==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 23-JUN-04 1TTN . COMPND 2 MOLECULE: DENDRITIC CELL-DERIVED UBIQUITIN-LIKE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.Y.HU . 80 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5396.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 65.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 5.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 18.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 13.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 15.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 21 A G 0 0 53 0, 0.0 22,-0.3 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 69.4 -15.2 -3.2 -3.1 2 22 A Y + 0 0 202 1,-0.2 2,-0.7 19,-0.1 0, 0.0 0.851 360.0 26.5-101.3 -61.4 -16.6 -3.0 0.4 3 23 A E S S+ 0 0 180 18,-0.1 2,-0.4 2,-0.0 -1,-0.2 -0.856 74.3 166.4-111.0 97.9 -14.1 -4.8 2.7 4 24 A C E -A 20 0A 12 16,-2.1 16,-2.9 -2,-0.7 2,-0.5 -0.937 14.2-173.3-115.9 132.8 -10.6 -4.7 1.2 5 25 A Q E -A 19 0A 72 59,-1.2 2,-0.4 -2,-0.4 14,-0.2 -0.935 6.1-173.0-128.6 108.9 -7.5 -5.6 3.2 6 26 A L E -A 18 0A 0 12,-1.9 12,-2.1 -2,-0.5 2,-0.5 -0.862 16.6-139.8-106.7 132.6 -4.1 -5.0 1.6 7 27 A R E -Ab 17 69A 61 61,-2.0 63,-1.9 -2,-0.4 2,-0.5 -0.765 15.8-150.4 -90.9 128.6 -0.8 -6.1 3.1 8 28 A L E -Ab 16 70A 2 8,-0.9 8,-1.9 -2,-0.5 2,-0.9 -0.873 5.7-160.0-104.1 126.6 2.1 -3.6 2.7 9 29 A R E +Ab 15 71A 89 61,-2.2 63,-2.0 -2,-0.5 3,-0.3 -0.809 26.6 169.5-104.4 93.2 5.7 -4.9 2.5 10 30 A L E >> +A 14 0A 2 4,-2.6 3,-4.4 -2,-0.9 4,-2.3 -0.445 56.6 22.7 -99.2 173.9 7.9 -1.9 3.4 11 31 A S T 34 S- 0 0 73 1,-0.3 -1,-0.2 2,-0.2 62,-0.1 0.592 128.5 -73.6 48.4 8.0 11.6 -1.5 4.2 12 32 A T T 34 S+ 0 0 116 60,-0.5 -1,-0.3 -3,-0.3 -2,-0.1 0.627 137.5 36.9 81.7 15.7 11.8 -4.7 2.2 13 33 A G T <4 S+ 0 0 50 -3,-4.4 2,-0.6 1,-0.0 -2,-0.2 0.204 78.0 116.9 176.0 33.7 10.3 -6.6 5.1 14 34 A K E < -A 10 0A 75 -4,-2.3 -4,-2.6 58,-0.1 2,-0.8 -0.731 38.9-178.0-117.9 79.9 7.7 -4.4 6.7 15 35 A D E +A 9 0A 62 -2,-0.6 2,-0.3 -6,-0.3 -6,-0.2 -0.713 17.4 148.1 -87.7 112.1 4.4 -6.2 6.3 16 36 A L E -A 8 0A 51 -8,-1.9 -8,-0.9 -2,-0.8 2,-0.4 -0.915 33.9-146.5-144.6 109.2 1.5 -4.2 7.8 17 37 A K E -A 7 0A 71 -2,-0.3 2,-0.3 -10,-0.3 -10,-0.3 -0.653 9.9-153.2 -85.0 132.7 -1.9 -4.5 6.1 18 38 A L E -A 6 0A 21 -12,-2.1 -12,-1.9 -2,-0.4 2,-0.8 -0.803 20.4-117.4-104.0 144.5 -4.2 -1.5 6.0 19 39 A V E +A 5 0A 111 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.720 46.9 168.9 -82.3 112.0 -8.0 -1.7 5.9 20 40 A V E -A 4 0A 6 -16,-2.9 -16,-2.1 -2,-0.8 2,-0.3 -0.761 27.0-155.7-121.9 168.4 -9.0 -0.1 2.6 21 41 A R > - 0 0 118 -2,-0.3 2,-4.6 -18,-0.2 3,-0.7 -0.795 50.7 -87.3-151.9 101.5 -12.2 0.1 0.5 22 42 A S T 3 S+ 0 0 12 1,-0.3 37,-0.7 -2,-0.3 36,-0.1 0.154 129.0 61.1 29.0 -48.0 -12.1 0.8 -3.3 23 43 A T T 3 S+ 0 0 74 -2,-4.6 -1,-0.3 -22,-0.3 5,-0.2 0.645 102.7 55.7 -73.7 -13.4 -12.0 4.6 -2.6 24 44 A D S <> S+ 0 0 35 -3,-0.7 4,-2.3 4,-0.1 3,-0.3 0.969 73.8 153.3 -80.3 -75.1 -8.7 4.0 -0.7 25 45 A T H > S- 0 0 2 2,-0.2 4,-3.7 1,-0.2 3,-0.4 0.396 73.3 -49.7 57.8 157.8 -6.4 2.3 -3.2 26 46 A V H > S+ 0 0 2 28,-0.3 4,-2.5 1,-0.2 -1,-0.2 0.680 139.4 59.6 -29.3 -32.0 -2.6 2.5 -3.1 27 47 A F H > S+ 0 0 81 -3,-0.3 4,-2.4 2,-0.2 -1,-0.2 0.999 117.0 26.4 -65.7 -70.0 -3.1 6.3 -2.8 28 48 A H H X S+ 0 0 73 -4,-2.3 4,-1.6 -3,-0.4 5,-0.2 0.918 120.7 60.3 -57.3 -41.2 -5.1 6.4 0.4 29 49 A M H >X S+ 0 0 0 -4,-3.7 4,-1.4 1,-0.3 3,-0.8 0.937 107.8 43.8 -45.8 -48.9 -3.3 3.1 1.1 30 50 A K H 3X S+ 0 0 56 -4,-2.5 4,-1.8 -5,-0.4 5,-0.3 0.841 99.0 71.4 -65.4 -36.2 -0.2 5.3 0.9 31 51 A R H 3X S+ 0 0 123 -4,-2.4 4,-1.2 1,-0.3 -1,-0.3 0.869 108.5 36.6 -47.7 -35.9 -2.1 7.9 2.9 32 52 A R H S+ 0 0 124 -4,-1.6 5,-2.1 -3,-0.8 4,-1.2 0.779 100.5 74.2 -87.4 -31.3 -1.5 5.4 5.7 33 53 A L H <>S+ 0 0 2 -4,-1.4 6,-3.6 1,-0.2 5,-1.5 0.847 112.1 32.2 -49.5 -32.2 1.9 4.3 4.5 34 54 A H H <5S+ 0 0 64 -4,-1.8 6,-0.3 4,-0.3 -1,-0.2 0.808 131.3 35.8 -90.7 -38.4 2.9 7.7 5.9 35 55 A A H <5S+ 0 0 52 -4,-1.2 -3,-0.2 -5,-0.3 -2,-0.2 0.974 129.2 28.5 -78.8 -63.0 0.3 7.7 8.7 36 56 A A T <5S+ 0 0 55 -4,-1.2 -3,-0.2 1,-0.1 -4,-0.1 0.917 140.6 21.6 -66.8 -45.4 0.2 4.0 9.8 37 57 A E T S- 0 0 62 0, 0.0 3,-0.5 0, 0.0 -3,-0.0 0.352 118.6 -59.0 -68.5-152.4 8.4 11.7 2.0 42 62 A G T 3 S+ 0 0 69 1,-0.2 -3,-0.0 3,-0.0 -2,-0.0 0.287 113.0 97.8 -77.5 13.2 9.5 10.2 -1.3 43 63 A S T 3 + 0 0 12 1,-0.2 2,-0.7 31,-0.1 -1,-0.2 0.192 55.4 97.2 -84.9 16.6 10.0 6.9 0.5 44 64 A Q < + 0 0 19 -3,-0.5 2,-1.0 -4,-0.1 -1,-0.2 -0.584 44.3 159.8-107.3 69.7 6.6 5.8 -0.7 45 65 A R E -C 73 0A 144 28,-1.6 28,-0.7 -2,-0.7 2,-0.2 -0.787 29.7-148.8 -94.6 100.7 7.4 3.7 -3.8 46 66 A W E +C 72 0A 68 -2,-1.0 7,-0.8 26,-0.2 2,-0.3 -0.491 25.1 167.2 -71.6 131.0 4.4 1.5 -4.4 47 67 A F E -CD 71 52A 58 24,-1.5 24,-2.4 5,-0.3 2,-0.4 -0.967 15.5-175.9-150.4 129.4 5.2 -1.9 -6.0 48 68 A F E > S- D 0 51A 39 3,-3.1 3,-1.3 -2,-0.3 22,-0.1 -0.985 77.7 -13.2-129.9 123.4 3.2 -5.1 -6.5 49 69 A S T 3 S- 0 0 111 -2,-0.4 -1,-0.1 20,-0.4 21,-0.1 0.548 132.9 -50.8 67.1 6.0 4.6 -8.3 -8.0 50 70 A G T 3 S+ 0 0 54 1,-0.4 -1,-0.3 21,-0.1 -3,-0.0 0.525 118.9 101.2 108.3 9.4 7.6 -6.2 -9.2 51 71 A R E < S-D 48 0A 180 -3,-1.3 -3,-3.1 0, 0.0 -1,-0.4 -0.952 78.3-101.6-127.9 147.6 5.7 -3.4 -10.9 52 72 A P E -D 47 0A 68 0, 0.0 -5,-0.3 0, 0.0 2,-0.1 -0.499 39.9-140.5 -69.6 123.5 4.8 0.2 -9.7 53 73 A L - 0 0 23 -7,-0.8 -7,-0.2 -2,-0.3 2,-0.1 -0.385 10.5-138.7 -82.8 162.0 1.2 0.4 -8.5 54 74 A T > - 0 0 65 -2,-0.1 3,-0.7 -7,-0.0 -28,-0.3 -0.415 32.2 -92.6-108.4-173.6 -1.1 3.3 -9.2 55 75 A D T 3 S+ 0 0 92 1,-0.2 -27,-0.2 -29,-0.2 -2,-0.0 0.060 119.5 52.9 -90.1 24.6 -3.7 5.2 -7.1 56 76 A K T 3 S+ 0 0 85 -29,-0.1 -1,-0.2 2,-0.1 4,-0.2 -0.010 71.4 107.6-147.6 31.7 -6.5 2.9 -8.3 57 77 A M S <> S+ 0 0 34 -3,-0.7 4,-1.9 2,-0.1 5,-0.3 0.877 71.2 58.9 -82.5 -37.6 -5.3 -0.6 -7.6 58 78 A K H >> S+ 0 0 2 1,-0.3 4,-1.8 2,-0.2 3,-1.1 0.974 112.8 35.8 -57.7 -65.7 -7.5 -1.5 -4.7 59 79 A F H 34 S+ 0 0 110 -37,-0.7 -1,-0.3 1,-0.3 -2,-0.1 0.650 118.9 56.0 -62.3 -14.3 -10.9 -1.1 -6.4 60 80 A E H 34 S+ 0 0 123 -4,-0.2 -1,-0.3 -3,-0.2 -2,-0.2 0.709 115.0 34.8 -90.6 -22.5 -9.2 -2.5 -9.5 61 81 A E H << + 0 0 72 -4,-1.9 -2,-0.2 -3,-1.1 -3,-0.2 0.909 65.2 172.3 -92.0 -65.6 -8.0 -5.7 -7.9 62 82 A L < + 0 0 65 -4,-1.8 -3,-0.1 -5,-0.3 -4,-0.1 0.348 61.3 91.8 70.1 -7.0 -10.7 -6.6 -5.4 63 83 A K + 0 0 123 1,-0.1 5,-0.3 -5,-0.1 3,-0.2 -0.009 53.6 102.0-105.1 27.9 -8.8 -9.9 -4.9 64 84 A I + 0 0 4 -6,-0.2 -59,-1.2 1,-0.2 -1,-0.1 -0.501 29.0 140.7-110.0 62.0 -6.7 -8.6 -2.0 65 85 A P S S- 0 0 80 0, 0.0 -1,-0.2 0, 0.0 -59,-0.0 0.805 92.6 -56.6 -70.8 -29.3 -8.5 -10.1 1.0 66 86 A K S S+ 0 0 109 -3,-0.2 -59,-0.1 -59,-0.1 -2,-0.1 0.121 130.0 75.9 178.3 -36.4 -5.1 -10.8 2.7 67 87 A D S S+ 0 0 124 -4,-0.1 2,-0.3 -61,-0.1 -3,-0.1 0.866 81.4 83.0 -62.7 -37.7 -3.0 -12.9 0.3 68 88 A Y + 0 0 69 -5,-0.3 -61,-2.0 -63,-0.2 2,-0.4 -0.542 60.5 179.9 -73.9 128.6 -2.3 -9.8 -1.9 69 89 A V E -b 7 0A 41 -2,-0.3 2,-0.6 -63,-0.2 -20,-0.4 -0.977 19.5-147.3-135.8 121.1 0.6 -7.7 -0.6 70 90 A V E -b 8 0A 2 -63,-1.9 -61,-2.2 -2,-0.4 2,-0.5 -0.769 17.5-143.1 -89.6 121.6 1.9 -4.5 -2.2 71 91 A Q E -bC 9 47A 63 -24,-2.4 -24,-1.5 -2,-0.6 2,-0.2 -0.715 18.1-165.6 -88.1 128.0 5.6 -4.0 -1.6 72 92 A V E - C 0 46A 0 -63,-2.0 2,-0.5 -2,-0.5 -60,-0.5 -0.625 13.9-130.7-106.9 168.6 6.8 -0.4 -1.1 73 93 A I E + C 0 45A 43 -28,-0.7 -28,-1.6 -2,-0.2 2,-0.3 -0.976 30.1 160.8-127.4 121.0 10.2 1.1 -1.2 74 94 A V + 0 0 17 -2,-0.5 -31,-0.1 -30,-0.2 -30,-0.1 -0.892 14.2 178.2-141.2 105.8 11.5 3.4 1.6 75 95 A S + 0 0 90 -2,-0.3 -1,-0.0 1,-0.1 -32,-0.0 0.035 66.5 85.3 -94.9 26.2 15.3 4.0 2.0 76 96 A Q + 0 0 89 1,-0.1 -1,-0.1 -33,-0.1 -33,-0.1 -0.732 42.1 163.3-130.2 83.8 14.7 6.4 4.9 77 97 A P S S- 0 0 112 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.883 92.5 -10.3 -66.3 -40.0 14.4 4.5 8.2 78 98 A V S S- 0 0 122 1,-0.0 -2,-0.1 0, 0.0 0, 0.0 0.065 105.2-104.8-148.9 25.7 15.0 7.6 10.3 79 99 A Q 0 0 126 1,-0.2 -3,-0.0 0, 0.0 -1,-0.0 0.377 360.0 360.0 60.8 155.8 16.1 10.2 7.8 80 100 A N 0 0 200 -3,-0.0 -1,-0.2 -4,-0.0 0, 0.0 -0.409 360.0 360.0 59.5 360.0 19.7 11.4 7.4