==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 30-APR-04 1T4N . COMPND 2 MOLECULE: RIBONUCLEASE III; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR N.LEULLIOT,S.QUEVILLON-CHERUEL,M.GRAILLE,H.VAN TILBEURGH, . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6212.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 65.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 14.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 35.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 363 A M 0 0 194 0, 0.0 3,-0.5 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0-175.9 -9.7 -7.5 11.4 2 364 A D + 0 0 76 1,-0.2 57,-0.1 3,-0.1 58,-0.1 -0.588 360.0 97.8 -75.7 125.2 -6.7 -8.4 9.2 3 365 A K S S+ 0 0 147 -2,-0.4 59,-0.2 56,-0.2 -1,-0.2 0.188 84.5 37.5-171.2 -41.9 -7.6 -8.6 5.5 4 366 A L S S- 0 0 108 -3,-0.5 5,-0.2 58,-0.1 55,-0.1 -0.248 115.6 -94.2-120.5 42.5 -6.7 -5.3 3.8 5 367 A D > - 0 0 4 54,-0.2 4,-3.8 3,-0.1 5,-0.4 0.937 51.5-173.0 43.0 67.2 -3.5 -4.6 5.7 6 368 A M H > S+ 0 0 67 2,-0.2 4,-3.5 1,-0.2 5,-0.3 0.973 80.0 34.8 -50.3 -71.4 -5.1 -2.4 8.3 7 369 A N H > S+ 0 0 78 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.920 121.9 48.4 -51.7 -50.6 -2.0 -1.1 10.0 8 370 A A H > S+ 0 0 2 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.933 116.7 41.8 -57.4 -49.2 0.0 -1.1 6.8 9 371 A K H X S+ 0 0 81 -4,-3.8 4,-2.3 1,-0.2 -1,-0.2 0.864 115.5 51.0 -67.0 -36.3 -2.7 0.8 4.9 10 372 A R H X S+ 0 0 168 -4,-3.5 4,-1.6 -5,-0.4 -2,-0.2 0.840 107.7 54.4 -69.5 -32.8 -3.3 3.0 7.9 11 373 A Q H X S+ 0 0 88 -4,-2.7 4,-0.7 -5,-0.3 5,-0.2 0.946 111.1 43.3 -65.3 -49.7 0.4 3.8 8.1 12 374 A L H >X>S+ 0 0 0 -4,-2.1 4,-3.1 1,-0.2 5,-2.5 0.917 118.3 44.5 -62.4 -45.3 0.5 4.9 4.4 13 375 A Y H 3<5S+ 0 0 110 -4,-2.3 -1,-0.2 3,-0.2 -2,-0.2 0.751 116.3 48.0 -71.5 -23.8 -2.7 6.9 4.8 14 376 A S H 3<5S+ 0 0 71 -4,-1.6 -1,-0.2 -5,-0.2 -2,-0.2 0.496 123.2 32.7 -93.2 -6.2 -1.4 8.3 8.1 15 377 A L H <<5S- 0 0 55 -4,-0.7 69,-0.4 -3,-0.6 68,-0.4 0.605 143.4 -1.1-120.5 -24.9 2.0 9.2 6.7 16 378 A I T <5S+ 0 0 0 -4,-3.1 2,-1.2 -5,-0.2 3,-0.3 0.555 100.0 97.1-137.2 -34.1 1.3 10.1 3.0 17 379 A G < + 0 0 2 -5,-2.5 -1,-0.1 1,-0.2 5,-0.1 -0.492 36.7 145.2 -68.2 96.5 -2.4 9.7 2.3 18 380 A Y S S- 0 0 70 -2,-1.2 -1,-0.2 -3,-0.1 4,-0.1 0.799 72.6 -78.0 -99.9 -39.9 -3.7 13.3 2.8 19 381 A A S S+ 0 0 62 -3,-0.3 26,-0.1 0, 0.0 -2,-0.1 -0.189 120.8 60.5 175.3 -69.1 -6.4 13.4 0.1 20 382 A S S S+ 0 0 98 1,-0.2 2,-1.5 2,-0.1 26,-0.2 0.800 96.9 72.7 -53.0 -29.8 -5.3 13.9 -3.5 21 383 A L S S- 0 0 5 -5,-0.2 2,-2.3 24,-0.2 -1,-0.2 -0.617 75.6-163.1 -90.1 78.6 -3.4 10.6 -3.0 22 384 A R - 0 0 170 -2,-1.5 2,-0.3 1,-0.1 21,-0.1 -0.384 15.8-145.9 -64.0 80.8 -6.3 8.2 -3.0 23 385 A L + 0 0 13 -2,-2.3 2,-0.3 21,-0.1 21,-0.2 -0.319 34.7 159.7 -54.0 110.4 -4.4 5.3 -1.5 24 386 A H E -A 43 0A 111 19,-2.1 19,-2.6 -2,-0.3 2,-0.5 -0.967 32.9-140.2-137.5 152.8 -5.9 2.2 -3.1 25 387 A Y E -A 42 0A 31 -2,-0.3 2,-0.6 17,-0.3 17,-0.2 -0.957 10.5-167.3-118.9 128.9 -4.8 -1.4 -3.7 26 388 A V E -A 41 0A 53 15,-1.6 15,-1.4 -2,-0.5 2,-0.3 -0.933 10.0-153.6-118.3 110.0 -5.4 -3.3 -6.9 27 389 A T E +A 40 0A 59 -2,-0.6 13,-0.2 13,-0.2 31,-0.0 -0.636 20.4 170.3 -83.3 135.4 -4.8 -7.1 -6.7 28 390 A V + 0 0 83 11,-2.1 12,-0.1 -2,-0.3 -1,-0.1 0.361 50.0 100.1-122.1 -1.8 -3.9 -8.8 -10.0 29 391 A K + 0 0 31 10,-1.1 9,-0.1 6,-0.0 6,-0.1 0.965 44.3 176.5 -48.3 -80.7 -3.0 -12.3 -8.7 30 392 A K - 0 0 161 1,-0.1 5,-0.3 9,-0.1 4,-0.2 0.990 35.8-128.2 66.3 61.7 -6.1 -14.3 -9.4 31 393 A P + 0 0 74 0, 0.0 -1,-0.1 0, 0.0 7,-0.0 -0.097 66.1 106.6 -43.5 127.2 -4.6 -17.7 -8.1 32 394 A T S S- 0 0 125 3,-0.9 -2,-0.1 -3,-0.1 -3,-0.0 -0.050 89.8 -44.3-162.9 -84.7 -5.1 -20.4 -10.7 33 395 A A S S+ 0 0 93 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.544 133.1 37.9-134.4 -48.4 -2.2 -21.8 -12.8 34 396 A V S S+ 0 0 141 -4,-0.2 -4,-0.1 -5,-0.1 -5,-0.0 0.807 104.0 78.4 -79.1 -31.4 -0.1 -18.9 -14.0 35 397 A D - 0 0 33 -5,-0.3 -3,-0.9 1,-0.2 -1,-0.1 -0.707 55.7-179.8 -83.3 114.7 -0.5 -17.0 -10.8 36 398 A P - 0 0 101 0, 0.0 2,-0.2 0, 0.0 -1,-0.2 0.658 64.8 -8.1 -88.2 -18.5 1.8 -18.5 -8.1 37 399 A N S S- 0 0 80 -8,-0.0 2,-0.8 2,-0.0 19,-0.2 -0.848 88.1 -65.5-156.7-167.7 0.8 -16.1 -5.3 38 400 A S E - B 0 55A 2 17,-4.0 17,-0.7 -2,-0.2 2,-0.5 -0.831 48.7-175.9 -99.9 101.5 -1.1 -13.0 -4.2 39 401 A I E + B 0 54A 44 -2,-0.8 -11,-2.1 15,-0.3 -10,-1.1 -0.864 3.2 179.0-102.6 126.8 0.4 -10.0 -5.9 40 402 A V E -AB 27 53A 1 13,-2.1 13,-2.0 -2,-0.5 2,-0.4 -0.915 15.8-156.3-125.9 152.3 -1.0 -6.5 -5.1 41 403 A E E -AB 26 52A 51 -15,-1.4 -15,-1.6 -2,-0.3 2,-0.6 -0.917 14.5-140.9-133.6 108.4 -0.0 -3.0 -6.3 42 404 A C E -AB 25 51A 1 9,-3.9 8,-1.9 -2,-0.4 9,-1.4 -0.535 26.6-170.8 -68.9 113.2 -0.8 0.1 -4.2 43 405 A R E -AB 24 49A 109 -19,-2.6 -19,-2.1 -2,-0.6 6,-0.2 -0.880 13.1-134.5-111.1 140.4 -1.9 2.8 -6.7 44 406 A V - 0 0 15 4,-1.5 -21,-0.1 -2,-0.4 -23,-0.1 -0.279 34.1 -95.6 -83.7 173.0 -2.5 6.4 -5.8 45 407 A G S S+ 0 0 37 1,-0.1 -24,-0.2 2,-0.1 -1,-0.1 0.895 121.8 48.5 -55.2 -43.6 -5.4 8.6 -6.9 46 408 A D S S- 0 0 149 -26,-0.2 -1,-0.1 2,-0.1 -25,-0.1 0.997 123.8 -87.3 -60.4 -75.7 -3.4 10.0 -9.8 47 409 A G S S+ 0 0 61 1,-0.1 2,-0.4 0, 0.0 -2,-0.1 0.268 82.3 112.4 161.4 51.9 -2.0 6.8 -11.4 48 410 A T - 0 0 90 -4,-0.1 -4,-1.5 0, 0.0 2,-0.5 -0.962 59.8-126.3-144.7 123.1 1.3 5.6 -10.0 49 411 A V E +B 43 0A 54 -2,-0.4 -6,-0.3 -6,-0.2 3,-0.2 -0.549 27.8 174.7 -70.8 115.4 2.0 2.5 -7.9 50 412 A L E S+ 0 0 17 -8,-1.9 2,-0.4 -2,-0.5 22,-0.2 0.671 70.7 33.2 -93.7 -21.8 3.7 3.6 -4.7 51 413 A G E +B 42 0A 1 -9,-1.4 -9,-3.9 18,-0.1 2,-0.5 -0.903 62.3 176.4-143.3 113.5 3.8 0.2 -3.1 52 414 A T E +B 41 0A 58 -2,-0.4 2,-0.3 -11,-0.2 -11,-0.2 -0.961 18.4 144.9-118.4 123.4 4.1 -3.2 -4.9 53 415 A G E -B 40 0A 7 -13,-2.0 -13,-2.1 -2,-0.5 12,-0.4 -0.986 32.8-136.8-157.9 146.0 4.4 -6.4 -2.9 54 416 A V E +B 39 0A 48 -2,-0.3 2,-0.3 -15,-0.2 -15,-0.3 -0.284 26.4 159.9 -93.3-178.7 3.3 -10.1 -3.2 55 417 A G E -B 38 0A 7 -17,-0.7 -17,-4.0 -2,-0.1 3,-0.1 -0.979 52.1 -89.4-179.9-177.6 1.8 -12.4 -0.6 56 418 A R S S- 0 0 197 -2,-0.3 2,-0.2 -19,-0.2 -17,-0.1 0.806 103.6 -6.2 -82.8 -32.3 -0.1 -15.6 0.1 57 419 A N S > S- 0 0 90 -19,-0.2 4,-2.7 -3,-0.1 5,-0.4 -0.837 88.3 -78.1-148.1-176.0 -3.5 -13.8 0.1 58 420 A I H > S+ 0 0 80 -2,-0.2 4,-1.2 1,-0.2 -55,-0.1 0.810 128.5 52.0 -60.6 -29.9 -5.1 -10.4 -0.1 59 421 A K H > S+ 0 0 86 2,-0.2 4,-1.6 3,-0.2 -1,-0.2 0.950 116.6 35.8 -71.7 -51.4 -4.2 -9.9 3.5 60 422 A I H >> S+ 0 0 48 2,-0.2 4,-2.5 1,-0.2 3,-0.6 0.981 118.9 48.2 -65.9 -59.4 -0.6 -10.8 3.2 61 423 A A H 3X S+ 0 0 0 -4,-2.7 4,-2.9 1,-0.3 -21,-0.2 0.867 110.4 54.7 -49.8 -40.3 0.0 -9.2 -0.2 62 424 A G H 3X S+ 0 0 2 -4,-1.2 4,-2.0 -5,-0.4 -1,-0.3 0.900 109.8 45.0 -61.9 -41.6 -1.7 -6.1 1.0 63 425 A I H S+ 0 0 155 -2,-2.2 4,-1.6 1,-0.2 -1,-0.2 0.828 79.9 50.1 -58.4 -32.8 12.1 6.6 3.3 74 436 A K H > S+ 0 0 177 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.942 114.5 41.0 -71.4 -48.9 12.7 9.2 0.6 75 437 A M H > S+ 0 0 80 1,-0.2 4,-1.2 2,-0.2 -2,-0.2 0.797 116.6 51.6 -68.9 -28.8 9.3 8.9 -1.0 76 438 A L H X S+ 0 0 15 -4,-2.8 4,-3.0 2,-0.2 -1,-0.2 0.816 107.7 52.0 -77.1 -31.6 7.8 8.7 2.5 77 439 A D H X S+ 0 0 98 -4,-1.6 4,-1.7 -5,-0.2 -2,-0.2 0.876 105.8 54.2 -71.5 -38.7 9.6 11.8 3.7 78 440 A F H < S+ 0 0 152 -4,-1.8 -1,-0.2 2,-0.2 -2,-0.2 0.902 119.5 33.3 -62.0 -41.9 8.3 13.8 0.7 79 441 A Y H >X S+ 0 0 48 -4,-1.2 4,-4.3 2,-0.2 3,-2.6 0.885 113.1 59.6 -80.8 -42.1 4.7 12.9 1.5 80 442 A A H 3X S+ 0 0 23 -4,-3.0 4,-0.9 1,-0.3 5,-0.2 0.807 104.9 52.3 -56.2 -28.7 5.2 12.8 5.3 81 443 A K H 3< S+ 0 0 146 -4,-1.7 -1,-0.3 3,-0.2 -2,-0.2 0.499 119.9 35.0 -85.2 -4.3 6.3 16.5 5.0 82 444 A Q H <> S+ 0 0 98 -3,-2.6 4,-2.2 -67,-0.3 -2,-0.2 0.737 121.1 42.0-112.8 -47.9 3.0 17.1 3.1 83 445 A R H X S+ 0 0 42 -4,-4.3 4,-1.3 -68,-0.4 5,-0.3 0.931 124.7 37.7 -67.3 -46.4 0.5 14.9 4.7 84 446 A A H X S+ 0 0 44 -4,-0.9 4,-1.1 -5,-0.5 -1,-0.2 0.768 122.2 46.0 -75.4 -26.9 1.7 15.6 8.2 85 447 A A H 4 S+ 0 0 69 -6,-0.3 -2,-0.2 -5,-0.2 -1,-0.2 0.724 108.0 56.7 -86.6 -24.9 2.3 19.2 7.3 86 448 A A H < S+ 0 0 74 -4,-2.2 -2,-0.2 1,-0.1 -3,-0.2 0.861 123.9 21.9 -74.2 -37.0 -1.0 19.6 5.6 87 449 A L H < 0 0 121 -4,-1.3 -2,-0.2 -5,-0.2 -3,-0.2 0.895 360.0 360.0 -94.3 -58.4 -3.0 18.6 8.7 88 450 A G < 0 0 96 -4,-1.1 -4,-0.1 -5,-0.3 -5,-0.0 -0.172 360.0 360.0 172.3 360.0 -0.6 19.2 11.6