==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 20-APR-04 1T23 . COMPND 2 MOLECULE: CHROMOSOMAL PROTEIN MC1; . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA THERMOPHILA; . AUTHOR F.PAQUET,F.CULARD,F.BARBAULT,J.C.MAURIZOT,G.LANCELOT . 93 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5863.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 59.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 26.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 16 17.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 157 0, 0.0 2,-0.4 0, 0.0 21,-0.0 0.000 360.0 360.0 360.0 156.2 19.8 1.6 -5.3 2 2 A N + 0 0 129 2,-0.0 2,-0.4 21,-0.0 0, 0.0 -0.942 360.0 155.5-131.3 114.0 16.8 0.3 -3.2 3 3 A T - 0 0 87 -2,-0.4 2,-0.5 20,-0.0 19,-0.3 -0.992 19.6-163.9-140.0 131.5 13.8 -1.3 -5.0 4 4 A R E -A 21 0A 26 17,-3.1 17,-3.0 -2,-0.4 2,-0.2 -0.947 10.3-148.8-120.1 122.0 11.3 -3.8 -3.5 5 5 A N E +A 20 0A 54 -2,-0.5 2,-0.3 15,-0.3 15,-0.3 -0.581 18.7 179.4 -85.0 148.0 8.9 -5.9 -5.7 6 6 A F E -A 19 0A 7 13,-2.2 13,-1.3 -2,-0.2 2,-0.4 -0.972 15.9-143.2-144.0 156.3 5.4 -6.9 -4.4 7 7 A V E +A 18 0A 44 41,-0.6 41,-0.4 -2,-0.3 2,-0.3 -0.977 32.2 135.2-129.6 132.2 2.5 -8.9 -5.9 8 8 A L E -A 17 0A 7 9,-2.1 9,-2.1 -2,-0.4 2,-0.4 -0.988 39.3-126.9-162.7 164.9 -1.3 -8.3 -5.5 9 9 A R > - 0 0 170 -2,-0.3 5,-5.0 7,-0.3 7,-0.4 -0.925 20.3-169.4-131.0 114.5 -4.6 -8.2 -7.5 10 10 A D T 5 + 0 0 6 -2,-0.4 3,-0.5 4,-0.3 4,-0.3 0.327 50.0 103.1 -75.1-155.1 -7.1 -5.2 -7.5 11 11 A E T 5S- 0 0 93 30,-3.7 -1,-0.1 1,-0.2 32,-0.1 0.965 123.7 -55.4 69.0 52.3 -10.6 -5.2 -8.9 12 12 A D T 5S+ 0 0 86 1,-0.1 -1,-0.2 2,-0.1 32,-0.2 0.549 129.3 94.4 58.1 8.8 -12.0 -5.6 -5.4 13 13 A G T 5S- 0 0 38 -3,-0.5 31,-0.3 28,-0.3 -3,-0.2 0.888 106.9 -46.0 -90.2 -75.7 -9.9 -8.8 -4.9 14 14 A N S S- 0 0 71 1,-0.2 4,-0.6 -3,-0.1 -1,-0.1 -0.957 70.4-149.9-121.5 136.4 10.4 2.7 -1.2 24 24 A P T 4 S+ 0 0 27 0, 0.0 4,-0.2 0, 0.0 -1,-0.2 0.960 97.5 21.3 -67.3 -52.8 7.9 0.4 0.6 25 25 A R T >> S+ 0 0 70 2,-0.2 4,-1.3 3,-0.1 3,-1.0 0.959 126.5 47.7 -82.3 -57.5 5.9 3.1 2.5 26 26 A Q H 3> S+ 0 0 14 44,-0.3 4,-1.3 1,-0.3 3,-0.2 0.911 117.8 43.3 -52.9 -43.2 6.6 6.2 0.4 27 27 A A H 3X S+ 0 0 13 -4,-0.6 4,-3.1 1,-0.2 -1,-0.3 0.700 101.2 74.5 -77.7 -13.6 5.9 4.4 -2.8 28 28 A A H <> S+ 0 0 5 -3,-1.0 4,-1.5 -4,-0.2 -2,-0.2 0.969 103.5 35.5 -62.1 -51.5 2.8 2.8 -1.1 29 29 A L H X S+ 0 0 0 -4,-1.3 4,-1.3 1,-0.2 -1,-0.2 0.941 121.4 48.3 -69.2 -42.9 0.7 6.0 -1.2 30 30 A K H X S+ 0 0 67 -4,-1.3 4,-0.9 -5,-0.3 -2,-0.2 0.906 107.9 56.4 -61.8 -43.0 2.2 7.0 -4.6 31 31 A A H >X>S+ 0 0 32 -4,-3.1 5,-2.0 1,-0.2 4,-1.5 0.932 104.9 48.4 -59.8 -48.4 1.6 3.5 -6.1 32 32 A A H 3<>S+ 0 0 2 -4,-1.5 5,-0.6 4,-0.3 -1,-0.2 0.892 96.6 74.1 -62.5 -33.2 -2.2 3.3 -5.5 33 33 A N H 3<5S+ 0 0 68 -4,-1.3 -1,-0.2 -5,-0.2 -2,-0.2 0.903 120.4 10.0 -45.0 -45.3 -2.5 6.8 -7.0 34 34 A R H <<5S- 0 0 220 -4,-0.9 -2,-0.2 -3,-0.8 -3,-0.1 0.873 147.1 -8.1 -99.7 -70.8 -2.0 5.2 -10.3 35 35 A G T <5S+ 0 0 21 -4,-1.5 -3,-0.3 1,-0.1 3,-0.2 0.400 107.7 80.6-114.7 2.1 -2.1 1.3 -10.2 36 36 A S T -B 54 0B 53 5,-2.9 5,-0.8 -2,-0.2 2,-0.0 -0.980 18.8-137.9-150.1 132.5 5.3 -12.2 -2.0 50 50 A R T 5S+ 0 0 134 -2,-0.3 2,-2.7 1,-0.1 3,-0.1 -0.260 80.2 40.5 -88.5-178.3 6.5 -15.7 -1.0 51 51 A G T 5S+ 0 0 89 -2,-0.0 2,-0.2 1,-0.0 -1,-0.1 -0.291 119.4 45.1 77.9 -58.6 10.1 -17.1 -1.4 52 52 A T T 5S- 0 0 66 -2,-2.7 2,-1.2 2,-0.1 -3,-0.2 -0.478 107.7 -84.9-105.2-179.2 11.5 -13.7 -0.3 53 53 A K T 5 + 0 0 149 -2,-0.2 39,-3.5 40,-0.1 2,-0.3 -0.718 69.2 140.7 -89.6 99.1 10.5 -11.4 2.6 54 54 A K E < +BC 49 91B 12 -2,-1.2 -5,-2.9 -5,-0.8 2,-0.3 -0.842 8.4 139.5-144.3 106.5 7.7 -9.4 1.1 55 55 A V E +BC 48 90B 18 35,-1.3 35,-2.7 -2,-0.3 2,-0.4 -0.902 12.3 168.5-150.6 118.7 4.6 -8.4 3.1 56 56 A H E -B 47 0B 11 -9,-2.3 -9,-3.0 -2,-0.3 2,-0.7 -0.968 14.9-162.3-131.0 117.6 2.7 -5.1 3.1 57 57 A V E +BC 46 87B 7 30,-0.7 30,-1.1 -2,-0.4 2,-0.3 -0.872 41.3 108.6-106.0 115.9 -0.7 -4.8 4.8 58 58 A F E -BC 45 86B 3 -13,-1.3 -13,-1.4 -2,-0.7 2,-0.4 -0.942 60.5-112.0-162.2-177.2 -2.7 -1.8 3.7 59 59 A K E -BC 44 85B 57 26,-0.7 26,-1.0 -2,-0.3 2,-0.6 -0.996 24.3-157.4-130.0 132.8 -5.7 -0.7 1.6 60 60 A A E + C 0 84B 2 -17,-1.5 -21,-0.4 -2,-0.4 -17,-0.4 -0.881 29.5 137.5-121.6 109.5 -5.3 1.2 -1.7 61 61 A W - 0 0 58 22,-2.2 2,-0.7 -2,-0.6 22,-0.2 -0.683 56.0 -97.3-131.2-173.8 -8.1 3.4 -3.1 62 62 A K S S+ 0 0 89 20,-0.4 2,-0.3 -2,-0.2 18,-0.0 -0.772 78.1 88.0-114.5 91.8 -8.6 6.8 -4.7 63 63 A E E S-D 81 0C 75 18,-2.2 2,-1.2 -2,-0.7 18,-0.5 -0.981 85.4 -70.2-171.0 163.9 -9.8 9.3 -2.0 64 64 A I E +D 80 0C 98 16,-0.3 16,-0.3 -2,-0.3 19,-0.1 -0.453 61.9 156.7 -70.2 93.9 -8.4 11.8 0.6 65 65 A V E -D 79 0C 21 -2,-1.2 14,-1.7 14,-0.8 2,-0.4 -0.180 44.5 -94.2 -97.9-161.1 -6.8 9.7 3.5 66 66 A D - 0 0 83 12,-0.3 12,-0.4 18,-0.2 18,-0.2 -0.915 46.1 -94.4-116.0 140.4 -4.1 10.6 6.0 67 67 A A - 0 0 24 -2,-0.4 2,-1.7 1,-0.1 4,-0.1 -0.412 38.6-148.3 -58.4 100.4 -0.4 9.8 5.4 68 68 A P - 0 0 17 0, 0.0 -1,-0.1 0, 0.0 -39,-0.1 -0.511 60.7 -65.1 -76.4 83.8 -0.1 6.5 7.2 69 69 A K S S+ 0 0 170 -2,-1.7 -43,-0.1 1,-0.1 -44,-0.1 0.838 91.2 144.2 41.3 38.9 3.6 6.7 8.4 70 70 A N - 0 0 1 -45,-0.1 -44,-0.3 -44,-0.1 -1,-0.1 0.702 42.3-155.8 -77.8 -19.2 4.6 6.6 4.7 71 71 A R + 0 0 167 1,-0.2 2,-0.9 -4,-0.1 -45,-0.2 0.873 29.7 162.5 41.8 50.8 7.6 9.1 5.5 72 72 A P - 0 0 10 0, 0.0 3,-0.5 0, 0.0 -1,-0.2 -0.829 28.8-163.8 -99.2 99.7 7.5 10.2 1.8 73 73 A A S S+ 0 0 102 -2,-0.9 -2,-0.1 1,-0.2 -3,-0.0 0.752 91.3 56.3 -56.9 -19.2 9.5 13.6 1.7 74 74 A W S S- 0 0 181 1,-0.2 -1,-0.2 -3,-0.1 -3,-0.0 0.907 131.6 -27.2 -79.4 -42.6 7.9 14.1 -1.7 75 75 A M - 0 0 83 -3,-0.5 -1,-0.2 -5,-0.1 -45,-0.1 -0.723 58.1-145.2-176.2 123.6 4.2 13.8 -0.5 76 76 A P - 0 0 54 0, 0.0 -9,-0.1 0, 0.0 -50,-0.0 -0.208 35.9-104.1 -83.2 176.8 2.5 11.9 2.4 77 77 A E S S+ 0 0 0 1,-0.1 2,-2.1 -11,-0.1 -12,-0.2 0.369 88.4 111.0 -87.9 12.7 -0.9 10.3 2.2 78 78 A K + 0 0 132 -12,-0.4 2,-0.3 -11,-0.1 -12,-0.3 -0.537 69.9 59.8 -82.6 79.9 -2.5 13.2 4.2 79 79 A I E S-D 65 0C 50 -2,-2.1 -14,-0.8 -14,-1.7 2,-0.7 -0.964 104.5 -59.9 177.9 170.5 -4.4 14.6 1.3 80 80 A S E S+D 64 0C 83 -16,-0.3 -16,-0.3 -2,-0.3 -2,-0.1 -0.564 94.5 99.4 -69.1 106.3 -7.1 14.0 -1.4 81 81 A K E S-D 63 0C 30 -2,-0.7 -18,-2.2 -18,-0.5 2,-0.5 -0.809 82.3 -27.8-165.0-155.5 -5.3 11.1 -3.0 82 82 A P - 0 0 0 0, 0.0 -20,-0.4 0, 0.0 -49,-0.2 -0.671 68.9-120.0 -78.2 125.0 -5.3 7.3 -3.1 83 83 A F - 0 0 58 -2,-0.5 -22,-2.2 -22,-0.2 2,-0.3 -0.345 31.3-173.5 -61.4 145.8 -6.6 6.0 0.3 84 84 A V E -C 60 0B 3 -24,-0.2 2,-0.7 -18,-0.2 -24,-0.2 -0.781 7.1-168.3-143.2 94.8 -4.1 3.9 2.1 85 85 A K E -C 59 0B 116 -26,-1.0 -26,-0.7 -2,-0.3 -2,-0.0 -0.760 25.7-134.0 -88.2 117.1 -5.2 2.2 5.3 86 86 A K E +C 58 0B 132 -2,-0.7 2,-0.3 -28,-0.2 -28,-0.2 -0.228 30.8 166.3 -73.0 162.4 -2.2 0.8 7.0 87 87 A E E -C 57 0B 66 -30,-1.1 -30,-0.7 -42,-0.0 -42,-0.0 -0.948 53.1 -57.4-165.5 155.7 -1.6 -2.5 8.6 88 88 A R E - 0 0 175 -2,-0.3 -31,-0.4 -32,-0.1 2,-0.4 -0.083 55.8-162.2 -47.0 132.4 1.6 -4.3 9.8 89 89 A I E + 0 0 28 -33,-0.2 2,-0.4 -43,-0.0 -33,-0.2 -0.942 14.0 179.2-121.7 142.4 4.2 -4.7 7.0 90 90 A E E +C 55 0B 97 -35,-2.7 -35,-1.3 -2,-0.4 2,-0.3 -0.972 13.5 161.0-141.7 123.0 7.3 -7.0 6.8 91 91 A K E -C 54 0B 48 -2,-0.4 -37,-0.3 -37,-0.3 2,-0.3 -0.858 46.0 -74.2-138.5 174.3 9.7 -7.2 3.9 92 92 A L 0 0 63 -39,-3.5 -40,-0.0 -2,-0.3 -37,-0.0 -0.501 360.0 360.0 -70.9 131.3 13.2 -8.3 2.9 93 93 A E 0 0 213 -2,-0.3 -40,-0.1 0, 0.0 -1,-0.0 -0.736 360.0 360.0-101.4 360.0 15.9 -6.1 4.3