==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN TRANSPORT 10-JUN-04 1TM6 . COMPND 2 MOLECULE: PREPROTEIN TRANSLOCASE SECA SUBUNIT; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR W.M.MATOUSEK,A.T.ALEXANDRESCU . 22 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2232.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 14 63.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 9.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 18.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 90 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 30.3 -5.5 -6.8 -4.9 2 2 A R + 0 0 201 1,-0.2 2,-1.5 2,-0.0 8,-0.1 0.877 360.0 161.1 44.6 38.6 -2.9 -7.2 -2.1 3 3 A N + 0 0 116 1,-0.1 -1,-0.2 6,-0.1 8,-0.2 -0.547 7.2 146.3 -90.5 76.3 -0.9 -4.5 -4.0 4 4 A D B > +A 10 0A 10 -2,-1.5 5,-1.5 6,-1.4 6,-1.0 -0.547 14.0 151.9-110.8 68.7 1.4 -3.4 -1.2 5 5 A P T >>5 + 0 0 76 0, 0.0 4,-2.4 0, 0.0 3,-2.0 0.873 36.4 84.4 -61.5-107.0 4.5 -2.6 -3.2 6 6 A C T 345S- 0 0 54 1,-0.3 3,-0.1 2,-0.2 -2,-0.1 0.041 121.1 -45.4 33.5-149.1 6.7 0.1 -1.4 7 7 A P T 345S+ 0 0 115 0, 0.0 -1,-0.3 0, 0.0 -3,-0.0 0.077 133.7 75.9 -95.3 24.0 8.9 -1.6 1.2 8 8 A C T <45 - 0 0 32 -3,-2.0 -2,-0.2 -4,-0.2 3,-0.1 0.846 67.4-169.5-100.0 -46.1 6.0 -3.7 2.4 9 9 A G << + 0 0 66 -4,-2.4 2,-0.2 -5,-1.5 -3,-0.1 0.987 57.0 74.4 54.1 69.8 5.6 -6.3 -0.3 10 10 A S B S-A 4 0A 54 -6,-1.0 -6,-1.4 -8,-0.1 2,-0.3 -0.573 83.1 -72.3-167.1-126.6 2.3 -7.7 0.9 11 11 A G S S+ 0 0 17 -8,-0.2 2,-4.3 -2,-0.2 0, 0.0 -0.994 93.9 0.2-156.2 151.3 -1.4 -6.7 0.9 12 12 A K S >> S+ 0 0 151 -2,-0.3 4,-1.4 1,-0.2 3,-0.9 -0.180 107.2 88.3 65.2 -58.4 -3.7 -4.1 2.6 13 13 A K H >> S+ 0 0 114 -2,-4.3 4,-2.3 1,-0.3 3,-1.9 0.876 81.4 54.3 -31.9 -72.4 -0.6 -2.9 4.6 14 14 A Y H 3>>S+ 0 0 70 1,-0.3 5,-2.7 2,-0.3 4,-1.5 0.863 101.7 59.7 -35.0 -50.1 0.4 -0.3 1.9 15 15 A K H <4>S+ 0 0 158 -3,-0.9 5,-0.9 1,-0.3 -1,-0.3 0.940 114.6 36.0 -48.8 -45.5 -3.1 1.1 2.1 16 16 A Q H <<5S+ 0 0 170 -3,-1.9 -1,-0.3 -4,-1.4 -2,-0.3 0.734 130.8 35.5 -79.4 -21.5 -2.4 1.8 5.8 17 17 A C H <5S+ 0 0 54 -4,-2.3 -3,-0.2 -5,-0.3 -2,-0.2 0.895 142.7 0.6 -95.9 -65.6 1.3 2.6 5.0 18 18 A H T <5S+ 0 0 90 -4,-1.5 -3,-0.2 1,-0.1 -4,-0.1 0.311 118.1 77.8-108.2 8.9 1.4 4.4 1.7 19 19 A G T