==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-OCT-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 26-SEP-11 3TYS . COMPND 2 MOLECULE: PREDICTED TRANSCRIPTIONAL REGULATOR; . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; . AUTHOR P.J.STOGIOS,E.EVDOKIMOVA,Z.WAWRZAK,F.DEPARDIEU,P.COURVALIN, . 75 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5715.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 6.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 38.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -7 A R 0 0 257 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -29.7 3.1 14.5 8.3 2 -6 A E - 0 0 115 1,-0.0 2,-0.6 2,-0.0 0, 0.0 -0.613 360.0-154.8 -86.3 145.9 -0.2 13.5 10.0 3 -5 A N - 0 0 131 -2,-0.2 2,-0.2 2,-0.0 -1,-0.0 -0.851 27.2-173.9-118.3 87.7 -0.8 10.2 11.5 4 -4 A L - 0 0 100 -2,-0.6 3,-0.0 1,-0.1 -2,-0.0 -0.552 29.0-145.4 -91.1 153.7 -4.6 9.9 11.2 5 -3 A Y S S+ 0 0 205 -2,-0.2 2,-0.4 1,-0.1 -1,-0.1 0.293 86.2 63.6-104.4 14.3 -6.7 7.2 12.7 6 -2 A F + 0 0 190 1,-0.1 -1,-0.1 3,-0.0 -2,-0.1 -0.983 48.1 147.9-137.1 121.0 -9.2 7.2 9.8 7 -1 A Q + 0 0 152 -2,-0.4 -1,-0.1 1,-0.0 -2,-0.0 0.070 43.5 97.2-137.9 16.8 -7.9 6.2 6.3 8 0 A G + 0 0 36 66,-0.0 67,-2.5 2,-0.0 2,-0.3 0.408 65.3 74.8-101.5 0.2 -10.8 4.4 4.7 9 1 A X E -A 74 0A 107 65,-0.3 2,-0.3 66,-0.1 63,-0.1 -0.748 53.7-165.2-113.5 159.8 -12.5 7.1 2.5 10 2 A R E -A 73 0A 107 63,-2.9 63,-2.7 -2,-0.3 2,-0.1 -0.968 26.9-101.5-138.4 157.6 -11.6 8.7 -0.8 11 3 A V E -A 72 0A 23 -2,-0.3 2,-0.4 36,-0.3 61,-0.2 -0.420 29.8-161.7 -70.5 153.8 -12.6 11.6 -2.8 12 4 A S E -A 71 0A 5 59,-1.6 59,-1.6 -2,-0.1 3,-0.3 -0.989 13.5-168.4-136.1 133.6 -15.0 11.3 -5.7 13 5 A Y >> + 0 0 2 -2,-0.4 4,-1.4 31,-0.3 3,-0.8 0.167 52.9 117.5-103.5 16.9 -15.4 13.9 -8.5 14 6 A N H 3> S+ 0 0 67 1,-0.3 4,-1.8 2,-0.2 -1,-0.2 0.865 73.0 55.8 -53.1 -41.1 -18.5 12.4 -10.0 15 7 A K H 3> S+ 0 0 83 -3,-0.3 4,-2.4 1,-0.2 -1,-0.3 0.868 101.7 57.6 -64.9 -33.7 -20.6 15.4 -9.2 16 8 A L H <> S+ 0 0 1 53,-1.0 4,-2.4 -3,-0.8 -1,-0.2 0.919 105.3 50.0 -59.2 -43.2 -18.1 17.6 -11.1 17 9 A W H X S+ 0 0 72 -4,-1.4 4,-1.9 1,-0.2 -1,-0.2 0.902 111.2 49.1 -66.1 -39.7 -18.6 15.6 -14.3 18 10 A K H X S+ 0 0 138 -4,-1.8 4,-2.2 1,-0.2 -1,-0.2 0.917 110.6 50.8 -62.3 -42.9 -22.4 15.9 -13.9 19 11 A L H X S+ 0 0 20 -4,-2.4 4,-1.5 49,-0.2 -2,-0.2 0.911 106.3 54.3 -63.2 -42.2 -22.1 19.6 -13.4 20 12 A L H <>S+ 0 0 6 -4,-2.4 5,-2.7 1,-0.2 3,-0.3 0.932 109.7 47.3 -60.2 -44.0 -20.0 20.1 -16.5 21 13 A I H ><5S+ 0 0 118 -4,-1.9 3,-1.6 1,-0.2 -1,-0.2 0.908 107.9 56.0 -62.8 -40.2 -22.6 18.4 -18.6 22 14 A D H 3<5S+ 0 0 120 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.825 112.2 42.8 -57.8 -27.8 -25.3 20.5 -17.0 23 15 A R T 3<5S- 0 0 104 -4,-1.5 -1,-0.3 -3,-0.3 -2,-0.2 0.393 114.2-119.1 -98.1 4.5 -23.3 23.6 -18.1 24 16 A D T < 5 + 0 0 148 -3,-1.6 2,-0.3 -4,-0.3 -3,-0.2 0.901 69.6 136.3 52.8 43.4 -22.6 22.1 -21.6 25 17 A X < - 0 0 28 -5,-2.7 2,-0.3 -6,-0.1 -1,-0.2 -0.848 49.3-135.2-120.2 154.1 -18.9 22.2 -20.9 26 18 A K >> - 0 0 160 -2,-0.3 4,-1.5 -3,-0.1 3,-0.7 -0.719 28.9-111.5-102.7 158.4 -16.0 19.8 -21.5 27 19 A K H 3> S+ 0 0 117 -2,-0.3 4,-2.6 1,-0.3 5,-0.2 0.857 115.8 57.2 -64.0 -36.0 -13.3 19.0 -19.0 28 20 A G H 3> S+ 0 0 21 1,-0.2 4,-2.6 2,-0.2 -1,-0.3 0.837 102.8 56.5 -62.7 -32.9 -10.6 20.6 -21.0 29 21 A E H <> S+ 0 0 89 -3,-0.7 4,-2.2 2,-0.2 -1,-0.2 0.879 109.2 45.9 -59.7 -43.7 -12.6 23.9 -20.9 30 22 A L H X S+ 0 0 0 -4,-1.5 4,-2.2 2,-0.2 5,-0.3 0.944 112.7 50.3 -64.2 -49.4 -12.6 23.7 -17.2 31 23 A R H X>S+ 0 0 68 -4,-2.6 4,-1.7 1,-0.2 5,-1.5 0.923 115.8 41.6 -52.9 -51.7 -8.8 22.9 -17.0 32 24 A E H <5S+ 0 0 147 -4,-2.6 -1,-0.2 2,-0.2 -2,-0.2 0.849 112.3 52.0 -75.2 -36.8 -7.9 25.7 -19.3 33 25 A A H <5S+ 0 0 54 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.928 118.1 37.9 -60.8 -46.1 -10.2 28.4 -17.9 34 26 A V H <5S- 0 0 38 -4,-2.2 -2,-0.2 -5,-0.2 -1,-0.2 0.745 106.8-124.7 -79.7 -23.0 -9.0 27.8 -14.3 35 27 A G T <5 + 0 0 63 -4,-1.7 -3,-0.2 -5,-0.3 2,-0.2 0.695 46.4 166.1 87.1 18.9 -5.3 27.2 -15.2 36 28 A V < - 0 0 19 -5,-1.5 -1,-0.2 -6,-0.3 -2,-0.1 -0.457 38.9-113.2 -70.3 137.2 -5.0 23.8 -13.6 37 29 A S > - 0 0 60 -2,-0.2 4,-2.6 1,-0.1 5,-0.2 -0.244 24.4-110.7 -64.7 160.8 -1.8 21.9 -14.7 38 30 A K H > S+ 0 0 176 1,-0.2 4,-2.3 2,-0.2 5,-0.1 0.936 115.9 46.1 -60.2 -46.4 -2.1 18.8 -16.8 39 31 A S H > S+ 0 0 86 2,-0.2 4,-0.9 1,-0.2 -1,-0.2 0.885 113.9 47.9 -71.0 -36.4 -1.0 16.4 -14.1 40 32 A T H >> S+ 0 0 33 1,-0.2 3,-0.8 2,-0.2 4,-0.7 0.928 112.2 49.6 -66.0 -42.9 -3.2 18.0 -11.4 41 33 A F H >X S+ 0 0 9 -4,-2.6 3,-1.2 1,-0.3 4,-0.9 0.892 102.6 61.2 -64.1 -35.2 -6.1 17.9 -13.6 42 34 A A H 3X S+ 0 0 41 -4,-2.3 4,-0.7 1,-0.3 -1,-0.3 0.771 93.1 66.4 -60.6 -30.4 -5.5 14.3 -14.4 43 35 A K H X<>S+ 0 0 77 -4,-0.9 5,-2.7 -3,-0.8 3,-0.6 0.830 93.6 60.1 -59.1 -33.2 -5.9 13.5 -10.7 44 36 A L H X<5S+ 0 0 0 -3,-1.2 3,-1.4 -4,-0.7 -31,-0.3 0.927 102.0 51.2 -60.1 -44.1 -9.5 14.5 -11.0 45 37 A G H 3<5S+ 0 0 50 -4,-0.9 -1,-0.2 1,-0.3 -2,-0.2 0.689 114.3 45.7 -65.2 -17.2 -10.1 11.7 -13.6 46 38 A K T <<5S- 0 0 107 -4,-0.7 -1,-0.3 -3,-0.6 -2,-0.2 0.319 111.4-116.7-107.1 8.0 -8.5 9.3 -11.2 47 39 A N T < 5 + 0 0 67 -3,-1.4 2,-0.3 -4,-0.3 -36,-0.3 0.912 65.5 148.1 50.4 46.8 -10.4 10.4 -8.0 48 40 A E < - 0 0 90 -5,-2.7 -1,-0.2 -6,-0.1 -2,-0.1 -0.769 53.5 -90.9-106.8 152.8 -7.0 11.4 -6.5 49 41 A N - 0 0 115 -2,-0.3 2,-0.3 -3,-0.1 -1,-0.1 -0.346 41.2-178.4 -65.9 139.3 -6.7 14.3 -4.0 50 42 A V - 0 0 24 -2,-0.1 2,-0.0 -7,-0.1 -9,-0.0 -0.827 37.4 -81.7-124.0 169.3 -6.0 17.8 -5.2 51 43 A S > - 0 0 60 -2,-0.3 4,-2.0 1,-0.1 3,-0.4 -0.331 28.8-121.5 -69.1 153.7 -5.5 20.9 -3.1 52 44 A L H > S+ 0 0 110 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.823 114.0 65.2 -59.8 -31.1 -8.3 22.9 -1.7 53 45 A T H > S+ 0 0 111 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.920 104.0 45.2 -56.6 -45.9 -6.8 25.9 -3.6 54 46 A V H > S+ 0 0 26 -3,-0.4 4,-2.1 2,-0.2 -2,-0.2 0.936 114.1 48.3 -61.7 -46.3 -7.6 24.0 -6.8 55 47 A L H X S+ 0 0 9 -4,-2.0 4,-2.5 1,-0.2 -2,-0.2 0.892 109.9 51.7 -65.3 -38.3 -11.1 23.1 -5.7 56 48 A L H X S+ 0 0 90 -4,-3.0 4,-2.4 2,-0.2 -1,-0.2 0.877 108.0 52.6 -61.9 -40.3 -11.8 26.7 -4.6 57 49 A A H X S+ 0 0 34 -4,-1.9 4,-2.3 -5,-0.2 -2,-0.2 0.908 109.8 48.5 -63.6 -41.5 -10.7 28.0 -8.0 58 50 A I H X S+ 0 0 0 -4,-2.1 4,-2.8 1,-0.2 -2,-0.2 0.929 111.4 50.0 -63.3 -45.3 -13.1 25.5 -9.6 59 51 A C H X>S+ 0 0 11 -4,-2.5 5,-1.9 1,-0.2 4,-1.0 0.885 110.9 50.1 -58.6 -41.9 -15.9 26.6 -7.3 60 52 A E H <5S+ 0 0 157 -4,-2.4 3,-0.3 2,-0.2 -1,-0.2 0.925 114.3 43.3 -64.0 -47.0 -15.2 30.3 -8.1 61 53 A Y H <5S+ 0 0 100 -4,-2.3 -2,-0.2 1,-0.2 -1,-0.2 0.935 121.3 39.1 -66.9 -44.2 -15.3 29.7 -11.8 62 54 A L H <5S- 0 0 4 -4,-2.8 -1,-0.2 -5,-0.2 -2,-0.2 0.491 104.0-125.7 -85.5 -2.3 -18.4 27.5 -11.8 63 55 A N T <5S+ 0 0 132 -4,-1.0 2,-0.2 -3,-0.3 -3,-0.2 0.931 70.3 117.3 55.8 47.3 -20.2 29.5 -9.1 64 56 A C < - 0 0 26 -5,-1.9 2,-0.2 -6,-0.2 -1,-0.2 -0.678 58.9-115.9-133.4-176.3 -20.7 26.4 -7.0 65 57 A D > - 0 0 104 -2,-0.2 3,-2.0 -3,-0.1 4,-0.4 -0.729 37.9 -94.1-120.9 171.7 -19.8 24.9 -3.7 66 58 A F G >> S+ 0 0 59 1,-0.3 4,-2.4 -2,-0.2 3,-2.1 0.882 120.2 57.8 -57.0 -43.7 -17.8 22.0 -2.5 67 59 A G G 34 S+ 0 0 42 1,-0.3 -1,-0.3 2,-0.2 -52,-0.0 0.540 98.6 62.1 -69.6 -1.3 -20.7 19.6 -2.3 68 60 A D G <4 S+ 0 0 81 -3,-2.0 -1,-0.3 1,-0.1 -49,-0.2 0.513 118.8 23.6 -92.4 -8.0 -21.5 20.3 -5.9 69 61 A I T <4 S+ 0 0 1 -3,-2.1 -53,-1.0 -4,-0.4 2,-0.3 0.608 118.2 45.7-132.0 -19.7 -18.2 18.8 -7.1 70 62 A I < - 0 0 41 -4,-2.4 2,-0.3 -55,-0.2 -1,-0.3 -0.957 49.7-178.0-133.2 151.4 -16.8 16.4 -4.4 71 63 A E E -A 12 0A 88 -59,-1.6 -59,-1.6 -2,-0.3 2,-0.6 -0.988 27.2-125.9-140.5 147.1 -18.1 13.6 -2.3 72 64 A A E +A 11 0A 69 -2,-0.3 -61,-0.2 -61,-0.2 -2,-0.0 -0.860 39.5 172.6 -91.4 120.1 -16.5 11.4 0.4 73 65 A L E -A 10 0A 54 -63,-2.7 -63,-2.9 -2,-0.6 -2,-0.0 -0.887 41.3 -88.2-124.0 157.4 -16.9 7.7 -0.5 74 66 A P E A 9 0A 95 0, 0.0 -65,-0.3 0, 0.0 -66,-0.0 -0.344 360.0 360.0 -55.6 143.5 -15.6 4.5 0.9 75 67 A E 0 0 165 -67,-2.5 -66,-0.1 -3,-0.0 -67,-0.0 0.776 360.0 360.0 -64.3 360.0 -12.3 3.6 -0.8