0 2,-0.2 0, 0.0 -1,-0.1 -0.783 61.2 171.2 -97.1 135.9 -15.3 9.3 1.8 5 5 A D - 0 0 116 -2,-0.4 -2,-0.0 -3,-0.1 0, 0.0 -0.746 28.6-164.4-131.9 179.2 -14.4 7.0 4.7 6 6 A T + 0 0 127 -2,-0.2 2,-0.9 2,-0.0 -2,-0.0 0.028 41.3 133.2-158.0 32.3 -11.8 4.2 5.4 7 7 A Y - 0 0 201 5,-0.0 77,-0.1 2,-0.0 3,-0.0 -0.798 31.1-177.2 -95.9 101.7 -13.2 2.5 8.5 8 8 A Q - 0 0 31 -2,-0.9 4,-0.1 77,-0.2 45,-0.1 -0.787 30.1-135.7-100.7 141.3 -13.0 -1.3 8.0 9 9 A P S S- 0 0 7 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.865 81.1 -49.9 -61.1 -36.8 -14.3 -3.8 10.6 10 10 A I S S+ 0 0 6 1,-0.5 75,-0.5 73,-0.3 2,-0.3 0.066 121.5 43.1-160.6 -75.0 -11.2 -6.0 10.1 11 11 A N - 0 0 1 41,-0.2 -1,-0.5 73,-0.1 5,-0.1 -0.671 66.7-149.8 -92.6 145.6 -10.2 -6.9 6.6 12 12 A C - 0 0 45 -2,-0.3 4,-0.2 -4,-0.1 -1,-0.1 -0.094 34.3 -85.6 -96.1-163.0 -10.2 -4.4 3.7 13 13 A D S S+ 0 0 133 2,-0.1 4,-0.4 3,-0.1 -1,-0.0 0.996 119.3 5.1 -70.5 -68.9 -10.8 -4.9 -0.1 14 14 A D S >> S+ 0 0 112 2,-0.2 3,-1.8 1,-0.2 4,-1.7 0.902 126.8 62.7 -82.7 -46.8 -7.3 -5.8 -1.3 15 15 A Y H 3> S+ 0 0 108 1,-0.3 4,-1.8 2,-0.2 5,-0.2 0.734 100.9 58.1 -51.5 -22.8 -5.6 -6.0 2.1 16 16 A D H 3> S+ 0 0 6 2,-0.2 4,-1.7 -4,-0.2 -1,-0.3 0.804 103.4 50.4 -77.5 -32.2 -8.0 -8.9 2.8 17 17 A N H <> S+ 0 0 120 -3,-1.8 4,-1.1 -4,-0.4 5,-0.2 0.870 118.1 37.4 -73.3 -39.4 -6.8 -10.9 -0.2 18 18 A L H X>S+ 0 0 122 -4,-1.7 4,-2.1 3,-0.2 5,-1.1 0.823 118.1 49.7 -82.5 -34.4 -3.2 -10.6 0.7 19 19 A E H X>S+ 0 0 4 -4,-1.8 5,-2.1 -5,-0.3 4,-0.6 0.926 113.7 44.1 -70.7 -47.0 -3.7 -10.9 4.5 20 20 A L H <>S+ 0 0 14 -4,-1.7 6,-1.4 3,-0.2 5,-0.6 0.876 123.9 36.0 -67.8 -35.9 -5.9 -14.0 4.3 21 21 A A H <5S+ 0 0 49 -4,-1.1 -2,-0.2 3,-0.2 -3,-0.2 0.960 134.8 20.9 -80.4 -57.4 -3.7 -15.7 1.8 22 22 A C H <5S+ 0 0 78 -4,-2.1 -3,-0.2 -5,-0.2 -2,-0.1 0.865 135.8 35.3 -80.8 -39.7 -0.2 -14.6 2.9 23 23 A Q T < > - 0 0 48 4,-0.4 4,-1.1 -2,-0.3 3,-1.1 -0.859 41.4 -97.7-124.3 160.3 -10.3 -11.5 21.6 33 33 A K T 34 S+ 0 0 181 1,-0.3 2,-0.4 -2,-0.3 -1,-0.1 0.815 121.7 69.2 -41.6 -35.3 -9.7 -9.0 24.4 34 34 A D T 34 S- 0 0 154 1,-0.1 -1,-0.3 0, 0.0 3,-0.1 0.023 127.0-102.3 -76.0 30.9 -10.6 -11.9 26.7 35 35 A G T <4 + 0 0 66 -3,-1.1 -2,-0.2 -2,-0.4 -1,-0.1 0.774 66.8 168.8 52.9 28.9 -7.3 -13.4 25.6 36 36 A E < + 0 0 91 -4,-1.1 -4,-0.4 2,-0.0 2,-0.3 -0.387 10.5 177.9 -71.2 150.9 -9.2 -15.7 23.2 37 37 A K + 0 0 131 -6,-0.2 2,-0.3 -3,-0.1 -6,-0.2 -0.850 8.7 153.5-159.1 117.9 -7.2 -17.6 20.6 38 38 A L E -A 30 0A 56 -8,-1.8 -8,-3.2 -2,-0.3 2,-0.3 -0.960 28.6-141.7-152.6 131.7 -8.4 -20.1 18.0 39 39 A Q E -A 29 0A 118 -2,-0.3 2,-0.4 -10,-0.3 -10,-0.3 -0.665 16.6-161.6 -91.6 145.0 -7.1 -21.3 14.7 40 40 A A E -A 28 0A 12 -12,-2.1 -12,-1.4 -2,-0.3 2,-0.2 -0.991 12.8-133.4-133.0 129.1 -9.5 -22.1 11.8 41 41 A K S S+ 0 0 116 -2,-0.4 18,-0.4 -14,-0.2 -14,-0.2 -0.538 72.8 2.7 -79.1 141.4 -8.8 -24.1 8.7 42 42 A A S S+ 0 0 19 -2,-0.2 2,-0.2 -17,-0.2 -14,-0.2 0.469 71.7 171.8 60.5 148.2 -9.9 -22.7 5.3 43 43 A S - 0 0 17 13,-0.3 13,-0.3 -16,-0.1 2,-0.3 -0.859 18.7-179.5 176.0 150.1 -11.5 -19.3 4.9 44 44 A D E -D 55 0B 91 11,-2.9 11,-2.8 -2,-0.2 2,-0.3 -0.851 27.7-114.6-146.0 175.2 -12.7 -16.6 2.5 45 45 A L E -D 54 0B 47 9,-0.3 2,-0.4 -2,-0.3 9,-0.3 -0.883 14.6-159.1-123.3 157.3 -14.3 -13.2 3.0 46 46 A V E -D 53 0B 80 7,-3.0 7,-2.7 -2,-0.3 2,-0.6 -0.997 10.7-146.2-132.8 133.8 -17.7 -11.6 2.2 47 47 A S - 0 0 85 -2,-0.4 5,-0.3 5,-0.3 2,-0.1 -0.893 12.5-145.3-107.7 119.2 -18.4 -7.9 1.9 48 48 A R - 0 0 168 -2,-0.6 -2,-0.0 3,-0.2 0, 0.0 -0.424 29.5-109.6 -76.1 151.2 -21.8 -6.6 3.0 49 49 A K S S+ 0 0 211 1,-0.2 -1,-0.1 -2,-0.1 3,-0.1 0.739 122.6 34.8 -52.1 -23.7 -23.4 -3.8 1.1 50 50 A N S S- 0 0 149 1,-0.0 -1,-0.2 0, 0.0 2,-0.2 0.759 134.8 -19.3-101.6 -34.1 -22.7 -1.6 4.2 51 51 A V S S- 0 0 35 -43,-0.0 2,-0.3 2,-0.0 -3,-0.2 -0.596 70.2 -93.3-148.3-151.2 -19.4 -3.1 5.4 52 52 A E + 0 0 32 -5,-0.3 2,-0.3 -2,-0.2 -42,-0.3 -0.970 30.0 177.1-149.2 131.1 -17.2 -6.2 5.1 53 53 A Y E -D 46 0B 56 -7,-2.7 -7,-3.0 -2,-0.3 2,-0.3 -0.915 26.3-119.9-129.7 157.7 -16.8 -9.4 7.2 54 54 A L E -DE 45 65B 0 11,-0.6 11,-1.0 -2,-0.3 2,-0.5 -0.731 19.3-160.6 -97.5 146.4 -14.7 -12.5 6.9 55 55 A V E -DE 44 64B 21 -11,-2.8 -11,-2.9 -2,-0.3 2,-0.4 -0.952 7.7-171.7-130.9 112.8 -16.2 -16.0 6.6 56 56 A V E - E 0 63B 1 7,-1.2 7,-2.2 -2,-0.5 2,-0.7 -0.847 22.4-127.7-107.9 141.3 -14.2 -19.1 7.4 57 57 A E E - E 0 62B 97 -2,-0.4 2,-1.3 5,-0.2 5,-0.2 -0.756 15.5-152.5 -88.6 117.0 -15.2 -22.7 6.8 58 58 A A E > - E 0 61B 32 3,-2.7 2,-2.6 -2,-0.7 3,-2.2 -0.679 56.4 -76.2 -91.9 85.1 -14.9 -24.8 9.9 59 59 A A T 3 S- 0 0 90 -2,-1.3 -1,-0.1 -18,-0.4 3,-0.1 -0.353 119.6 -9.2 62.9 -76.8 -14.3 -28.3 8.6 60 60 A G T 3 S+ 0 0 57 -2,-2.6 2,-0.4 1,-0.1 -1,-0.3 0.278 126.0 74.9-133.4 7.6 -17.9 -28.9 7.6 61 61 A E E < S-E 58 0B 143 -3,-2.2 -3,-2.7 -5,-0.0 -1,-0.1 -0.984 76.4-126.2-129.1 124.3 -19.7 -25.9 9.1 62 62 A T E -E 57 0B 95 -2,-0.4 2,-0.3 -5,-0.2 -5,-0.2 -0.404 31.2-172.7 -67.3 139.2 -19.5 -22.3 7.8 63 63 A R E -E 56 0B 157 -7,-2.2 -7,-1.2 -2,-0.1 2,-0.5 -0.958 19.2-141.8-134.9 152.7 -18.5 -19.7 10.3 64 64 A E E +E 55 0B 100 -2,-0.3 2,-0.4 -9,-0.3 -9,-0.2 -0.939 25.1 170.4-119.9 111.0 -18.3 -15.9 10.3 65 65 A L E +E 54 0B 27 -11,-1.0 -11,-0.6 -2,-0.5 -2,-0.0 -0.977 62.8 27.8-124.6 133.5 -15.3 -14.3 12.0 66 66 A R S > S+ 0 0 0 -2,-0.4 3,-1.1 -13,-0.2 -1,-0.1 0.253 85.2 107.6 102.4 -5.1 -14.3 -10.5 11.9 67 67 A L T 3 S+ 0 0 74 -13,-0.3 -2,-0.1 1,-0.2 -15,-0.0 0.610 81.9 47.5 -75.7 -13.3 -17.9 -9.5 11.3 68 68 A D T 3 S- 0 0 98 -4,-0.1 -1,-0.2 -59,-0.0 3,-0.1 0.187 121.8-104.9-110.8 12.3 -18.0 -8.2 14.9 69 69 A K < - 0 0 127 -3,-1.1 2,-0.3 1,-0.1 -2,-0.1 0.998 42.8-144.4 60.4 68.9 -14.7 -6.3 14.6 70 70 A I - 0 0 6 1,-0.1 13,-1.5 -38,-0.1 14,-0.2 -0.523 14.9-118.8 -73.0 128.4 -12.7 -8.8 16.6 71 71 A T S S- 0 0 30 -2,-0.3 12,-0.5 11,-0.2 2,-0.3 0.799 82.5 -25.3 -28.0 -61.8 -10.0 -7.2 18.8 72 72 A S E -B 31 0A 10 -41,-1.9 -41,-2.6 10,-0.3 2,-0.4 -0.995 46.5-151.8-161.4 157.3 -7.2 -9.0 17.0 73 73 A F E -BC 30 81A 2 8,-1.8 8,-2.2 -2,-0.3 2,-0.3 -0.992 19.9-164.6-135.6 122.8 -6.2 -12.0 14.9 74 74 A S E -BC 29 80A 24 -45,-2.0 -45,-1.3 -2,-0.4 6,-0.2 -0.796 7.3-164.9-111.4 154.1 -2.7 -13.4 14.9 75 75 A H E >> - C 0 79A 33 4,-1.6 3,-2.6 -2,-0.3 4,-1.3 -0.997 38.0 -95.1-138.2 129.3 -0.8 -15.8 12.6 76 76 A P T 34 S- 0 0 91 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.146 108.2 -3.1 -45.7 122.8 2.5 -17.6 13.4 77 77 A E T 34 S+ 0 0 206 1,-0.1 -3,-0.0 0, 0.0 0, 0.0 0.677 127.5 74.9 66.3 19.1 5.4 -15.7 12.0 78 78 A I T <4 S- 0 0 66 -3,-2.6 2,-0.3 1,-0.1 -1,-0.1 0.659 89.7-105.7-121.3 -68.7 3.1 -13.2 10.5 79 79 A G E < -C 75 0A 33 -4,-1.3 -4,-1.6 -56,-0.2 2,-0.4 -0.931 21.7 -82.4 159.2 179.8 1.5 -10.7 12.9 80 80 A T E -C 74 0A 72 -2,-0.3 2,-0.5 -6,-0.2 -6,-0.3 -0.971 32.0-164.6-120.3 127.7 -1.5 -9.6 14.9 81 81 A V E -C 73 0A 9 -8,-2.2 -8,-1.8 -2,-0.4 2,-0.4 -0.950 4.5-156.9-116.8 127.6 -4.2 -7.4 13.4 82 82 A V - 0 0 65 -2,-0.5 -10,-0.3 -10,-0.3 -11,-0.2 -0.858 66.2 -38.7-103.8 134.1 -6.8 -5.5 15.6 83 83 A V S S- 0 0 54 -13,-1.5 -73,-0.3 -12,-0.5 -1,-0.2 0.701 125.3 -36.3 14.5 66.0 -10.2 -4.4 14.2 84 84 A S S S- 0 0 13 -14,-0.2 -2,-0.2 -3,-0.1 -73,-0.1 0.481 96.8 -59.6 69.7 143.1 -8.5 -3.5 10.9 85 85 A E 0 0 130 -75,-0.5 -77,-0.2 1,-0.2 -4,-0.1 -0.313 360.0 360.0 -56.3 125.9 -5.1 -2.0 10.6 86 86 A S 0 0 167 -4,-0.1 -1,-0.2 -2,-0.1 -2,-0.1 -0.307 360.0 360.0-177.9 360.0 -4.9 1.3 12.5