==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SURFACE ACTIVE PROTEIN 24-MAR-04 1SSZ . COMPND 2 MOLECULE: PULMONARY SURFACTANT-ASSOCIATED PROTEIN B; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.J.WARING,F.J.WALTHER,L.M.GORDON,J.M.HERNANDEZ-JUVIEL, . 34 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3424.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 58.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A a > 0 0 78 0, 0.0 4,-2.2 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -34.0 -11.6 2.9 4.6 2 2 A W H > + 0 0 224 2,-0.2 4,-2.0 1,-0.2 5,-0.1 0.991 360.0 37.1 -62.8 -54.3 -10.0 3.3 8.0 3 3 A L H > S+ 0 0 139 1,-0.2 4,-2.5 2,-0.2 5,-0.3 0.881 113.8 56.9 -64.6 -38.3 -7.8 0.3 7.7 4 4 A b H > S+ 0 0 13 1,-0.3 4,-2.5 2,-0.2 -1,-0.2 0.924 109.8 47.3 -60.9 -39.6 -7.2 0.8 4.0 5 5 A R H X S+ 0 0 142 -4,-2.2 4,-2.7 2,-0.2 -1,-0.3 0.885 107.6 54.7 -67.7 -38.6 -5.9 4.2 5.0 6 6 A A H X S+ 0 0 51 -4,-2.0 4,-1.9 1,-0.2 -2,-0.2 0.955 114.1 40.3 -62.7 -46.2 -3.7 3.0 7.8 7 7 A L H X S+ 0 0 99 -4,-2.5 4,-2.4 1,-0.2 -1,-0.2 0.928 114.7 53.2 -66.3 -42.3 -1.9 0.5 5.5 8 8 A I H X S+ 0 0 13 -4,-2.5 4,-1.5 -5,-0.3 -1,-0.2 0.902 108.1 50.1 -63.2 -40.7 -1.8 3.0 2.7 9 9 A K H X S+ 0 0 131 -4,-2.7 4,-0.7 1,-0.2 3,-0.3 0.944 112.9 44.5 -63.4 -47.3 -0.2 5.7 4.7 10 10 A R H >X S+ 0 0 197 -4,-1.9 3,-0.9 1,-0.2 4,-0.8 0.915 111.4 53.3 -64.4 -41.9 2.6 3.5 6.2 11 11 A I H 3X S+ 0 0 53 -4,-2.4 4,-1.6 1,-0.3 3,-0.3 0.798 91.9 74.5 -64.2 -30.6 3.4 1.9 2.9 12 12 A Q H 3< S+ 0 0 70 -4,-1.5 -1,-0.3 -3,-0.3 -2,-0.2 0.885 97.6 47.7 -53.3 -42.2 3.8 5.3 1.2 13 13 A A H << S+ 0 0 88 -3,-0.9 -1,-0.3 -4,-0.7 -2,-0.2 0.900 106.9 60.0 -64.0 -39.9 7.1 5.7 2.9 14 14 A M H < S+ 0 0 141 -4,-0.8 -2,-0.2 -3,-0.3 -1,-0.2 0.845 103.1 44.5 -64.2 -41.5 8.3 2.2 2.0 15 15 A I < + 0 0 87 -4,-1.6 -1,-0.2 1,-0.2 -4,-0.0 -0.885 43.6 173.4-122.5 115.8 8.2 2.3 -1.8 16 16 A P S S+ 0 0 122 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.740 82.3 64.3 -72.0 -27.9 9.5 5.1 -3.8 17 17 A K S S+ 0 0 198 -3,-0.1 2,-0.3 2,-0.0 -2,-0.1 0.889 98.8 52.2 -69.3 -40.9 8.9 3.1 -6.9 18 18 A G S S- 0 0 35 -6,-0.1 2,-0.4 2,-0.0 -3,-0.1 -0.673 70.9-154.4-100.7 153.3 5.1 2.8 -6.7 19 19 A G - 0 0 64 -2,-0.3 2,-0.4 0, 0.0 -7,-0.0 -0.985 9.4-173.8-132.7 134.0 2.8 5.7 -6.3 20 20 A R - 0 0 138 -2,-0.4 5,-0.0 -12,-0.1 6,-0.0 -0.981 22.4-131.6-122.5 135.3 -0.6 5.9 -4.8 21 21 A M - 0 0 144 -2,-0.4 5,-0.3 1,-0.2 0, 0.0 -0.222 63.6 -35.9 -76.2 173.9 -2.7 9.0 -4.9 22 22 A L >> - 0 0 119 1,-0.1 4,-2.4 3,-0.1 3,-0.7 0.094 64.7-118.6 -44.2 133.7 -4.4 10.2 -1.8 23 23 A P H 3> S+ 0 0 30 0, 0.0 4,-2.2 0, 0.0 5,-0.2 0.677 109.0 53.9 -48.6 -39.2 -5.6 7.5 0.3 24 24 A Q H 3> S+ 0 0 153 1,-0.2 4,-1.7 2,-0.2 5,-0.1 0.954 115.2 44.4 -65.7 -41.6 -9.3 8.1 0.3 25 25 A L H <> S+ 0 0 86 -3,-0.7 4,-2.4 1,-0.2 -1,-0.2 0.911 110.8 53.5 -64.8 -43.8 -9.1 8.1 -3.4 26 26 A V H X S+ 0 0 11 -4,-2.4 4,-2.1 -5,-0.3 5,-0.4 0.919 105.5 53.1 -61.7 -41.0 -6.9 5.1 -3.6 27 27 A b H X>S+ 0 0 1 -4,-2.2 5,-1.4 1,-0.2 4,-1.2 0.925 111.3 46.4 -63.1 -39.2 -9.2 3.0 -1.5 28 28 A R H <5S+ 0 0 156 -4,-1.7 -1,-0.2 3,-0.2 -2,-0.2 0.904 106.7 59.4 -66.8 -37.1 -12.1 3.9 -3.8 29 29 A L H <5S+ 0 0 131 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.952 114.9 33.7 -58.1 -52.0 -10.1 3.2 -6.9 30 30 A V H <5S- 0 0 75 -4,-2.1 -1,-0.3 -5,-0.1 -2,-0.2 0.750 107.3-139.4 -69.7 -22.1 -9.5 -0.4 -5.9 31 31 A L T <5 + 0 0 99 -4,-1.2 -3,-0.2 -5,-0.4 -2,-0.1 0.728 62.3 134.5 68.0 22.7 -12.9 -0.0 -4.4 32 32 A R S