==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REGULATION 14-SEP-94 1TVS . COMPND 2 MOLECULE: TRANSACTIVATOR PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: EQUINE INFECTIOUS ANEMIA VIRUS; . AUTHOR P.ROESCH,H.STICHT . 75 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6600.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 50.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 10.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 19 25.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A L 0 0 194 0, 0.0 2,-0.8 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 107.6 38.4 -25.9 10.9 2 2 A E + 0 0 133 1,-0.1 2,-0.1 2,-0.0 0, 0.0 -0.820 360.0 149.0-101.9 100.6 39.7 -23.4 8.3 3 3 A D + 0 0 86 -2,-0.8 2,-2.1 1,-0.0 3,-0.2 -0.479 4.2 159.6-128.1 61.1 42.3 -21.1 10.1 4 4 A R + 0 0 171 1,-0.2 -2,-0.0 -2,-0.1 -1,-0.0 -0.372 35.8 116.7 -81.8 62.1 44.8 -20.2 7.2 5 5 A R + 0 0 185 -2,-2.1 -1,-0.2 5,-0.1 6,-0.1 0.170 33.9 160.5-113.4 14.1 46.1 -17.1 9.1 6 6 A I >>> - 0 0 98 -3,-0.2 4,-2.6 1,-0.1 5,-0.9 -0.180 36.7-134.1 -45.0 111.9 49.8 -18.3 9.6 7 7 A P T 345S+ 0 0 107 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.419 84.2 25.3 -72.9 141.4 51.8 -15.1 10.3 8 8 A G T 345S+ 0 0 62 -2,-0.1 -2,-0.1 1,-0.1 0, 0.0 0.664 137.2 26.0 79.2 16.2 55.1 -14.5 8.4 9 9 A T T <>5S+ 0 0 51 -3,-0.9 4,-2.5 -4,-0.1 -1,-0.1 0.237 110.2 57.1-171.4 -44.6 54.0 -16.8 5.5 10 10 A A H X5S+ 0 0 15 -4,-2.6 4,-0.9 2,-0.2 -4,-0.1 0.978 117.2 37.5 -71.7 -50.1 50.1 -17.1 4.9 11 11 A E H >4 S+ 0 0 80 1,-0.2 4,-1.3 3,-0.1 -2,-0.2 0.902 97.9 66.5 -64.8 -41.6 53.0 -13.4 2.6 13 13 A N H 3< S+ 0 0 104 -4,-2.5 2,-1.2 2,-0.2 -1,-0.2 0.782 73.7 98.6 -51.1 -32.5 51.5 -16.3 0.4 14 14 A L T << S- 0 0 141 -4,-0.9 3,-0.4 -3,-0.6 2,-0.3 -0.451 122.2 -31.7 -63.6 93.4 49.0 -13.8 -1.1 15 15 A Q T 4 S- 0 0 167 -2,-1.2 -1,-0.2 1,-0.2 -2,-0.2 -0.019 80.4-136.6 81.0 -31.4 51.1 -13.1 -4.4 16 16 A K < + 0 0 106 -4,-1.3 -1,-0.2 -2,-0.3 -3,-0.1 0.872 49.8 154.4 46.8 43.3 54.5 -13.6 -2.5 17 17 A S - 0 0 55 -3,-0.4 -1,-0.1 -5,-0.2 3,-0.1 -0.252 59.1-103.2 -89.7-178.1 55.9 -10.5 -4.3 18 18 A S - 0 0 38 1,-0.3 2,-0.2 -2,-0.1 -1,-0.1 -0.191 63.8 -98.1-100.4 42.9 58.8 -8.2 -3.0 19 19 A G - 0 0 56 -2,-0.1 -1,-0.3 2,-0.0 2,-0.2 -0.572 41.8-161.2 80.3-141.6 56.5 -5.3 -1.8 20 20 A G + 0 0 47 -2,-0.2 37,-0.0 -3,-0.1 -1,-0.0 -0.640 57.1 20.1 163.5 -99.4 56.0 -2.3 -4.3 21 21 A V - 0 0 142 -2,-0.2 -2,-0.0 1,-0.1 52,-0.0 -0.904 48.8-165.1-107.7 127.5 54.7 1.1 -3.2 22 22 A P - 0 0 86 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 0.794 29.4-135.8 -77.3 -32.2 54.9 2.2 0.5 23 23 A G + 0 0 70 1,-0.1 -2,-0.0 2,-0.0 2,-0.0 0.925 54.5 141.3 75.6 46.5 52.4 5.2 0.1 24 24 A Q + 0 0 79 1,-0.1 8,-0.2 2,-0.0 -1,-0.1 -0.312 58.2 58.5-113.4 48.3 54.5 7.7 2.2 25 25 A N - 0 0 80 6,-0.1 2,-2.8 7,-0.1 6,-0.3 0.562 58.4-177.8-137.9 -45.1 54.0 10.9 0.1 26 26 A T - 0 0 80 1,-0.2 -2,-0.0 4,-0.1 3,-0.0 -0.186 60.1 -95.8 68.0 -50.6 50.2 11.8 -0.2 27 27 A G S S- 0 0 43 -2,-2.8 2,-0.2 2,-0.0 -1,-0.2 -0.141 80.7 -49.0 129.4 -31.4 50.9 14.8 -2.4 28 28 A G S S+ 0 0 22 -3,-0.1 2,-2.8 5,-0.0 3,-0.2 -0.905 109.6 61.4 154.8 178.1 50.9 17.4 0.4 29 29 A Q S S+ 0 0 198 2,-0.4 -3,-0.1 1,-0.3 3,-0.0 -0.358 116.0 44.4 71.9 -63.3 48.9 18.7 3.5 30 30 A E S S- 0 0 141 -2,-2.8 -1,-0.3 -5,-0.1 2,-0.1 0.927 137.8 -16.4 -74.4 -46.3 49.3 15.3 5.2 31 31 A A S S+ 0 0 39 -6,-0.3 -2,-0.4 -3,-0.2 -6,-0.1 -0.247 87.4 100.5-131.3-140.4 53.0 14.9 4.3 32 32 A R - 0 0 156 -8,-0.2 -3,-0.2 -4,-0.2 2,-0.2 0.945 57.1-172.0 50.7 58.2 55.5 16.6 1.8 33 33 A P + 0 0 72 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 -0.531 22.4 150.4 -81.1 145.7 57.0 19.0 4.5 34 34 A N + 0 0 97 -2,-0.2 0, 0.0 5,-0.1 0, 0.0 -0.449 17.5 125.7-175.2 89.7 59.5 21.8 3.5 35 35 A Y S S+ 0 0 165 -2,-0.1 0, 0.0 0, 0.0 0, 0.0 0.714 82.1 26.6-116.1 -65.5 59.7 25.0 5.6 36 36 A H S S- 0 0 99 1,-0.1 -2,-0.0 0, 0.0 0, 0.0 0.281 106.5-110.3 -87.0 11.0 63.3 25.8 6.8 37 37 A a S > S+ 0 0 73 1,-0.1 4,-1.9 3,-0.0 5,-0.1 0.267 101.1 100.9 76.2 -9.2 64.9 23.9 3.8 38 38 A Q H > S+ 0 0 100 2,-0.2 4,-3.0 1,-0.2 5,-0.2 0.934 83.2 50.4 -70.7 -38.9 66.2 21.1 6.1 39 39 A L H > S+ 0 0 29 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.896 108.0 53.1 -64.6 -31.7 63.2 19.1 4.9 40 40 A a H > S+ 0 0 25 2,-0.2 4,-1.1 1,-0.2 -2,-0.2 0.878 107.0 51.8 -70.1 -30.9 64.4 20.0 1.3 41 41 A F H >< S+ 0 0 100 -4,-1.9 3,-1.3 2,-0.2 4,-0.5 0.974 108.5 49.5 -67.1 -47.2 67.8 18.6 2.5 42 42 A L H 3< S+ 0 0 46 -4,-3.0 3,-0.5 1,-0.3 -2,-0.2 0.857 104.1 61.0 -58.9 -30.5 66.0 15.4 3.5 43 43 A R H 3< S+ 0 0 147 -4,-1.8 -1,-0.3 -5,-0.2 -2,-0.2 0.841 127.9 10.3 -65.4 -29.7 64.4 15.6 -0.0 44 44 A S << + 0 0 48 -3,-1.3 2,-2.6 -4,-1.1 -2,-0.2 -0.051 68.5 160.9-143.4 44.6 68.0 15.3 -1.5 45 45 A L S > S- 0 0 49 -3,-0.5 4,-1.5 -4,-0.5 3,-0.3 -0.344 100.1 -53.7 -61.5 72.2 70.7 14.3 1.2 46 46 A G T 4 S- 0 0 69 -2,-2.6 2,-1.4 1,-0.2 -1,-0.3 0.706 85.5 -99.9 59.6 12.4 73.1 13.1 -1.6 47 47 A I T >> S+ 0 0 105 1,-0.2 4,-1.4 -5,-0.0 3,-1.2 0.075 117.1 90.8 57.4 -19.0 69.8 11.0 -2.4 48 48 A D H 3> S+ 0 0 99 -2,-1.4 4,-1.9 -3,-0.3 -1,-0.2 0.871 81.9 60.7 -68.4 -26.8 71.3 7.8 -0.7 49 49 A Y H 3X S+ 0 0 71 -4,-1.5 4,-2.9 2,-0.2 -1,-0.3 0.746 99.1 55.1 -69.6 -16.5 69.5 9.3 2.4 50 50 A L H <> S+ 0 0 36 -3,-1.2 4,-1.3 2,-0.3 -2,-0.2 0.870 101.6 53.0 -87.3 -19.9 66.2 8.9 0.3 51 51 A D H >< S+ 0 0 49 -4,-1.4 3,-0.5 2,-0.2 7,-0.3 0.936 108.6 52.7 -67.3 -36.6 67.2 5.3 -0.1 52 52 A A H >< S+ 0 0 36 -4,-1.9 3,-2.0 1,-0.2 -2,-0.3 0.966 103.1 54.3 -58.2 -54.6 67.3 6.0 3.8 53 53 A S H 3< S+ 0 0 40 -4,-2.9 -1,-0.2 1,-0.3 -2,-0.2 0.797 124.4 27.9 -52.1 -25.5 63.7 7.4 3.6 54 54 A L T XX S+ 0 0 76 -4,-1.3 3,-2.1 -3,-0.5 4,-0.9 0.081 76.0 128.9-122.9 24.2 62.9 4.0 1.9 55 55 A R H <> + 0 0 84 -3,-2.0 4,-1.7 1,-0.3 6,-0.2 0.708 57.4 86.6 -57.1 -12.5 65.6 1.5 3.5 56 56 A K H 34 S+ 0 0 125 -4,-0.2 -1,-0.3 1,-0.2 -2,-0.1 0.860 99.5 35.6 -54.1 -31.9 62.5 -0.9 4.3 57 57 A K H <> S+ 0 0 44 -3,-2.1 4,-0.7 -6,-0.2 -1,-0.2 0.811 109.5 63.3 -89.7 -34.2 63.1 -2.2 0.7 58 58 A N H X S+ 0 0 39 -4,-0.9 2,-3.1 -7,-0.3 4,-0.8 0.731 75.2 92.4 -66.3 -16.7 67.0 -1.9 0.8 59 59 A K H < S+ 0 0 130 -4,-1.7 -1,-0.2 1,-0.3 -3,-0.0 -0.394 109.5 17.6 -75.0 68.2 67.1 -4.5 3.7 60 60 A Q H >> S+ 0 0 121 -2,-3.1 3,-2.1 0, 0.0 4,-1.5 -0.114 99.7 101.2 154.0 -31.2 67.6 -7.1 0.8 61 61 A R H 3X + 0 0 24 -4,-0.7 4,-3.5 1,-0.3 5,-0.3 0.770 63.7 80.8 -47.9 -30.1 68.7 -4.5 -1.9 62 62 A L H 3< S+ 0 0 119 -4,-0.8 -1,-0.3 1,-0.2 4,-0.2 0.876 109.5 25.0 -47.9 -37.7 72.3 -5.6 -1.3 63 63 A K H <4 S+ 0 0 117 -3,-2.1 3,-0.5 2,-0.1 -1,-0.2 0.758 120.6 58.3 -97.1 -29.8 71.5 -8.6 -3.6 64 64 A A H >< S+ 0 0 13 -4,-1.5 3,-1.4 1,-0.2 5,-0.3 0.816 94.0 66.6 -71.5 -27.1 68.6 -6.9 -5.6 65 65 A I T 3< S+ 0 0 105 -4,-3.5 -1,-0.2 1,-0.3 -2,-0.1 0.875 112.0 34.8 -61.7 -32.0 71.0 -4.1 -6.8 66 66 A Q T 3 S+ 0 0 129 -3,-0.5 -1,-0.3 -5,-0.3 -2,-0.2 0.253 103.6 103.5-102.8 11.8 72.9 -6.9 -8.8 67 67 A Q S < S- 0 0 113 -3,-1.4 -3,-0.1 -6,-0.2 8,-0.0 -0.009 98.3 -82.7 -77.2-168.0 69.5 -8.8 -9.6 68 68 A G - 0 0 64 6,-0.0 -1,-0.1 1,-0.0 -3,-0.1 0.631 58.5-127.9 -73.4 -11.6 67.7 -8.7 -13.0 69 69 A R - 0 0 118 -5,-0.3 3,-0.1 5,-0.1 -4,-0.0 0.999 32.4-161.3 60.8 71.4 66.0 -5.3 -11.9 70 70 A Q - 0 0 99 1,-0.2 2,-2.8 2,-0.1 5,-0.4 -0.047 48.1 -46.0 -73.1-178.7 62.3 -6.2 -12.6 71 71 A P S S- 0 0 93 0, 0.0 2,-1.0 0, 0.0 -1,-0.2 -0.232 93.3 -78.1 -58.9 72.7 59.5 -3.6 -13.0 72 72 A Q S S+ 0 0 129 -2,-2.8 -2,-0.1 1,-0.2 -52,-0.1 0.171 124.2 88.1 54.5 -12.9 60.5 -1.4 -10.0 73 73 A Y S S+ 0 0 82 -2,-1.0 -1,-0.2 1,-0.2 -53,-0.0 0.869 90.7 47.5 -75.2 -35.2 58.9 -3.9 -7.5 74 74 A L 0 0 31 1,-0.2 -1,-0.2 -55,-0.0 -5,-0.1 0.874 360.0 360.0 -71.1 -37.5 62.2 -5.8 -7.4 75 75 A L 0 0 48 -5,-0.4 -1,-0.2 -10,-0.0 -3,-0.1 -0.393 360.0 360.0 80.1 360.0 64.2 -2.5 -6.9