==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING PROTEIN 31-MAR-95 1SSO . COMPND 2 MOLECULE: SSO7D; . SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; . AUTHOR H.BAUMANN,S.KNAPP,T.LUNDBACK,R.LADENSTEIN,T.HARD . 62 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5513.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 53.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 25.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 12.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 94 0, 0.0 15,-1.2 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 163.9 -2.9 0.9 11.5 2 2 A T E -A 15 0A 55 13,-0.2 2,-0.4 14,-0.1 13,-0.2 -0.982 360.0-133.5-143.1 154.8 -0.0 0.1 9.0 3 3 A V E -A 14 0A 1 11,-1.8 11,-1.9 -2,-0.3 2,-0.4 -0.909 16.0-161.1-112.7 137.3 0.3 -2.0 5.9 4 4 A K - 0 0 116 45,-0.5 9,-0.2 -2,-0.4 2,-0.1 -0.932 4.9-157.5-117.7 139.1 3.2 -4.5 5.3 5 5 A F - 0 0 0 -2,-0.4 7,-0.3 7,-0.3 2,-0.2 -0.243 9.1-137.8 -99.1-167.7 4.2 -5.8 1.9 6 6 A K + 0 0 123 5,-0.3 2,-0.6 -2,-0.1 5,-0.2 -0.696 22.6 170.7-157.6 97.9 6.2 -9.0 0.9 7 7 A Y S S- 0 0 99 3,-1.5 -2,-0.0 -2,-0.2 38,-0.0 -0.885 78.1 -30.8-115.8 105.4 8.9 -9.0 -1.7 8 8 A K S S- 0 0 220 -2,-0.6 -1,-0.2 1,-0.2 3,-0.1 0.954 128.9 -41.4 55.9 51.2 11.0 -12.2 -1.9 9 9 A G S S+ 0 0 70 1,-0.2 2,-0.6 -3,-0.1 -1,-0.2 0.801 113.2 125.7 68.7 25.9 10.6 -13.0 1.8 10 10 A E - 0 0 116 2,-0.0 -3,-1.5 0, 0.0 2,-0.5 -0.730 49.5-157.0-118.2 83.6 11.1 -9.2 2.5 11 11 A E - 0 0 138 -2,-0.6 -5,-0.3 -5,-0.2 2,-0.1 -0.425 16.7-161.1 -61.5 111.9 8.1 -8.0 4.6 12 12 A K - 0 0 76 -2,-0.5 2,-0.3 -7,-0.3 -7,-0.3 -0.355 2.8-151.2 -88.6 174.0 8.1 -4.3 4.0 13 13 A Q + 0 0 150 -9,-0.2 2,-0.3 -2,-0.1 -9,-0.2 -0.968 18.3 167.9-151.1 132.8 6.3 -1.7 6.2 14 14 A V E -A 3 0A 16 -11,-1.9 -11,-1.8 -2,-0.3 5,-0.1 -0.964 34.9-119.2-147.1 126.7 4.7 1.7 5.5 15 15 A D E > -A 2 0A 91 -2,-0.3 4,-1.6 -13,-0.2 -13,-0.2 -0.297 25.4-122.1 -62.1 148.0 2.5 3.8 7.8 16 16 A I T 4 S+ 0 0 67 -15,-1.2 -1,-0.1 1,-0.2 -14,-0.1 0.852 115.4 52.3 -61.8 -30.8 -1.0 4.5 6.4 17 17 A S T 4 S+ 0 0 113 1,-0.2 -1,-0.2 16,-0.0 -15,-0.1 0.879 103.7 56.0 -73.2 -36.0 -0.2 8.2 6.7 18 18 A K T 4 S+ 0 0 122 -3,-0.1 16,-1.3 15,-0.1 -1,-0.2 0.867 94.3 85.5 -64.5 -33.4 3.1 7.9 4.8 19 19 A I E < -B 33 0B 10 -4,-1.6 14,-0.2 14,-0.2 3,-0.1 -0.162 58.4-171.4 -62.8 163.8 1.1 6.4 1.9 20 20 A K E + 0 0 137 12,-1.4 2,-0.3 1,-0.5 13,-0.1 0.627 60.2 8.4-122.2 -70.5 -0.4 8.7 -0.7 21 21 A K E -B 32 0B 154 11,-0.6 11,-1.6 2,-0.0 -1,-0.5 -0.813 58.4-168.2-116.4 158.6 -2.7 7.0 -3.2 22 22 A V E +B 31 0B 24 -2,-0.3 2,-0.4 9,-0.2 9,-0.2 -0.943 12.0 164.1-149.3 124.6 -4.0 3.4 -3.3 23 23 A W E -B 30 0B 96 7,-1.7 7,-1.4 -2,-0.3 2,-0.5 -0.959 30.1-135.6-144.5 123.8 -5.8 1.6 -6.2 24 24 A R - 0 0 120 -2,-0.4 2,-0.6 5,-0.2 5,-0.2 -0.648 19.5-156.7 -80.1 124.7 -6.3 -2.2 -6.5 25 25 A V > - 0 0 86 -2,-0.5 2,-1.0 3,-0.4 3,-0.8 -0.888 60.4 -44.2-105.4 118.8 -5.6 -3.3 -10.1 26 26 A G T 3 S- 0 0 64 -2,-0.6 -2,-0.1 1,-0.2 3,-0.0 -0.468 122.6 -29.8 65.5-101.3 -7.3 -6.6 -11.2 27 27 A K T 3 S+ 0 0 176 -2,-1.0 -1,-0.2 2,-0.0 -3,-0.0 0.683 126.1 70.1-118.0 -37.3 -6.6 -8.8 -8.1 28 28 A M S < S- 0 0 92 -3,-0.8 -3,-0.4 18,-0.1 2,-0.4 -0.040 76.5-127.4 -71.7-176.5 -3.4 -7.4 -6.6 29 29 A I E - C 0 45B 4 16,-2.1 16,-0.8 -5,-0.2 2,-0.3 -0.999 23.5-177.9-138.4 138.7 -3.1 -4.0 -5.0 30 30 A S E +BC 23 44B 26 -7,-1.4 -7,-1.7 -2,-0.4 2,-0.3 -0.837 6.9 161.2-130.0 169.3 -0.7 -1.1 -5.6 31 31 A F E -BC 22 43B 0 12,-1.8 12,-1.7 -2,-0.3 2,-0.4 -0.956 35.7-107.8-168.6-176.2 -0.0 2.4 -4.2 32 32 A T E -BC 21 42B 25 -11,-1.6 -12,-1.4 -2,-0.3 -11,-0.6 -0.922 30.7-178.4-134.5 109.9 2.5 5.2 -3.9 33 33 A Y E -BC 19 41B 25 8,-1.6 8,-1.7 -2,-0.4 2,-0.8 -0.863 32.0-117.2-109.5 142.7 4.4 5.8 -0.6 34 34 A D E - C 0 40B 66 -16,-1.3 6,-0.1 -2,-0.4 -2,-0.0 -0.649 22.5-167.1 -79.1 111.6 6.9 8.6 -0.0 35 35 A E - 0 0 145 -2,-0.8 -1,-0.2 4,-0.5 5,-0.1 0.961 46.6-103.4 -63.6 -49.8 10.3 7.0 0.7 36 36 A G S S+ 0 0 70 3,-0.3 4,-0.1 0, 0.0 -2,-0.1 0.627 98.1 74.7 126.8 47.4 11.9 10.2 2.0 37 37 A G S S- 0 0 81 2,-0.2 3,-0.1 0, 0.0 -3,-0.0 0.415 104.8 -83.8-146.6 -51.5 14.2 11.5 -0.8 38 38 A G S S+ 0 0 67 1,-0.4 2,-0.5 0, 0.0 -4,-0.0 0.030 98.6 89.0 161.9 -35.7 12.2 13.0 -3.7 39 39 A K S S- 0 0 189 1,-0.1 -4,-0.5 -5,-0.0 -1,-0.4 -0.748 83.3-113.4 -89.9 128.8 11.2 10.2 -6.0 40 40 A T E -C 34 0B 82 -2,-0.5 2,-1.3 -6,-0.1 -6,-0.2 -0.373 24.5-136.7 -60.2 129.2 7.8 8.6 -5.2 41 41 A G E -C 33 0B 9 -8,-1.7 -8,-1.6 -2,-0.1 -1,-0.1 -0.682 23.3-161.5 -91.7 89.4 8.5 5.0 -4.0 42 42 A R E -C 32 0B 192 -2,-1.3 2,-0.3 -10,-0.2 -10,-0.2 -0.194 9.1-170.7 -63.9 162.4 5.7 3.0 -5.7 43 43 A G E -C 31 0B 10 -12,-1.7 -12,-1.8 2,-0.0 2,-0.5 -0.991 21.8-150.4-156.4 147.5 4.9 -0.5 -4.4 44 44 A A E +C 30 0B 32 -2,-0.3 -14,-0.2 -14,-0.2 2,-0.1 -0.799 23.9 178.4-124.1 91.2 2.8 -3.5 -5.4 45 45 A V E -C 29 0B 2 -16,-0.8 -16,-2.1 -2,-0.5 -40,-0.1 -0.463 28.2-112.8 -87.0 163.6 1.5 -5.4 -2.4 46 46 A S > - 0 0 47 -18,-0.2 4,-0.9 -2,-0.1 -1,-0.1 -0.329 21.7-115.0 -88.1 176.2 -0.8 -8.5 -2.6 47 47 A E T 4 S+ 0 0 108 2,-0.2 -1,-0.1 1,-0.1 -19,-0.1 0.870 116.1 45.4 -80.7 -36.8 -4.4 -8.7 -1.5 48 48 A K T 4 S+ 0 0 202 1,-0.2 -1,-0.1 -3,-0.0 -20,-0.0 0.859 111.8 52.5 -74.3 -33.7 -3.8 -11.3 1.2 49 49 A D T 4 S+ 0 0 43 -43,-0.1 -45,-0.5 -46,-0.0 -1,-0.2 0.831 93.5 88.0 -71.5 -29.9 -0.7 -9.4 2.5 50 50 A A S < S- 0 0 11 -4,-0.9 -47,-0.1 -47,-0.1 4,-0.1 -0.461 84.9-118.4 -69.8 141.9 -2.8 -6.2 2.7 51 51 A P - 0 0 49 0, 0.0 3,-0.4 0, 0.0 4,-0.3 0.176 26.1-104.4 -64.4-168.2 -4.6 -5.7 6.1 52 52 A K S S+ 0 0 200 1,-0.2 4,-0.2 2,-0.1 3,-0.2 0.715 115.4 58.4 -94.8 -24.3 -8.4 -5.5 6.4 53 53 A E S S+ 0 0 138 1,-0.2 -1,-0.2 2,-0.1 4,-0.2 -0.063 88.9 79.2 -95.6 35.8 -8.5 -1.7 6.9 54 54 A L S >> S+ 0 0 8 -3,-0.4 3,-1.3 2,-0.1 4,-0.6 0.789 81.9 56.4-107.9 -43.9 -6.7 -0.9 3.6 55 55 A L H 3> S+ 0 0 79 -4,-0.3 4,-1.3 1,-0.2 3,-0.4 0.762 88.5 87.3 -59.6 -19.5 -9.5 -1.3 1.0 56 56 A Q H >4 S+ 0 0 96 1,-0.3 3,-0.7 -4,-0.2 -1,-0.2 0.902 85.6 49.5 -46.3 -48.9 -11.3 1.4 3.2 57 57 A M H X4 S+ 0 0 81 -3,-1.3 3,-1.6 1,-0.2 -1,-0.3 0.895 104.7 58.5 -62.3 -37.7 -9.6 4.2 1.2 58 58 A L H 3< S+ 0 0 61 -4,-0.6 -1,-0.2 -3,-0.4 -2,-0.2 0.803 117.9 32.9 -63.0 -25.4 -10.6 2.6 -2.1 59 59 A E T << S+ 0 0 171 -4,-1.3 2,-0.8 -3,-0.7 -1,-0.3 -0.058 89.0 120.8-119.8 32.3 -14.2 2.9 -0.9 60 60 A K < + 0 0 142 -3,-1.6 2,-0.5 -5,-0.1 -3,-0.0 -0.825 36.2 175.0-100.3 104.0 -13.9 6.1 1.1 61 61 A Q 0 0 179 -2,-0.8 -2,-0.0 1,-0.2 -3,-0.0 -0.913 360.0 360.0-111.7 133.7 -16.3 8.7 -0.3 62 62 A K 0 0 247 -2,-0.5 -1,-0.2 0, 0.0 0, 0.0 0.944 360.0 360.0 -88.8 360.0 -16.8 12.1 1.3