==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 17-MAR-04 1SPK . COMPND 2 MOLECULE: RIKEN CDNA 1300006M19; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR Y.SUZUKI,T.ABE,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN . 72 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5158.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 48.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 29.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 97 0, 0.0 2,-0.4 0, 0.0 69,-0.2 0.000 360.0 360.0 360.0-146.9 4.0 -13.3 13.9 2 2 A S + 0 0 84 67,-0.1 2,-0.3 70,-0.1 3,-0.1 -0.994 360.0 170.3-135.4 127.1 4.3 -15.2 10.6 3 3 A S - 0 0 119 -2,-0.4 0, 0.0 1,-0.3 0, 0.0 -0.765 59.5 -67.8-138.9 89.4 1.8 -17.7 9.3 4 4 A G S S- 0 0 80 -2,-0.3 2,-0.6 1,-0.1 -1,-0.3 -0.284 89.6 -37.5 65.3-150.5 2.5 -18.8 5.7 5 5 A S S S+ 0 0 105 -3,-0.1 2,-0.3 3,-0.0 -1,-0.1 -0.948 86.2 113.7-116.2 114.4 2.0 -16.3 2.9 6 6 A S + 0 0 100 -2,-0.6 -3,-0.1 1,-0.1 29,-0.1 -0.965 60.9 24.4-170.2 160.0 -0.9 -13.8 3.2 7 7 A G S S- 0 0 30 -2,-0.3 28,-0.3 29,-0.3 29,-0.1 0.884 81.7-153.1 41.2 52.5 -1.7 -10.2 3.7 8 8 A Q - 0 0 88 26,-0.2 27,-3.1 1,-0.1 2,-0.4 0.139 8.0-116.0 -45.2 169.8 1.7 -9.2 2.2 9 9 A K E -A 34 0A 78 25,-0.2 57,-2.4 59,-0.1 2,-0.3 -0.917 26.8-168.2-118.4 143.6 3.3 -6.0 3.2 10 10 A V E -AB 33 65A 5 23,-1.8 23,-1.8 -2,-0.4 2,-0.4 -0.920 11.5-142.2-129.5 154.7 4.0 -3.0 1.0 11 11 A K E -AB 32 64A 98 53,-3.8 53,-2.3 -2,-0.3 2,-0.4 -0.971 18.7-127.0-121.4 132.0 6.1 0.1 1.5 12 12 A T - 0 0 1 19,-1.7 18,-1.7 -2,-0.4 51,-0.2 -0.629 19.7-176.3 -79.4 127.9 5.1 3.6 0.2 13 13 A I S S+ 0 0 46 49,-0.5 -1,-0.1 -2,-0.4 50,-0.1 0.529 73.8 36.7 -97.4 -11.3 7.8 5.2 -1.9 14 14 A F S S- 0 0 104 48,-0.7 -1,-0.2 14,-0.1 16,-0.1 -0.993 85.8-109.1-143.7 148.2 5.8 8.3 -2.3 15 15 A P + 0 0 81 0, 0.0 2,-0.2 0, 0.0 13,-0.2 -0.406 34.4 170.0 -75.0 151.3 3.4 10.4 -0.2 16 16 A H B -G 27 0B 42 11,-1.0 11,-0.7 -2,-0.1 2,-0.2 -0.635 11.3-166.3-166.3 99.6 -0.4 10.4 -0.9 17 17 A T - 0 0 98 9,-0.2 9,-0.2 -2,-0.2 8,-0.1 -0.548 16.2-144.5 -89.2 155.6 -2.9 11.9 1.4 18 18 A A - 0 0 22 -2,-0.2 3,-0.3 6,-0.2 -1,-0.1 0.966 21.5-152.6 -80.3 -64.0 -6.7 11.4 1.1 19 19 A G S S- 0 0 55 1,-0.2 2,-2.2 2,-0.2 3,-0.1 0.950 70.4 -35.9 85.2 72.8 -8.0 14.7 2.1 20 20 A N S S+ 0 0 152 1,-0.2 -1,-0.2 4,-0.0 -2,-0.1 -0.331 109.2 120.3 80.5 -55.6 -11.5 14.2 3.6 21 21 A N - 0 0 90 -2,-2.2 3,-0.2 -3,-0.3 -1,-0.2 -0.094 52.4-158.7 -42.3 132.5 -12.1 11.4 1.1 22 22 A K S S+ 0 0 182 1,-0.2 -1,-0.2 -3,-0.1 3,-0.1 0.020 83.5 69.8-105.3 23.8 -12.8 8.2 2.9 23 23 A T S S+ 0 0 71 33,-0.1 34,-1.1 34,-0.1 2,-0.3 0.526 91.0 63.8-112.9 -15.9 -11.8 6.1 -0.2 24 24 A L B S-c 57 0A 43 -3,-0.2 2,-0.4 32,-0.2 -6,-0.2 -0.860 81.4-122.8-113.2 147.6 -8.1 6.9 -0.1 25 25 A L - 0 0 9 32,-1.2 2,-0.6 -2,-0.3 -3,-0.1 -0.760 20.5-142.8 -91.7 131.2 -5.6 5.9 2.6 26 26 A S + 0 0 52 -2,-0.4 2,-0.3 -9,-0.2 -9,-0.2 -0.843 41.3 129.8 -97.9 122.3 -3.6 8.8 4.1 27 27 A F B -G 16 0B 13 -11,-0.7 -11,-1.0 -2,-0.6 2,-0.3 -0.928 48.3-107.2-157.0 177.2 -0.0 8.0 4.9 28 28 A A > - 0 0 52 -2,-0.3 3,-2.4 -13,-0.2 -16,-0.2 -0.856 49.1 -81.2-116.9 152.2 3.5 9.2 4.6 29 29 A Q T 3 S+ 0 0 122 -2,-0.3 -16,-0.2 1,-0.3 3,-0.1 -0.259 119.0 27.4 -52.0 125.9 6.3 7.8 2.4 30 30 A G T 3 S+ 0 0 29 -18,-1.7 -1,-0.3 1,-0.4 -17,-0.1 -0.140 86.7 132.6 111.6 -34.7 7.9 4.9 4.2 31 31 A D < - 0 0 47 -3,-2.4 -19,-1.7 -20,-0.1 2,-0.4 -0.057 53.5-129.0 -47.5 150.9 4.7 3.9 6.1 32 32 A V E -A 11 0A 40 -21,-0.2 18,-1.1 -3,-0.1 2,-0.4 -0.918 20.8-166.5-112.1 134.0 3.9 0.2 5.9 33 33 A L E -AD 10 49A 0 -23,-1.8 -23,-1.8 -2,-0.4 2,-0.5 -0.960 17.6-131.4-122.1 137.8 0.4 -1.0 4.9 34 34 A T E -AD 9 48A 31 14,-2.6 14,-2.6 -2,-0.4 -25,-0.2 -0.776 23.5-132.0 -91.1 123.5 -0.9 -4.6 5.4 35 35 A L E + D 0 47A 15 -27,-3.1 12,-0.3 -2,-0.5 -1,-0.0 -0.386 25.3 177.3 -71.8 150.2 -2.5 -6.0 2.3 36 36 A L + 0 0 76 10,-0.7 -29,-0.3 1,-0.3 -1,-0.1 0.680 65.5 50.5-118.7 -47.9 -5.9 -7.7 2.7 37 37 A I - 0 0 60 9,-0.2 -1,-0.3 2,-0.2 9,-0.3 -0.813 65.9-147.8-100.4 137.6 -6.9 -8.7 -0.8 38 38 A P S S+ 0 0 130 0, 0.0 2,-0.1 0, 0.0 -1,-0.1 0.623 83.3 69.1 -75.0 -13.9 -4.5 -10.7 -3.1 39 39 A E S S- 0 0 144 3,-0.0 7,-0.5 2,-0.0 2,-0.4 -0.395 79.7-125.9 -97.4 176.8 -6.1 -8.9 -6.0 40 40 A E - 0 0 103 5,-0.1 2,-2.6 -2,-0.1 5,-0.3 -0.967 18.9-119.9-128.7 143.9 -5.9 -5.3 -7.1 41 41 A K B > S-E 44 0A 135 3,-2.4 3,-1.1 -2,-0.4 4,-0.1 -0.416 87.7 -56.9 -78.6 64.7 -8.6 -2.8 -7.9 42 42 A D T 3 S- 0 0 158 -2,-2.6 -1,-0.2 1,-0.3 2,-0.1 0.974 121.4 -25.9 59.6 58.4 -7.4 -2.3 -11.4 43 43 A G T 3 S+ 0 0 25 1,-0.4 17,-1.7 16,-0.1 -1,-0.3 -0.277 122.6 102.0 101.3 -44.9 -3.9 -1.3 -10.4 44 44 A W E < -EF 41 59A 96 -3,-1.1 -3,-2.4 15,-0.2 -1,-0.4 -0.395 58.7-154.4 -71.7 150.2 -5.0 0.0 -7.0 45 45 A L E - F 0 58A 29 13,-4.2 13,-2.2 -5,-0.3 2,-0.3 -0.941 3.1-138.4-128.9 150.3 -4.3 -2.2 -4.0 46 46 A Y E + F 0 57A 57 -7,-0.5 -10,-0.7 -2,-0.3 2,-0.3 -0.697 34.0 132.4-106.6 159.6 -6.0 -2.4 -0.6 47 47 A G E -DF 35 56A 0 9,-0.9 9,-0.5 -12,-0.3 2,-0.4 -0.967 48.3 -82.6-179.5-174.9 -4.6 -2.8 2.9 48 48 A E E -DF 34 55A 48 -14,-2.6 -14,-2.6 -2,-0.3 2,-0.3 -0.928 35.4-123.0-117.4 139.5 -4.5 -1.6 6.5 49 49 A H E > -D 33 0A 4 5,-2.1 2,-0.8 -2,-0.4 4,-0.8 -0.617 11.3-139.9 -81.2 135.6 -2.6 1.4 7.8 50 50 A D T 4 S+ 0 0 102 -18,-1.1 -1,-0.1 -2,-0.3 -18,-0.1 -0.241 97.1 31.1 -88.0 45.3 -0.3 0.6 10.7 51 51 A T T 4 S+ 0 0 96 -2,-0.8 -1,-0.1 3,-0.2 -24,-0.1 0.148 120.6 36.8-156.7 -72.4 -1.3 3.8 12.4 52 52 A T T 4 S- 0 0 75 -26,-0.2 -2,-0.1 2,-0.2 3,-0.1 0.741 90.3-137.5 -67.5 -23.7 -4.9 5.0 11.9 53 53 A K < + 0 0 137 -4,-0.8 2,-0.3 1,-0.3 -1,-0.1 0.434 67.0 119.2 78.5 -0.7 -5.9 1.3 11.9 54 54 A A - 0 0 51 -6,-0.1 -5,-2.1 0, 0.0 2,-0.4 -0.661 59.7-134.2 -97.3 153.8 -8.2 2.2 9.0 55 55 A R E + F 0 48A 123 -2,-0.3 2,-0.2 -7,-0.2 -7,-0.2 -0.900 29.0 166.0-111.6 137.6 -7.9 0.7 5.5 56 56 A G E - F 0 47A 3 -9,-0.5 -9,-0.9 -2,-0.4 2,-0.4 -0.644 37.3 -89.6-132.9-170.6 -8.0 2.7 2.3 57 57 A W E +cF 24 46A 69 -34,-1.1 -32,-1.2 -2,-0.2 -11,-0.2 -0.915 42.6 172.4-111.6 135.0 -7.3 2.4 -1.4 58 58 A F E - F 0 45A 0 -13,-2.2 -13,-4.2 -2,-0.4 2,-0.4 -0.983 37.7-100.6-142.4 151.6 -3.9 3.2 -2.8 59 59 A P E > - F 0 44A 16 0, 0.0 3,-2.9 0, 0.0 -15,-0.2 -0.592 23.6-138.5 -75.0 122.4 -2.2 2.8 -6.2 60 60 A S G > S+ 0 0 40 -17,-1.7 3,-1.1 -2,-0.4 -16,-0.1 0.742 106.7 63.9 -49.5 -23.7 0.1 -0.2 -6.3 61 61 A S G 3 S+ 0 0 91 1,-0.3 -1,-0.3 -18,-0.1 -48,-0.1 0.819 97.4 53.2 -70.4 -32.3 2.4 2.2 -8.1 62 62 A Y G < S+ 0 0 88 -3,-2.9 -48,-0.7 -50,-0.1 -49,-0.5 0.253 113.0 54.9 -85.9 11.8 2.6 4.3 -5.0 63 63 A T < - 0 0 8 -3,-1.1 2,-0.3 -51,-0.2 -51,-0.2 -0.985 65.2-159.6-144.8 152.2 3.6 1.2 -3.0 64 64 A K E -B 11 0A 121 -53,-2.3 -53,-3.8 -2,-0.3 2,-0.2 -0.934 32.2 -97.1-132.4 154.8 6.2 -1.5 -3.3 65 65 A L E -B 10 0A 128 -2,-0.3 -55,-0.3 -55,-0.3 -57,-0.0 -0.515 44.1-118.6 -72.6 134.6 6.5 -5.0 -1.9 66 66 A L - 0 0 55 -57,-2.4 2,-0.3 -2,-0.2 -1,-0.1 0.092 19.8-116.7 -60.4-178.7 8.5 -5.2 1.3 67 67 A S S S- 0 0 133 1,-0.3 -1,-0.1 2,-0.1 -57,-0.0 -0.688 77.1 -17.4-128.3 77.5 11.8 -7.2 1.5 68 68 A G S S- 0 0 52 -2,-0.3 -1,-0.3 -59,-0.1 -59,-0.1 -0.189 82.1 -74.1 109.3 158.1 11.2 -10.0 4.0 69 69 A P - 0 0 125 0, 0.0 -2,-0.1 0, 0.0 -67,-0.1 0.010 30.3-138.4 -74.9-173.8 8.7 -10.8 6.8 70 70 A S + 0 0 97 -69,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.501 26.5 173.1-151.5 73.0 8.6 -9.2 10.2 71 71 A S 0 0 86 -2,-0.0 -69,-0.0 1,-0.0 0, 0.0 -0.675 360.0 360.0 -87.3 137.6 7.9 -11.7 13.0 72 72 A G 0 0 116 -2,-0.3 -70,-0.1 0, 0.0 -1,-0.0 -0.745 360.0 360.0-175.2 360.0 8.1 -10.5 16.6