==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 11-MAR-04 1SNL . COMPND 2 MOLECULE: NUCLEOBINDIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR E.DE ALBA,N.TJANDRA . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9458.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 61.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 38 38.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A L 0 0 221 0, 0.0 2,-1.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 89.2 32.6 17.1 0.9 2 2 A K + 0 0 193 1,-0.2 0, 0.0 2,-0.0 0, 0.0 -0.745 360.0 176.4 -95.4 95.6 30.7 20.4 1.2 3 3 A E + 0 0 173 -2,-1.1 -1,-0.2 2,-0.0 3,-0.0 0.996 15.8 168.7 -62.3 -62.3 27.2 19.5 2.5 4 4 A V - 0 0 101 1,-0.1 2,-1.0 2,-0.0 -2,-0.0 0.420 54.5 -70.0 59.8 148.7 25.9 23.1 2.7 5 5 A W - 0 0 246 2,-0.0 -1,-0.1 1,-0.0 -2,-0.0 -0.582 57.3-144.5 -74.4 104.9 22.1 23.6 3.4 6 6 A E - 0 0 171 -2,-1.0 2,-0.1 1,-0.0 -2,-0.0 -0.124 16.5-170.4 -61.7 167.4 20.5 22.5 0.1 7 7 A E - 0 0 172 2,-0.0 -1,-0.0 0, 0.0 -2,-0.0 -0.530 7.7-156.1-164.6 90.6 17.5 24.5 -1.1 8 8 A L - 0 0 123 -2,-0.1 2,-0.3 2,-0.0 0, 0.0 -0.292 15.0-163.4 -66.2 155.7 15.3 23.3 -4.1 9 9 A D + 0 0 148 1,-0.0 -2,-0.0 0, 0.0 -1,-0.0 -0.982 65.5 11.6-140.3 152.2 13.3 25.9 -5.9 10 10 A G S S- 0 0 73 -2,-0.3 -2,-0.0 1,-0.1 -1,-0.0 0.431 119.6 -84.6 64.4 -11.4 10.3 25.8 -8.3 11 11 A L - 0 0 142 2,-0.0 -1,-0.1 4,-0.0 4,-0.1 0.836 52.4 -98.4 76.7 101.4 10.2 22.1 -7.2 12 12 A D - 0 0 68 1,-0.2 -2,-0.0 2,-0.1 -4,-0.0 -0.108 35.4-106.8 -46.3 150.1 12.6 20.0 -9.3 13 13 A P S S+ 0 0 136 0, 0.0 2,-2.3 0, 0.0 -1,-0.2 0.323 89.6 118.1 -65.0 14.1 10.8 18.2 -12.2 14 14 A N - 0 0 122 3,-0.0 -2,-0.1 0, 0.0 3,-0.0 -0.344 51.7-172.2 -80.5 63.1 11.3 15.1 -10.0 15 15 A R - 0 0 179 -2,-2.3 -4,-0.0 -4,-0.1 -3,-0.0 0.072 37.9 -72.4 -47.0 169.5 7.6 14.4 -9.7 16 16 A F - 0 0 180 1,-0.1 3,-0.1 2,-0.0 0, 0.0 0.167 41.5-142.6 -53.8-173.8 6.6 11.7 -7.3 17 17 A N >> + 0 0 79 1,-0.1 3,-1.2 2,-0.0 4,-0.7 -0.333 32.2 160.6-156.7 67.0 7.2 8.0 -8.3 18 18 A P H 3> + 0 0 60 0, 0.0 4,-1.5 0, 0.0 -1,-0.1 0.704 67.6 81.6 -63.8 -18.7 4.4 5.7 -7.2 19 19 A K H 3> S+ 0 0 128 1,-0.2 4,-1.2 2,-0.2 -2,-0.0 0.885 89.7 49.6 -56.2 -39.6 5.7 3.2 -9.8 20 20 A T H <> S+ 0 0 74 -3,-1.2 4,-2.3 1,-0.2 3,-0.4 0.915 102.0 59.7 -70.9 -38.9 8.4 2.0 -7.4 21 21 A F H X S+ 0 0 90 -4,-0.7 4,-1.6 1,-0.3 -1,-0.2 0.898 104.6 53.4 -56.0 -34.3 6.1 1.4 -4.5 22 22 A F H X S+ 0 0 5 -4,-1.5 4,-0.6 2,-0.2 -1,-0.3 0.885 109.7 47.6 -68.8 -35.2 4.3 -1.0 -6.8 23 23 A I H >< S+ 0 0 99 -4,-1.2 3,-2.6 -3,-0.4 -2,-0.2 0.993 108.6 50.9 -69.9 -60.4 7.6 -2.9 -7.5 24 24 A L H 3< S+ 0 0 145 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.871 112.8 48.5 -45.9 -38.6 8.7 -3.2 -3.9 25 25 A H H 3< S+ 0 0 59 -4,-1.6 2,-1.4 -5,-0.3 -1,-0.3 0.675 89.7 93.3 -78.9 -11.9 5.2 -4.7 -3.0 26 26 A D << + 0 0 30 -3,-2.6 -1,-0.1 -4,-0.6 3,-0.1 -0.615 47.8 164.9 -81.7 92.8 5.5 -7.0 -6.0 27 27 A I S S+ 0 0 115 -2,-1.4 -1,-0.2 1,-0.2 -2,-0.0 0.957 78.3 33.2 -75.7 -51.6 7.0 -10.1 -4.3 28 28 A N S S- 0 0 126 1,-0.0 -1,-0.2 0, 0.0 -2,-0.1 0.329 104.9-127.4 -87.9 12.9 6.3 -12.8 -7.0 29 29 A S + 0 0 100 -6,-0.2 -3,-0.1 1,-0.1 -2,-0.1 0.929 60.4 145.0 43.3 55.7 6.9 -10.1 -9.7 30 30 A D - 0 0 65 2,-0.4 -1,-0.1 0, 0.0 3,-0.1 0.513 63.5-123.3 -97.9 -6.2 3.5 -11.0 -11.4 31 31 A G S S+ 0 0 35 1,-0.2 56,-0.7 -9,-0.1 2,-0.3 0.425 88.9 66.7 78.8 -3.7 2.9 -7.3 -12.3 32 32 A V E S-A 86 0A 35 54,-0.2 2,-0.5 55,-0.1 -2,-0.4 -0.950 75.9-131.6-140.9 163.2 -0.4 -7.5 -10.4 33 33 A L E -A 85 0A 17 52,-1.5 52,-1.5 -2,-0.3 2,-0.1 -0.962 25.6-172.7-120.5 121.5 -1.4 -7.9 -6.7 34 34 A D E >> -A 84 0A 43 -2,-0.5 3,-1.7 50,-0.2 4,-1.7 -0.458 48.2 -81.2-103.9 179.5 -4.1 -10.5 -5.8 35 35 A E H 3> S+ 0 0 80 48,-0.5 4,-1.2 1,-0.3 5,-0.1 0.688 127.3 63.1 -55.7 -14.6 -6.0 -11.2 -2.5 36 36 A Q H 3> S+ 0 0 84 2,-0.2 4,-1.3 3,-0.1 -1,-0.3 0.827 103.5 45.4 -82.7 -28.1 -2.9 -13.3 -1.5 37 37 A E H <> S+ 0 0 12 -3,-1.7 4,-1.7 2,-0.2 -2,-0.2 0.893 115.8 45.1 -81.4 -37.3 -0.5 -10.2 -1.5 38 38 A L H X S+ 0 0 25 -4,-1.7 4,-1.8 2,-0.2 5,-0.2 0.872 108.0 59.6 -73.6 -32.0 -3.0 -7.9 0.4 39 39 A E H X S+ 0 0 96 -4,-1.2 4,-1.7 -5,-0.3 3,-0.2 0.959 112.1 38.4 -59.9 -47.9 -3.7 -10.7 2.9 40 40 A A H X S+ 0 0 43 -4,-1.3 4,-1.6 1,-0.2 -1,-0.2 0.817 112.0 58.8 -73.3 -28.9 0.0 -10.8 3.9 41 41 A L H X S+ 0 0 55 -4,-1.7 4,-1.1 2,-0.2 -1,-0.2 0.809 108.4 45.7 -72.2 -25.8 0.4 -7.0 3.6 42 42 A F H X S+ 0 0 25 -4,-1.8 4,-1.3 -3,-0.2 -2,-0.2 0.951 113.6 45.3 -81.5 -51.4 -2.4 -6.5 6.3 43 43 A T H X S+ 0 0 72 -4,-1.7 4,-0.5 -5,-0.2 -2,-0.2 0.863 114.5 51.7 -59.8 -33.3 -1.2 -9.1 8.8 44 44 A K H >X S+ 0 0 96 -4,-1.6 3,-1.4 -5,-0.2 4,-1.2 0.886 97.8 63.2 -73.9 -36.9 2.4 -7.8 8.4 45 45 A E H >< S+ 0 0 78 -4,-1.1 3,-0.6 1,-0.3 5,-0.3 0.910 100.5 55.3 -56.2 -34.5 1.5 -4.2 9.0 46 46 A L H >X S+ 0 0 15 -4,-1.3 4,-1.4 1,-0.2 3,-1.1 0.802 99.4 61.6 -67.6 -24.1 0.4 -5.3 12.5 47 47 A E H << S+ 0 0 111 -3,-1.4 -1,-0.2 -4,-0.5 -2,-0.2 0.838 102.4 50.0 -70.9 -30.0 3.9 -6.8 12.9 48 48 A K T << S+ 0 0 147 -4,-1.2 -1,-0.2 -3,-0.6 -2,-0.2 0.272 131.5 15.1 -91.2 13.8 5.4 -3.3 12.5 49 49 A V T <4 S+ 0 0 116 -3,-1.1 -2,-0.2 -4,-0.0 -3,-0.2 0.381 121.1 47.4-147.5 -58.5 3.1 -1.8 15.2 50 50 A Y S < S- 0 0 93 -4,-1.4 9,-0.0 -5,-0.3 0, 0.0 0.263 72.3-137.1 -72.6-151.3 1.3 -4.4 17.3 51 51 A D - 0 0 118 -3,-0.1 -4,-0.1 0, 0.0 -3,-0.0 -0.231 20.8-174.2-173.4 72.3 3.3 -7.3 18.9 52 52 A P + 0 0 41 0, 0.0 4,-0.1 0, 0.0 2,-0.0 -0.038 16.8 150.2 -65.7 174.3 1.7 -10.8 18.8 53 53 A K S S- 0 0 143 2,-0.3 3,-0.0 0, 0.0 0, 0.0 -0.172 71.8 -38.6-165.8 -90.7 3.2 -13.8 20.5 54 54 A N S S+ 0 0 133 -2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.039 99.4 105.1-147.9 34.1 1.1 -16.7 21.8 55 55 A E - 0 0 99 2,-0.0 2,-0.4 0, 0.0 -2,-0.3 -0.780 53.6-149.6-115.4 161.6 -2.0 -15.0 23.3 56 56 A E S S+ 0 0 105 -2,-0.3 4,-0.0 -4,-0.1 0, 0.0 -0.738 72.5 55.4-133.5 87.5 -5.6 -14.8 21.9 57 57 A D S >> S+ 0 0 78 -2,-0.4 4,-1.1 3,-0.0 3,-0.9 0.020 89.6 56.8-171.3 -67.7 -7.4 -11.5 22.9 58 58 A D H 3> S+ 0 0 88 1,-0.3 4,-0.6 2,-0.2 2,-0.2 0.768 104.3 63.4 -56.9 -20.7 -5.7 -8.2 22.0 59 59 A M H 34 S+ 0 0 54 1,-0.1 -1,-0.3 2,-0.1 -9,-0.0 -0.191 102.9 48.5 -97.2 44.0 -5.8 -9.4 18.4 60 60 A R H X4 S+ 0 0 140 -3,-0.9 3,-1.0 -2,-0.2 4,-0.2 0.436 100.8 51.3-143.2 -55.3 -9.6 -9.6 18.2 61 61 A E H >< S+ 0 0 149 -4,-1.1 3,-1.0 1,-0.3 -2,-0.1 0.923 112.2 50.7 -59.4 -41.1 -11.2 -6.4 19.5 62 62 A M T >< S+ 0 0 25 -4,-0.6 3,-4.5 1,-0.2 4,-0.5 0.681 77.1 105.7 -70.7 -14.2 -9.0 -4.3 17.2 63 63 A E T <> + 0 0 84 -3,-1.0 4,-1.7 1,-0.3 5,-0.3 0.765 62.0 79.4 -37.9 -24.7 -10.0 -6.6 14.3 64 64 A E H <> S+ 0 0 135 -3,-1.0 4,-1.0 -4,-0.2 -1,-0.3 0.797 88.5 55.8 -57.8 -24.1 -12.1 -3.5 13.3 65 65 A E H <> S+ 0 0 84 -3,-4.5 4,-1.7 2,-0.2 5,-0.3 0.937 100.6 54.3 -76.0 -46.1 -8.8 -2.2 11.8 66 66 A R H > S+ 0 0 88 -4,-0.5 4,-2.6 1,-0.3 3,-0.4 0.946 112.1 45.0 -53.7 -47.5 -8.1 -5.1 9.5 67 67 A L H X S+ 0 0 74 -4,-1.7 4,-1.8 1,-0.2 5,-0.4 0.831 104.9 64.2 -67.3 -28.2 -11.5 -4.7 7.9 68 68 A R H X S+ 0 0 153 -4,-1.0 4,-1.5 -5,-0.3 -1,-0.2 0.904 113.0 32.9 -63.2 -37.7 -11.0 -0.9 7.8 69 69 A M H X S+ 0 0 62 -4,-1.7 4,-2.5 -3,-0.4 5,-0.5 0.929 114.7 55.5 -84.7 -49.7 -8.1 -1.5 5.3 70 70 A R H X S+ 0 0 96 -4,-2.6 4,-1.2 -5,-0.3 -2,-0.2 0.852 117.0 40.2 -52.4 -32.2 -9.3 -4.6 3.5 71 71 A E H X S+ 0 0 119 -4,-1.8 4,-2.1 -5,-0.3 5,-0.4 0.941 113.1 49.5 -84.1 -52.3 -12.5 -2.6 2.7 72 72 A H H X S+ 0 0 104 -4,-1.5 4,-3.2 -5,-0.4 5,-0.3 0.919 117.8 42.6 -55.3 -41.8 -11.1 0.9 1.9 73 73 A V H X>S+ 0 0 49 -4,-2.5 4,-2.3 1,-0.2 5,-1.2 0.970 116.3 46.0 -70.5 -50.5 -8.5 -0.7 -0.5 74 74 A M H <5S+ 0 0 57 -4,-1.2 -1,-0.2 -5,-0.5 -2,-0.2 0.740 123.3 38.6 -63.6 -19.9 -11.0 -3.1 -2.1 75 75 A K H <5S+ 0 0 151 -4,-2.1 -2,-0.2 2,-0.1 -1,-0.2 0.810 124.0 34.9 -99.3 -38.6 -13.5 -0.2 -2.4 76 76 A N H <5S+ 0 0 54 -4,-3.2 -3,-0.2 -5,-0.4 -2,-0.2 0.629 130.3 31.0 -93.5 -11.7 -11.2 2.8 -3.4 77 77 A V T <5S+ 0 0 35 -4,-2.3 2,-0.2 -5,-0.3 -3,-0.2 0.722 85.4 103.5-114.6 -33.2 -8.7 0.8 -5.5 78 78 A D < + 0 0 32 -5,-1.2 7,-0.1 1,-0.2 -4,-0.0 -0.278 45.4 174.2 -51.3 109.7 -10.7 -2.1 -7.1 79 79 A T S S+ 0 0 56 -2,-0.2 -1,-0.2 1,-0.1 6,-0.1 0.943 76.5 10.8 -87.8 -61.9 -11.1 -0.6 -10.6 80 80 A N S S- 0 0 92 4,-0.2 -2,-0.1 0, 0.0 -1,-0.1 0.204 101.6-120.9-103.0 18.2 -12.9 -3.4 -12.6 81 81 A Q + 0 0 125 1,-0.1 4,-0.1 -4,-0.1 -3,-0.1 0.944 66.7 136.7 42.6 75.4 -13.6 -5.5 -9.5 82 82 A D S S- 0 0 89 2,-0.4 -1,-0.1 0, 0.0 3,-0.1 0.105 73.3-115.6-131.2 16.4 -11.8 -8.7 -10.5 83 83 A R S S+ 0 0 191 1,-0.1 -48,-0.5 -9,-0.1 2,-0.4 0.487 98.0 89.1 60.8 -3.7 -10.2 -9.3 -7.0 84 84 A L E -A 34 0A 69 -50,-0.2 2,-0.5 -49,-0.1 -2,-0.4 -0.976 67.4-154.0-124.6 134.6 -7.0 -8.7 -9.1 85 85 A V E -A 33 0A 21 -52,-1.5 -52,-1.5 -2,-0.4 2,-0.2 -0.928 8.1-158.1-111.6 125.9 -5.4 -5.2 -9.5 86 86 A T E > -A 32 0A 47 -2,-0.5 4,-1.7 -54,-0.2 5,-0.2 -0.590 28.0-118.1 -96.9 163.4 -3.3 -4.5 -12.6 87 87 A L H > S+ 0 0 61 -56,-0.7 4,-2.5 -2,-0.2 5,-0.2 0.888 111.9 55.7 -66.3 -36.7 -0.7 -1.7 -12.8 88 88 A E H > S+ 0 0 144 2,-0.2 4,-1.5 1,-0.2 -1,-0.1 0.997 114.0 33.7 -60.3 -68.7 -2.7 -0.1 -15.7 89 89 A E H > S+ 0 0 81 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.843 117.0 59.4 -59.7 -30.2 -6.1 0.3 -14.0 90 90 A F H X S+ 0 0 22 -4,-1.7 4,-1.2 1,-0.2 -1,-0.2 0.972 99.8 53.6 -64.8 -50.9 -4.3 0.9 -10.7 91 91 A L H >X S+ 0 0 35 -4,-2.5 4,-4.0 1,-0.2 3,-1.0 0.922 104.7 58.6 -50.0 -43.3 -2.4 4.0 -11.9 92 92 A A H 3X S+ 0 0 38 -4,-1.5 4,-2.2 1,-0.3 -1,-0.2 0.973 98.2 55.2 -51.8 -60.9 -5.8 5.4 -13.1 93 93 A S H 3< S+ 0 0 33 -4,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.805 125.6 27.8 -45.1 -26.3 -7.3 5.3 -9.5 94 94 A T H << S+ 0 0 58 -4,-1.2 -2,-0.2 -3,-1.0 -1,-0.2 0.857 118.9 51.1-100.6 -63.4 -4.2 7.4 -8.6 95 95 A Q H < S+ 0 0 136 -4,-4.0 2,-2.1 -5,-0.2 -3,-0.2 0.907 92.4 81.7 -42.4 -50.8 -3.2 9.3 -11.8 96 96 A R < - 0 0 179 -4,-2.2 -1,-0.2 -5,-0.4 -4,-0.0 -0.316 65.5-174.5 -59.5 85.0 -6.8 10.6 -12.2 97 97 A K + 0 0 175 -2,-2.1 2,-1.9 1,-0.2 -1,-0.2 0.946 68.6 78.3 -48.9 -52.0 -6.3 13.4 -9.6 98 98 A E 0 0 151 -3,-0.2 -1,-0.2 0, 0.0 -2,-0.1 -0.346 360.0 360.0 -60.7 87.0 -10.0 14.3 -9.9 99 99 A F 0 0 204 -2,-1.9 0, 0.0 -5,-0.0 0, 0.0 -0.713 360.0 360.0-171.8 360.0 -11.2 11.4 -7.7