==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TYROSINE-PROTEIN KINASE 08-JAN-99 1SGG . COMPND 2 MOLECULE: EPHRIN TYPE-B RECEPTOR 2; . SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; . AUTHOR M.SMALLA,P.SCHMIEDER,M.KELLY,A.TER LAAK,G.KRAUSE,L.BALL, . 67 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4457.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 73.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 23.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 40.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 7 A Y > 0 0 83 0, 0.0 3,-0.5 0, 0.0 61,-0.0 0.000 360.0 360.0 360.0 41.9 3.3 9.1 -3.4 2 8 A T T 3 + 0 0 123 1,-0.2 0, 0.0 3,-0.0 0, 0.0 0.075 360.0 82.4 -92.4 29.0 2.0 10.7 -6.7 3 9 A S T 3 + 0 0 107 6,-0.0 2,-0.3 0, 0.0 -1,-0.2 0.090 65.1 109.2-116.3 23.0 4.5 8.6 -8.8 4 10 A F < - 0 0 60 -3,-0.5 3,-0.1 1,-0.1 4,-0.0 -0.736 51.5-160.0 -99.6 149.0 2.4 5.4 -8.9 5 11 A N S S- 0 0 142 1,-0.3 2,-0.3 -2,-0.3 -1,-0.1 0.828 71.0 -24.8 -94.4 -37.1 0.6 4.1 -12.1 6 12 A T S >> S- 0 0 78 24,-0.1 3,-1.7 1,-0.0 4,-1.6 -0.959 81.5 -72.4-161.5 177.1 -1.9 1.8 -10.5 7 13 A V H 3> S+ 0 0 10 22,-0.4 4,-3.1 -2,-0.3 5,-0.4 0.824 126.4 66.9 -51.7 -26.0 -2.6 -0.2 -7.3 8 14 A D H 3> S+ 0 0 82 1,-0.2 4,-1.0 2,-0.2 -1,-0.3 0.912 102.5 43.6 -63.1 -39.2 0.0 -2.6 -8.8 9 15 A E H <> S+ 0 0 86 -3,-1.7 4,-0.8 2,-0.2 -1,-0.2 0.834 117.7 46.4 -75.8 -30.0 2.7 0.1 -8.3 10 16 A W H >X S+ 0 0 7 -4,-1.6 3,-1.0 2,-0.2 4,-1.0 0.969 113.2 45.0 -76.6 -55.1 1.4 1.0 -4.8 11 17 A L H 3<>S+ 0 0 3 -4,-3.1 5,-0.8 1,-0.3 3,-0.2 0.822 107.7 63.0 -59.5 -25.6 1.0 -2.6 -3.4 12 18 A D H ><5S+ 0 0 95 -4,-1.0 3,-1.3 -5,-0.4 -1,-0.3 0.876 97.3 55.3 -67.8 -33.9 4.5 -3.3 -4.9 13 19 A A H <<5S+ 0 0 68 -3,-1.0 -1,-0.2 -4,-0.8 -2,-0.2 0.809 111.3 44.6 -69.3 -26.1 6.0 -0.7 -2.6 14 20 A I T 3<5S- 0 0 15 -4,-1.0 -1,-0.3 -3,-0.2 -2,-0.2 0.204 120.2-107.9-102.0 17.9 4.5 -2.6 0.4 15 21 A K T < 5 + 0 0 161 -3,-1.3 -3,-0.2 1,-0.1 3,-0.1 0.989 62.8 152.2 56.5 75.9 5.5 -6.0 -0.9 16 22 A M > < + 0 0 0 -5,-0.8 3,-1.6 -8,-0.1 -1,-0.1 -0.260 7.9 143.0-129.9 48.0 2.1 -7.4 -1.9 17 23 A S G > S+ 0 0 96 1,-0.3 3,-0.7 2,-0.1 -1,-0.1 0.923 79.1 45.1 -55.8 -44.4 3.0 -9.9 -4.7 18 24 A Q G 3 S+ 0 0 117 1,-0.2 -1,-0.3 -3,-0.1 -2,-0.0 -0.059 100.0 75.0 -91.7 37.7 0.3 -12.4 -3.6 19 25 A Y G <> + 0 0 4 -3,-1.6 4,-1.1 -2,-0.1 -1,-0.2 0.139 64.4 97.6-131.4 19.8 -2.3 -9.6 -3.2 20 26 A K H X> S+ 0 0 68 -3,-0.7 4,-1.3 2,-0.2 3,-1.2 0.964 95.0 24.4 -73.2 -81.8 -3.2 -8.8 -6.8 21 27 A E H 3> S+ 0 0 162 1,-0.3 4,-1.1 2,-0.2 -1,-0.1 0.782 118.0 68.6 -56.0 -21.8 -6.4 -10.8 -7.6 22 28 A S H 3> S+ 0 0 34 1,-0.2 4,-1.0 2,-0.2 3,-0.4 0.928 101.9 42.2 -65.2 -42.1 -7.0 -10.7 -3.8 23 29 A F H S+ 0 0 1 -3,-1.2 5,-2.7 -4,-1.1 4,-2.2 0.758 104.6 67.2 -76.5 -21.5 -7.6 -6.9 -3.9 24 30 A A H <5S+ 0 0 47 -4,-1.3 -1,-0.2 3,-0.2 -2,-0.2 0.835 97.8 53.9 -68.0 -29.0 -9.7 -7.2 -7.1 25 31 A S H <5S+ 0 0 106 -4,-1.1 -1,-0.2 -3,-0.4 -2,-0.2 0.962 113.7 38.6 -71.0 -49.9 -12.4 -9.1 -5.1 26 32 A A H <5S- 0 0 40 -4,-1.0 -2,-0.2 15,-0.1 -1,-0.2 0.874 119.7-107.8 -69.2 -34.1 -12.9 -6.5 -2.4 27 33 A G T <5S+ 0 0 16 -4,-2.2 7,-0.4 -5,-0.1 2,-0.4 0.605 77.4 132.3 115.1 20.7 -12.5 -3.7 -5.0 28 34 A F < + 0 0 6 -5,-2.7 -4,-0.2 5,-0.2 -5,-0.1 -0.195 32.4 113.0 -95.4 44.9 -9.0 -2.3 -4.0 29 35 A T S S+ 0 0 69 -2,-0.4 -22,-0.4 -6,-0.2 2,-0.3 0.197 76.8 32.4-100.0 18.4 -7.8 -2.3 -7.7 30 36 A T S > S- 0 0 65 -3,-0.3 2,-1.5 -24,-0.1 4,-0.5 -0.941 97.3 -81.4-157.0 178.4 -7.6 1.5 -7.9 31 37 A F T 4 S+ 0 0 53 -2,-0.3 -3,-0.1 1,-0.1 -2,-0.0 -0.586 112.5 38.4 -91.5 79.5 -6.9 4.7 -5.9 32 38 A D T >4 S+ 0 0 105 -2,-1.5 3,-1.4 0, 0.0 -1,-0.1 -0.196 104.1 50.7-178.9 -76.2 -10.3 5.2 -4.2 33 39 A I G >4 S+ 0 0 82 1,-0.3 3,-0.7 -6,-0.2 -5,-0.2 0.954 113.2 49.8 -49.0 -55.4 -12.2 2.1 -3.0 34 40 A V G >< S+ 0 0 0 -4,-0.5 3,-0.5 -7,-0.4 2,-0.4 0.737 99.4 71.3 -59.1 -17.4 -9.1 0.8 -1.1 35 41 A S G < S+ 0 0 6 -3,-1.4 -1,-0.3 1,-0.2 -2,-0.1 -0.134 92.7 57.6 -91.5 42.3 -8.9 4.3 0.4 36 42 A Q G < S+ 0 0 147 -3,-0.7 -1,-0.2 -2,-0.4 2,-0.2 -0.043 92.7 65.4-160.5 43.4 -12.0 3.7 2.5 37 43 A M < - 0 0 28 -3,-0.5 2,-0.2 20,-0.1 -3,-0.0 -0.740 54.6-149.9-147.7-163.5 -11.4 0.6 4.7 38 44 A T > - 0 0 69 -2,-0.2 4,-1.2 22,-0.0 3,-0.4 -0.649 54.9 -51.5-152.3-150.0 -9.3 -0.7 7.6 39 45 A V H > S+ 0 0 56 1,-0.2 4,-1.6 -2,-0.2 5,-0.2 0.817 125.4 65.9 -71.8 -27.6 -7.8 -3.9 9.0 40 46 A E H 4 S+ 0 0 135 1,-0.2 4,-0.5 2,-0.2 -1,-0.2 0.857 103.2 46.9 -63.2 -31.5 -11.2 -5.6 8.9 41 47 A D H >> S+ 0 0 43 -3,-0.4 4,-2.1 2,-0.2 3,-0.8 0.871 104.1 60.4 -78.8 -35.6 -11.2 -5.4 5.1 42 48 A I H 3X>S+ 0 0 0 -4,-1.2 5,-2.0 1,-0.3 4,-0.8 0.908 102.4 52.9 -59.2 -39.3 -7.6 -6.7 4.8 43 49 A L H 3<5S+ 0 0 102 -4,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.763 108.6 52.4 -68.9 -20.9 -8.7 -10.0 6.4 44 50 A R H <45S+ 0 0 192 -3,-0.8 -2,-0.2 -4,-0.5 -1,-0.2 0.926 99.3 58.6 -81.2 -46.1 -11.5 -10.3 3.9 45 51 A V H <5S- 0 0 10 -4,-2.1 -1,-0.2 1,-0.1 -2,-0.2 0.776 128.1 -96.2 -55.3 -21.5 -9.4 -9.8 0.7 46 52 A G T <5S+ 0 0 38 -4,-0.8 2,-0.8 -5,-0.2 3,-0.4 0.641 79.2 141.9 112.4 23.7 -7.5 -12.9 2.0 47 53 A V < + 0 0 0 -5,-2.0 6,-0.2 1,-0.2 -3,-0.1 -0.188 13.5 141.7 -89.2 46.4 -4.5 -11.2 3.8 48 54 A T + 0 0 105 -2,-0.8 -1,-0.2 -5,-0.2 5,-0.1 0.782 35.8 112.5 -59.0 -22.4 -4.5 -13.8 6.6 49 55 A L S > S- 0 0 85 -3,-0.4 4,-1.7 1,-0.1 -3,-0.0 -0.299 75.7-121.9 -53.7 121.4 -0.7 -13.5 6.5 50 56 A A T 4 S+ 0 0 77 1,-0.2 2,-3.5 2,-0.2 -1,-0.1 -0.175 91.1 15.7 -61.6 160.8 0.3 -11.9 9.8 51 57 A G T > S+ 0 0 44 1,-0.2 4,-2.3 4,-0.0 3,-0.3 -0.275 117.7 69.4 71.0 -63.0 2.3 -8.6 9.6 52 58 A H H > S+ 0 0 36 -2,-3.5 4,-1.7 1,-0.2 5,-0.2 0.899 96.2 54.4 -53.8 -37.8 1.3 -8.3 5.9 53 59 A Q H X S+ 0 0 48 -4,-1.7 4,-0.8 1,-0.2 -1,-0.2 0.919 111.9 42.6 -64.1 -40.1 -2.2 -7.6 7.1 54 60 A K H > S+ 0 0 138 -3,-0.3 4,-1.1 2,-0.2 -1,-0.2 0.760 105.9 66.7 -77.7 -21.9 -1.0 -4.8 9.4 55 61 A K H >X S+ 0 0 95 -4,-2.3 4,-1.0 1,-0.2 3,-0.6 0.981 105.1 39.3 -63.3 -55.1 1.3 -3.5 6.7 56 62 A I H 3X S+ 0 0 0 -4,-1.7 4,-2.7 1,-0.2 5,-0.2 0.778 100.0 80.9 -66.9 -21.8 -1.4 -2.4 4.3 57 63 A L H 3< S+ 0 0 49 -4,-0.8 4,-0.3 1,-0.3 -1,-0.2 0.946 102.6 32.7 -49.5 -51.7 -3.4 -1.1 7.3 58 64 A N H X< S+ 0 0 107 -4,-1.1 3,-0.8 -3,-0.6 4,-0.4 0.761 112.8 65.5 -77.9 -22.3 -1.3 2.1 7.4 59 65 A S H >X S+ 0 0 8 -4,-1.0 3,-2.5 1,-0.2 4,-0.5 0.922 87.6 66.3 -66.4 -41.1 -1.0 2.0 3.6 60 66 A I H >X S+ 0 0 7 -4,-2.7 4,-1.0 1,-0.3 3,-0.7 0.792 96.3 60.0 -51.7 -23.5 -4.8 2.6 3.1 61 67 A Q H <> S+ 0 0 123 -3,-0.8 4,-2.3 -4,-0.3 -1,-0.3 0.748 81.9 79.6 -78.6 -21.4 -4.1 6.0 4.7 62 68 A V H <> S+ 0 0 42 -3,-2.5 4,-0.6 -4,-0.4 -1,-0.2 0.798 100.3 42.8 -57.4 -22.3 -1.6 6.9 1.9 63 69 A M H XX S+ 0 0 0 -3,-0.7 4,-2.0 -4,-0.5 3,-0.6 0.931 114.3 44.3 -88.7 -55.1 -4.8 7.7 -0.2 64 70 A R H 3< S+ 0 0 165 -4,-1.0 -2,-0.2 1,-0.2 -3,-0.1 0.762 101.4 75.7 -61.6 -20.0 -7.0 9.5 2.3 65 71 A A H 3< S+ 0 0 82 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.966 111.9 20.6 -57.3 -52.6 -3.8 11.5 3.3 66 72 A Q H << 0 0 109 -3,-0.6 -1,-0.2 -4,-0.6 -2,-0.2 0.711 360.0 360.0 -90.1 -20.3 -3.9 13.7 0.2 67 73 A M < 0 0 120 -4,-2.0 -2,-0.2 -5,-0.1 -3,-0.2 0.769 360.0 360.0 -73.9 360.0 -7.7 13.1 -0.5