==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GLYCOPROTEIN 26-JAN-96 1TLE . COMPND 2 MOLECULE: LAMININ; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR R.BAUMGARTNER,M.CZISCH,U.MAYER,E.P.SCHL,R.HUBER,R.TIMPL, . 58 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4441.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 37.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 13.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 172 0, 0.0 3,-0.0 0, 0.0 4,-0.0 0.000 360.0 360.0 360.0 98.3 13.8 65.1 88.1 2 2 A P + 0 0 132 0, 0.0 2,-0.5 0, 0.0 0, 0.0 0.875 360.0 46.3 -78.1 -41.5 14.9 63.4 84.9 3 3 A a S S- 0 0 27 2,-0.0 2,-0.1 20,-0.0 20,-0.0 -0.871 93.4-115.2-106.1 133.9 12.5 60.5 85.1 4 4 A Q + 0 0 175 -2,-0.5 2,-0.3 18,-0.1 20,-0.2 -0.407 59.4 126.1 -65.0 136.0 8.8 61.1 85.9 5 5 A b - 0 0 23 18,-0.1 30,-0.1 -2,-0.1 4,-0.1 -0.926 62.6 -73.1 178.9 157.2 7.7 59.6 89.2 6 6 A N - 0 0 46 -2,-0.3 2,-2.0 1,-0.2 30,-0.1 0.001 64.3 -87.8 -54.1 170.4 6.1 60.5 92.6 7 7 A D S S+ 0 0 111 1,-0.1 -1,-0.2 28,-0.1 28,-0.0 -0.404 96.5 104.4 -82.7 67.4 8.2 62.6 95.0 8 8 A N + 0 0 11 -2,-2.0 20,-1.3 20,-0.1 2,-0.3 -0.386 52.8 90.2-142.8 62.7 10.0 59.6 96.7 9 9 A I - 0 0 24 18,-0.2 18,-0.1 19,-0.1 8,-0.0 -0.997 63.6-126.2-154.1 152.4 13.6 59.4 95.4 10 10 A D - 0 0 69 -2,-0.3 6,-0.2 1,-0.1 -2,-0.0 -0.901 5.2-155.1-107.8 129.2 17.0 60.7 96.4 11 11 A P S S+ 0 0 110 0, 0.0 -1,-0.1 0, 0.0 5,-0.0 0.518 87.9 68.0 -75.9 -6.6 19.1 62.6 93.7 12 12 A N S S+ 0 0 142 2,-0.1 4,-0.0 4,-0.0 -2,-0.0 0.977 92.5 52.1 -78.5 -69.3 22.3 61.6 95.6 13 13 A A S S- 0 0 62 1,-0.1 2,-0.3 2,-0.0 3,-0.2 -0.079 85.9-124.9 -59.7 169.2 22.5 57.9 95.2 14 14 A V S S+ 0 0 140 1,-0.1 -1,-0.1 2,-0.1 -2,-0.1 -0.876 83.9 41.7-119.0 152.8 22.3 56.5 91.6 15 15 A G + 0 0 33 -2,-0.3 10,-0.2 2,-0.0 -1,-0.1 0.303 67.3 128.5 97.4 -11.6 19.9 53.8 90.2 16 16 A N S S+ 0 0 22 -6,-0.2 9,-1.7 -3,-0.2 10,-1.3 0.714 70.7 53.6 -52.5 -15.3 16.9 55.3 92.1 17 17 A a B S-A 24 0A 34 7,-0.3 2,-0.6 8,-0.2 7,-0.2 -0.916 91.3-116.4-122.4 150.0 15.2 55.3 88.7 18 18 A N > - 0 0 14 5,-2.2 4,-1.0 -2,-0.3 5,-0.4 -0.706 17.6-160.5 -84.3 122.1 14.7 52.4 86.2 19 19 A R T 4 S+ 0 0 248 -2,-0.6 -1,-0.1 2,-0.1 -2,-0.0 0.583 89.4 40.3 -79.3 -6.9 16.5 53.2 82.9 20 20 A L T 4 S+ 0 0 150 3,-0.1 -1,-0.1 -3,-0.0 -2,-0.1 0.807 125.7 27.7-108.2 -45.1 14.4 50.7 81.0 21 21 A T T 4 S- 0 0 78 2,-0.1 -2,-0.1 0, 0.0 3,-0.1 0.658 96.5-130.6 -91.7 -15.5 10.8 51.0 82.4 22 22 A G < + 0 0 42 -4,-1.0 2,-0.3 1,-0.2 -3,-0.1 0.997 65.4 115.2 66.0 61.0 11.1 54.7 83.4 23 23 A E S S- 0 0 35 -5,-0.4 -5,-2.2 -18,-0.1 -1,-0.2 -0.991 80.7 -74.3-156.6 152.5 9.7 54.3 86.9 24 24 A b B -A 17 0A 6 10,-0.6 3,-0.3 -2,-0.3 -7,-0.3 -0.290 42.1-171.6 -51.9 119.0 11.1 54.7 90.5 25 25 A L S S+ 0 0 88 -9,-1.7 2,-0.2 1,-0.2 -8,-0.2 0.826 79.6 14.3 -84.6 -31.4 13.3 51.5 90.9 26 26 A K S S- 0 0 116 -10,-1.3 -1,-0.2 -11,-0.1 6,-0.1 -0.637 77.5-154.0-143.9 84.7 13.8 52.1 94.7 27 27 A c - 0 0 22 4,-0.3 -18,-0.2 -3,-0.3 3,-0.2 -0.139 13.0-140.4 -53.4 155.7 11.5 54.7 96.4 28 28 A I S S+ 0 0 41 -20,-1.3 2,-2.4 1,-0.2 -1,-0.1 0.957 84.1 62.7 -86.4 -66.6 13.2 56.3 99.5 29 29 A Y S S- 0 0 113 1,-0.2 -1,-0.2 18,-0.1 27,-0.2 -0.339 123.4 -83.0 -64.6 77.7 10.5 56.7 102.2 30 30 A N S S+ 0 0 72 -2,-2.4 10,-1.8 -3,-0.2 2,-0.3 0.790 92.9 136.8 26.0 48.9 9.8 52.9 102.7 31 31 A T E -B 39 0B 7 8,-0.3 8,-0.3 -23,-0.1 -4,-0.3 -0.903 31.0-178.4-121.9 150.9 7.4 53.2 99.7 32 32 A A E +B 38 0B 38 6,-0.6 6,-1.5 -2,-0.3 3,-0.2 -0.887 28.0 88.9-139.3 171.5 6.9 50.8 96.8 33 33 A G S > S- 0 0 30 -2,-0.3 3,-2.1 3,-0.2 -6,-0.1 -0.375 87.1 -70.2 119.7 158.6 4.8 50.5 93.6 34 34 A F T 3 S+ 0 0 93 1,-0.3 -10,-0.6 -2,-0.1 -1,-0.1 0.836 139.6 27.7 -54.3 -29.6 5.2 51.6 90.0 35 35 A Y T 3 S- 0 0 122 -3,-0.2 -1,-0.3 -12,-0.1 -2,-0.1 -0.026 114.1-106.8-122.0 32.0 4.7 55.2 91.3 36 36 A c S < S+ 0 0 0 -3,-2.1 -3,-0.2 -12,-0.2 -2,-0.1 0.831 83.5 131.8 49.7 27.2 6.0 54.8 94.8 37 37 A D + 0 0 63 -6,-0.1 2,-0.2 2,-0.1 -1,-0.2 0.164 56.2 63.2 -94.8 20.4 2.3 55.1 95.8 38 38 A R E S-B 32 0B 146 -6,-1.5 -6,-0.6 9,-0.1 2,-0.4 -0.694 83.3-108.1-130.7-174.6 2.6 52.0 98.0 39 39 A d E -B 31 0B 25 -8,-0.3 -8,-0.3 -2,-0.2 3,-0.1 -0.955 38.9-103.9-120.1 135.4 4.4 51.0 101.2 40 40 A K > - 0 0 77 -10,-1.8 3,-2.0 -2,-0.4 2,-0.2 -0.214 51.1 -89.5 -55.8 147.1 7.3 48.4 101.3 41 41 A E T 3 S+ 0 0 171 1,-0.2 -1,-0.1 -10,-0.1 3,-0.1 -0.387 118.3 37.7 -60.2 123.6 6.2 45.0 102.6 42 42 A G T 3 S+ 0 0 33 -2,-0.2 2,-0.5 -3,-0.1 -1,-0.2 -0.130 110.5 66.5 122.4 -33.4 6.7 45.0 106.3 43 43 A F < + 0 0 76 -3,-2.0 15,-0.2 -13,-0.1 2,-0.2 -0.966 61.9 177.4-122.5 129.8 5.5 48.6 106.8 44 44 A F E +C 57 0C 118 13,-2.1 13,-1.3 -2,-0.5 2,-0.4 -0.630 31.8 82.8-118.5 178.9 2.0 49.7 106.2 45 45 A G E S-C 56 0C 49 11,-0.3 11,-0.3 -2,-0.2 10,-0.1 -0.963 89.7 -25.7 127.2-143.8 0.2 53.0 106.6 46 46 A N > - 0 0 113 9,-2.1 3,-0.7 8,-0.7 -8,-0.1 -0.920 43.8-176.2-116.0 110.1 0.1 56.0 104.2 47 47 A P T 3 S+ 0 0 13 0, 0.0 -9,-0.1 0, 0.0 -1,-0.1 0.562 83.7 60.0 -78.4 -9.8 3.1 56.3 101.8 48 48 A L T 3 S+ 0 0 95 -11,-0.1 7,-0.1 7,-0.1 -11,-0.0 -0.111 77.4 128.2-109.8 37.9 1.8 59.6 100.5 49 49 A A < - 0 0 22 -3,-0.7 7,-0.1 1,-0.1 6,-0.1 -0.655 61.1-136.0 -93.2 153.2 1.8 61.5 103.8 50 50 A P S S+ 0 0 122 0, 0.0 -1,-0.1 0, 0.0 5,-0.1 0.796 93.1 61.4 -75.0 -29.7 3.4 64.9 104.2 51 51 A N S > S- 0 0 92 1,-0.1 3,-0.7 3,-0.1 -2,-0.1 -0.828 73.2-148.3-101.3 138.6 4.9 63.8 107.5 52 52 A P G > S+ 0 0 99 0, 0.0 3,-1.0 0, 0.0 -1,-0.1 0.690 96.8 66.6 -75.8 -19.4 7.3 60.9 107.7 53 53 A A G 3 S+ 0 0 76 1,-0.2 4,-0.0 2,-0.1 -2,-0.0 0.731 107.7 39.9 -74.8 -18.1 6.0 60.0 111.2 54 54 A D G < S+ 0 0 113 -3,-0.7 -8,-0.7 2,-0.1 -1,-0.2 0.161 95.0 102.9-113.4 17.8 2.7 59.1 109.6 55 55 A K S < S- 0 0 15 -3,-1.0 -9,-2.1 1,-0.2 2,-0.9 0.556 96.2 -38.1 -71.8-130.7 4.1 57.4 106.5 56 56 A d E S+C 45 0C 2 -11,-0.3 -11,-0.3 -27,-0.2 2,-0.2 -0.816 74.8 167.7-101.1 102.9 4.1 53.6 106.3 57 57 A K E C 44 0C 152 -13,-1.3 -13,-2.1 -2,-0.9 -15,-0.1 -0.663 360.0 360.0-109.2 168.3 5.0 52.2 109.8 58 58 A A 0 0 121 -15,-0.2 -1,-0.1 -2,-0.2 -13,-0.1 0.911 360.0 360.0 -64.5 360.0 4.7 48.6 111.2