==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-JAN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 26-JUL-11 3T4R . COMPND 2 MOLECULE: PHOSPHOPROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: LETTUCE NECROTIC YELLOWS VIRUS; . AUTHOR N.MARTINEZ,N.TARBOURIECH,M.JAMIN . 72 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5021.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 73.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 44 61.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A R > 0 0 200 0, 0.0 4,-3.1 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -39.0 5.1 15.3 32.3 2 4 A I H > + 0 0 93 2,-0.2 4,-1.7 1,-0.2 5,-0.1 0.920 360.0 38.1 -57.7 -55.0 8.5 14.9 34.1 3 5 A R H > S+ 0 0 69 1,-0.2 4,-2.6 2,-0.2 5,-0.3 0.935 115.7 55.2 -56.4 -50.7 8.2 18.2 36.1 4 6 A H H > S+ 0 0 90 1,-0.2 4,-2.0 2,-0.2 -2,-0.2 0.915 108.8 48.1 -44.8 -49.5 4.5 17.4 36.6 5 7 A E H X S+ 0 0 57 -4,-3.1 4,-1.7 1,-0.2 -1,-0.2 0.820 109.0 52.9 -73.4 -27.1 5.5 14.0 38.0 6 8 A K H X S+ 0 0 3 -4,-1.7 4,-2.6 -5,-0.2 -1,-0.2 0.904 109.8 48.1 -65.1 -44.0 8.1 15.6 40.3 7 9 A E H X S+ 0 0 80 -4,-2.6 4,-1.9 2,-0.2 -2,-0.2 0.886 111.6 51.1 -62.1 -38.3 5.4 18.1 41.7 8 10 A K H X S+ 0 0 89 -4,-2.0 4,-2.0 -5,-0.3 -1,-0.2 0.872 108.7 51.9 -69.9 -37.1 3.1 15.1 42.2 9 11 A L H X S+ 0 0 5 -4,-1.7 4,-1.6 2,-0.2 -2,-0.2 0.923 106.0 52.7 -64.1 -47.9 5.8 13.3 44.1 10 12 A L H <>S+ 0 0 0 -4,-2.6 5,-2.3 1,-0.2 -2,-0.2 0.896 112.8 45.8 -54.0 -43.5 6.4 16.2 46.4 11 13 A A H ><5S+ 0 0 30 -4,-1.9 3,-1.5 1,-0.2 -1,-0.2 0.875 110.0 53.2 -62.0 -39.3 2.6 16.1 47.1 12 14 A D H 3<5S+ 0 0 86 -4,-2.0 -2,-0.2 1,-0.3 -1,-0.2 0.693 106.4 54.8 -71.2 -22.7 2.6 12.3 47.6 13 15 A L T 3<5S- 0 0 2 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.279 125.6-103.6 -95.3 11.4 5.4 12.8 50.1 14 16 A D T < 5 + 0 0 107 -3,-1.5 -3,-0.2 1,-0.3 -2,-0.1 0.521 67.8 148.8 83.4 14.7 3.2 15.3 52.1 15 17 A W < - 0 0 35 -5,-2.3 -1,-0.3 -6,-0.2 2,-0.2 -0.479 59.8-101.4 -67.2 147.0 4.7 18.6 51.1 16 18 A E > - 0 0 138 1,-0.2 4,-2.2 -2,-0.1 3,-0.3 -0.515 18.9-133.5 -78.6 144.9 1.8 21.1 51.2 17 19 A I H > S+ 0 0 114 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.863 105.7 62.8 -60.2 -39.1 0.4 21.9 47.7 18 20 A G H 4 S+ 0 0 48 1,-0.2 4,-0.3 2,-0.2 -1,-0.2 0.876 108.6 38.9 -54.0 -45.1 0.6 25.6 48.8 19 21 A E H >> S+ 0 0 85 -3,-0.3 3,-1.1 2,-0.2 4,-0.6 0.865 111.7 56.1 -77.6 -36.9 4.3 25.5 49.1 20 22 A I H >< S+ 0 0 10 -4,-2.2 3,-1.1 1,-0.2 -2,-0.2 0.866 101.2 60.9 -54.1 -39.6 5.0 23.3 46.0 21 23 A A T 3< S+ 0 0 81 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.708 102.1 52.3 -67.4 -15.5 3.1 25.8 44.0 22 24 A Q T <4 S+ 0 0 148 -3,-1.1 -1,-0.3 -4,-0.3 -2,-0.2 0.577 84.3 104.1 -99.5 -8.5 5.6 28.4 44.9 23 25 A Y S << S- 0 0 38 -3,-1.1 -3,-0.0 -4,-0.6 3,-0.0 -0.449 71.7-129.2 -60.9 141.0 8.7 26.4 43.8 24 26 A T > - 0 0 73 -2,-0.1 4,-2.5 1,-0.1 3,-0.2 -0.555 27.0-105.8 -84.2 160.7 10.2 27.6 40.5 25 27 A P H > S+ 0 0 73 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.895 123.5 52.0 -51.8 -39.1 10.8 24.8 37.9 26 28 A L H > S+ 0 0 133 2,-0.2 4,-1.8 1,-0.2 5,-0.1 0.876 109.6 49.1 -66.5 -36.5 14.6 25.0 38.6 27 29 A I H > S+ 0 0 48 -3,-0.2 4,-2.8 2,-0.2 5,-0.3 0.931 109.2 51.5 -69.7 -46.0 13.9 24.6 42.3 28 30 A V H X S+ 0 0 0 -4,-2.5 4,-2.8 1,-0.2 -2,-0.2 0.954 110.9 49.6 -49.4 -50.8 11.7 21.6 41.7 29 31 A D H < S+ 0 0 54 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.879 113.0 47.2 -57.8 -36.5 14.5 20.1 39.5 30 32 A F H < S+ 0 0 73 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.884 115.3 43.3 -74.7 -39.3 17.0 20.8 42.3 31 33 A L H < S+ 0 0 2 -4,-2.8 28,-0.2 1,-0.3 -2,-0.2 0.867 125.7 32.3 -73.3 -38.1 14.9 19.3 45.1 32 34 A V S < S- 0 0 0 -4,-2.8 -1,-0.3 -5,-0.3 -2,-0.1 -0.777 78.4-171.9-122.2 76.5 13.8 16.2 43.1 33 35 A P >> - 0 0 35 0, 0.0 4,-1.8 0, 0.0 3,-1.2 -0.315 42.8 -99.1 -60.4 164.8 16.6 15.3 40.7 34 36 A D H 3> S+ 0 0 101 1,-0.3 4,-1.8 2,-0.2 5,-0.1 0.742 123.4 59.5 -61.9 -29.7 15.6 12.5 38.2 35 37 A D H 3> S+ 0 0 101 2,-0.2 4,-0.7 1,-0.2 -1,-0.3 0.801 107.0 47.8 -65.5 -32.5 17.3 9.8 40.4 36 38 A I H <> S+ 0 0 2 -3,-1.2 4,-0.6 2,-0.2 3,-0.5 0.916 110.4 49.3 -77.4 -42.2 14.9 10.7 43.2 37 39 A L H >< S+ 0 0 42 -4,-1.8 3,-1.5 1,-0.2 -2,-0.2 0.895 106.6 58.1 -55.1 -43.1 11.9 10.7 41.0 38 40 A A H >< S+ 0 0 59 -4,-1.8 3,-1.6 1,-0.3 4,-0.4 0.786 93.6 67.2 -64.6 -27.3 13.0 7.2 39.7 39 41 A X H 3< S+ 0 0 55 -4,-0.7 -1,-0.3 -3,-0.5 3,-0.2 0.817 102.8 46.1 -59.7 -31.7 12.9 5.9 43.3 40 42 A A T X< S+ 0 0 17 -3,-1.5 3,-1.7 -4,-0.6 -1,-0.3 0.396 85.1 104.4 -91.1 -2.0 9.2 6.3 43.3 41 43 A A T < S+ 0 0 74 -3,-1.6 -1,-0.2 1,-0.3 -2,-0.1 0.914 81.8 39.9 -54.1 -61.3 8.7 4.7 39.9 42 44 A D T 3 S- 0 0 178 -4,-0.4 -1,-0.3 1,-0.3 -2,-0.1 0.182 129.7 -93.4 -79.6 18.8 7.4 1.2 40.8 43 45 A G < - 0 0 31 -3,-1.7 -1,-0.3 2,-0.1 2,-0.2 -0.095 51.8 -67.7 102.8 165.8 5.4 3.1 43.4 44 46 A L + 0 0 59 -3,-0.1 -4,-0.0 1,-0.1 3,-0.0 -0.391 60.2 29.1 -92.4-175.5 5.5 4.1 47.0 45 47 A T >> + 0 0 38 -2,-0.2 4,-3.2 -32,-0.0 3,-1.2 -0.981 38.6 127.1-144.7 -9.0 5.5 4.0 49.8 46 48 A P T 34 S- 0 0 109 0, 0.0 -2,-0.1 0, 0.0 4,-0.0 0.096 113.4 -56.3 20.9-114.6 6.7 1.3 52.1 47 49 A E T 3> S+ 0 0 88 2,-0.1 4,-1.4 -3,-0.0 -3,-0.0 -0.293 122.9 108.9-129.5 37.9 8.9 3.7 54.0 48 50 A L H <> S+ 0 0 41 -3,-1.2 4,-3.0 2,-0.2 5,-0.3 0.759 74.9 64.8 -61.6 -37.3 10.4 4.3 50.7 49 51 A K H X S+ 0 0 51 -4,-3.2 4,-2.6 1,-0.2 5,-0.2 0.951 101.5 42.2 -52.1 -55.1 8.4 7.4 51.6 50 52 A E H > S+ 0 0 110 -5,-0.4 4,-2.1 2,-0.2 -1,-0.2 0.887 113.5 55.0 -65.5 -36.4 10.6 8.3 54.5 51 53 A K H X S+ 0 0 104 -4,-1.4 4,-1.7 2,-0.2 -2,-0.2 0.958 112.9 39.9 -56.3 -55.6 13.7 7.4 52.4 52 54 A I H X S+ 0 0 0 -4,-3.0 4,-2.4 2,-0.2 5,-0.2 0.865 111.9 55.8 -64.4 -43.5 12.8 9.8 49.6 53 55 A Q H X S+ 0 0 40 -4,-2.6 4,-2.5 -5,-0.3 -1,-0.2 0.902 107.6 51.6 -54.3 -45.8 11.6 12.5 51.9 54 56 A N H X S+ 0 0 91 -4,-2.1 4,-2.2 -5,-0.2 -1,-0.2 0.889 109.5 49.2 -57.2 -44.4 15.0 12.4 53.6 55 57 A E H X S+ 0 0 64 -4,-1.7 4,-1.3 2,-0.2 -2,-0.2 0.905 112.5 46.8 -63.0 -43.0 16.7 12.7 50.3 56 58 A I H X S+ 0 0 0 -4,-2.4 4,-2.5 2,-0.2 -2,-0.2 0.889 109.9 53.3 -68.9 -42.7 14.6 15.8 49.3 57 59 A I H X S+ 0 0 77 -4,-2.5 4,-2.4 2,-0.2 -2,-0.2 0.926 106.1 55.2 -56.5 -40.5 15.1 17.4 52.7 58 60 A E H X S+ 0 0 116 -4,-2.2 4,-2.2 1,-0.2 -1,-0.2 0.900 110.1 45.1 -58.9 -39.0 18.8 17.0 52.2 59 61 A N H X S+ 0 0 36 -4,-1.3 4,-1.7 -28,-0.2 -1,-0.2 0.834 111.9 51.1 -76.1 -36.4 18.5 18.9 48.9 60 62 A H H X S+ 0 0 56 -4,-2.5 4,-2.4 2,-0.2 -1,-0.2 0.855 108.0 53.3 -68.8 -32.8 16.4 21.5 50.4 61 63 A I H X S+ 0 0 73 -4,-2.4 4,-2.6 2,-0.2 -2,-0.2 0.939 108.1 51.0 -63.4 -49.9 19.0 21.9 53.2 62 64 A A H X S+ 0 0 41 -4,-2.2 4,-1.6 1,-0.2 -2,-0.2 0.893 111.7 47.6 -49.6 -47.1 21.6 22.4 50.5 63 65 A L H X S+ 0 0 26 -4,-1.7 4,-1.8 1,-0.2 -2,-0.2 0.916 112.2 48.2 -67.2 -48.9 19.5 25.1 48.8 64 66 A X H X S+ 0 0 89 -4,-2.4 4,-2.4 1,-0.2 -1,-0.2 0.883 108.7 53.6 -56.5 -46.6 18.7 26.9 52.0 65 67 A A H X S+ 0 0 56 -4,-2.6 4,-2.6 1,-0.2 -1,-0.2 0.887 108.2 50.8 -57.9 -41.8 22.3 27.0 53.1 66 68 A L H X S+ 0 0 104 -4,-1.6 4,-1.6 2,-0.2 -1,-0.2 0.837 107.8 51.9 -66.1 -39.4 23.3 28.5 49.7 67 69 A E H X S+ 0 0 110 -4,-1.8 4,-1.1 2,-0.2 -2,-0.2 0.955 112.3 48.4 -60.0 -46.1 20.7 31.2 50.1 68 70 A E H X S+ 0 0 138 -4,-2.4 4,-1.8 1,-0.2 -2,-0.2 0.866 110.5 47.2 -65.1 -45.8 22.1 32.0 53.6 69 71 A Y H < S+ 0 0 185 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.915 107.0 58.9 -58.0 -47.7 25.9 32.2 52.7 70 72 A S H < S+ 0 0 106 -4,-1.6 -2,-0.2 1,-0.2 -1,-0.2 0.838 112.8 38.6 -46.0 -43.8 25.1 34.5 49.7 71 73 A S H < 0 0 104 -4,-1.1 -1,-0.2 -5,-0.1 -2,-0.2 0.936 360.0 360.0 -76.2 -49.4 23.5 37.1 51.9 72 74 A L < 0 0 150 -4,-1.8 -3,-0.2 0, 0.0 -2,-0.1 0.871 360.0 360.0 -95.8 360.0 25.8 37.0 54.9