==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 23-JUL-04 1U4A . COMPND 2 MOLECULE: UBIQUITIN-LIKE PROTEIN SMT3A; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.DING,Y.XU,H.DAI,Y.TANG,J.WU,Y.SHI . 79 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5793.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 69.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 7.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 19.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 17.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 17.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 14 A N 0 0 217 0, 0.0 2,-0.7 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 39.5 -20.0 -4.0 3.5 2 15 A D + 0 0 120 2,-0.0 2,-0.3 64,-0.0 20,-0.2 -0.805 360.0 154.6 -94.0 116.3 -17.8 -3.2 0.4 3 16 A H - 0 0 89 -2,-0.7 2,-0.5 18,-0.1 18,-0.2 -0.995 40.2-122.7-142.2 146.1 -14.1 -3.2 1.2 4 17 A I E -A 20 0A 2 16,-3.1 2,-1.1 -2,-0.3 16,-1.1 -0.780 16.6-147.8 -93.3 125.6 -10.9 -3.8 -0.8 5 18 A N E -A 19 0A 62 -2,-0.5 63,-1.2 61,-0.4 2,-0.5 -0.730 20.8-175.1 -94.2 89.4 -8.6 -6.7 0.3 6 19 A L E -Ab 18 68A 2 12,-1.6 12,-1.7 -2,-1.1 2,-0.9 -0.760 12.0-159.5 -90.2 123.7 -5.1 -5.5 -0.6 7 20 A K E -Ab 17 69A 79 61,-2.1 63,-2.0 -2,-0.5 2,-0.5 -0.815 11.1-167.9-104.9 93.2 -2.3 -8.0 0.0 8 21 A V E -Ab 16 70A 2 8,-1.6 8,-1.9 -2,-0.9 2,-0.6 -0.706 5.1-156.2 -85.5 125.3 0.9 -6.1 0.3 9 22 A A E -Ab 15 71A 31 61,-3.1 63,-0.6 -2,-0.5 6,-0.2 -0.897 8.9-147.1-105.7 117.1 4.1 -8.2 0.2 10 23 A G E >> -Ab 14 72A 10 4,-3.1 3,-1.0 -2,-0.6 4,-0.9 -0.517 21.7-121.3 -82.7 149.7 7.2 -6.7 1.7 11 24 A Q T 34 S+ 0 0 72 61,-1.4 -1,-0.1 1,-0.3 62,-0.1 0.694 109.5 69.6 -60.1 -19.6 10.7 -7.4 0.4 12 25 A D T 34 S- 0 0 124 2,-0.1 -1,-0.3 1,-0.1 -2,-0.1 -0.031 126.1 -95.4 -90.1 31.8 11.5 -8.7 3.9 13 26 A G T <4 S+ 0 0 77 -3,-1.0 2,-0.5 1,-0.2 -2,-0.2 0.887 80.0 145.9 58.2 41.1 9.3 -11.8 3.4 14 27 A S E < -A 10 0A 43 -4,-0.9 -4,-3.1 2,-0.0 2,-0.5 -0.948 31.6-167.1-115.7 127.3 6.4 -10.1 5.1 15 28 A V E +A 9 0A 123 -2,-0.5 2,-0.4 -6,-0.2 -6,-0.2 -0.946 17.1 160.8-117.1 115.3 2.7 -10.7 4.1 16 29 A V E -A 8 0A 44 -8,-1.9 -8,-1.6 -2,-0.5 2,-0.3 -0.998 20.8-154.0-136.9 134.2 0.1 -8.3 5.5 17 30 A Q E -A 7 0A 132 -2,-0.4 2,-0.3 -10,-0.2 -10,-0.2 -0.735 7.6-160.0-105.6 154.6 -3.5 -7.6 4.2 18 31 A F E -A 6 0A 39 -12,-1.7 -12,-1.6 -2,-0.3 2,-0.5 -0.983 8.7-148.2-135.8 146.2 -5.6 -4.5 4.8 19 32 A K E +A 5 0A 144 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.941 38.9 131.0-119.0 111.9 -9.3 -3.7 4.6 20 33 A I E -A 4 0A 30 -16,-1.1 -16,-3.1 -2,-0.5 2,-0.2 -0.860 53.3 -83.1-145.9 178.9 -10.4 -0.2 3.5 21 34 A K - 0 0 109 -2,-0.3 3,-0.4 -18,-0.2 -18,-0.1 -0.486 27.4-129.1 -87.4 160.0 -12.8 1.6 1.1 22 35 A R S S+ 0 0 117 1,-0.2 -1,-0.1 -20,-0.2 -19,-0.1 -0.057 94.8 78.1 -97.9 31.9 -12.1 2.3 -2.6 23 36 A H S S+ 0 0 154 2,-0.1 -1,-0.2 38,-0.0 39,-0.0 -0.067 83.5 68.1-128.3 31.6 -12.9 6.0 -2.2 24 37 A T S S- 0 0 29 -3,-0.4 -4,-0.0 34,-0.1 37,-0.0 -0.978 82.4 -95.1-148.2 158.0 -9.7 7.3 -0.6 25 38 A P >> - 0 0 37 0, 0.0 3,-1.4 0, 0.0 4,-0.5 -0.222 38.0-108.0 -70.8 163.3 -6.0 7.8 -1.4 26 39 A L H 3> S+ 0 0 3 31,-1.4 4,-3.8 1,-0.3 5,-0.4 0.630 103.8 91.5 -66.2 -13.0 -3.2 5.3 -0.6 27 40 A S H 3> S+ 0 0 25 28,-1.0 4,-1.6 30,-0.4 -1,-0.3 0.824 88.0 47.8 -51.3 -33.8 -2.1 7.7 2.1 28 41 A K H <> S+ 0 0 114 -3,-1.4 4,-2.8 2,-0.2 5,-0.2 0.970 117.7 37.3 -72.5 -56.4 -4.3 5.8 4.5 29 42 A L H X S+ 0 0 0 -4,-0.5 4,-2.4 2,-0.2 5,-0.2 0.923 119.3 49.7 -61.8 -46.6 -3.2 2.3 3.6 30 43 A M H X S+ 0 0 10 -4,-3.8 4,-3.4 2,-0.2 5,-0.3 0.932 114.8 43.8 -58.9 -48.7 0.4 3.3 3.1 31 44 A K H X S+ 0 0 77 -4,-1.6 4,-3.4 -5,-0.4 5,-0.3 0.964 115.3 46.9 -61.8 -54.3 0.5 5.1 6.5 32 45 A A H X S+ 0 0 41 -4,-2.8 4,-1.3 -5,-0.2 -1,-0.2 0.836 118.2 44.7 -56.8 -34.7 -1.3 2.4 8.4 33 46 A Y H X S+ 0 0 1 -4,-2.4 4,-3.4 -5,-0.2 5,-0.2 0.960 116.8 41.7 -74.7 -54.9 1.0 -0.2 6.7 34 47 A S H X>S+ 0 0 1 -4,-3.4 5,-2.4 1,-0.2 4,-1.9 0.887 118.4 47.8 -59.8 -41.2 4.3 1.7 7.2 35 48 A E H <5S+ 0 0 137 -4,-3.4 -1,-0.2 -5,-0.3 -2,-0.2 0.856 117.3 42.1 -68.5 -37.1 3.3 2.7 10.8 36 49 A R H <5S+ 0 0 203 -4,-1.3 -2,-0.2 -5,-0.3 -1,-0.2 0.870 117.9 46.0 -77.6 -39.7 2.2 -0.9 11.6 37 50 A Q H <5S- 0 0 66 -4,-3.4 -3,-0.2 -5,-0.1 -2,-0.2 0.993 117.1 -99.9 -67.1 -64.9 5.2 -2.6 9.9 38 51 A G T <5S+ 0 0 63 -4,-1.9 -3,-0.2 -5,-0.2 2,-0.2 0.501 76.5 111.0 141.4 47.0 8.0 -0.5 11.2 39 52 A L < - 0 0 44 -5,-2.4 2,-0.3 -6,-0.1 5,-0.1 -0.406 58.5 -98.4-122.2-161.4 9.1 2.1 8.6 40 53 A S > - 0 0 56 3,-0.4 3,-0.6 -2,-0.2 -2,-0.0 -0.793 18.9-122.7-123.6 166.9 9.0 5.9 8.1 41 54 A M T 3 S+ 0 0 97 -2,-0.3 3,-0.1 1,-0.2 -10,-0.0 0.056 107.6 56.9 -96.1 24.5 6.8 8.4 6.3 42 55 A R T 3 S+ 0 0 216 1,-0.1 -1,-0.2 0, 0.0 2,-0.0 0.197 105.7 44.3-136.7 12.9 9.8 9.7 4.3 43 56 A Q S < S+ 0 0 95 -3,-0.6 -3,-0.4 33,-0.0 2,-0.3 -0.454 76.4 120.0-160.8 78.1 11.1 6.6 2.6 44 57 A I - 0 0 29 -3,-0.1 2,-0.3 31,-0.1 30,-0.2 -0.965 30.2-173.6-141.9 156.9 8.5 4.3 1.1 45 58 A R E -C 73 0A 94 28,-1.2 28,-3.3 -2,-0.3 2,-0.5 -0.859 11.2-154.1-156.9 116.3 7.7 2.8 -2.4 46 59 A F E -CD 72 53A 3 7,-1.7 7,-3.5 -2,-0.3 2,-0.6 -0.818 10.9-158.4 -95.8 123.6 4.7 0.8 -3.4 47 60 A R E +CD 71 52A 108 24,-2.6 24,-2.5 -2,-0.5 2,-0.5 -0.899 12.1 178.5-106.5 117.9 5.1 -1.5 -6.4 48 61 A F S S- 0 0 44 3,-0.9 3,-0.3 -2,-0.6 22,-0.1 -0.906 75.9 -33.1-121.6 102.0 2.0 -2.7 -8.3 49 62 A D S S- 0 0 145 -2,-0.5 -1,-0.1 1,-0.2 21,-0.1 0.864 126.0 -46.1 56.9 38.7 2.7 -4.9 -11.3 50 63 A G S S+ 0 0 43 1,-0.1 -1,-0.2 0, 0.0 -3,-0.1 0.755 114.5 120.6 76.8 25.3 6.0 -3.0 -11.9 51 64 A Q - 0 0 123 -3,-0.3 -3,-0.9 2,-0.0 2,-0.2 -0.819 58.6-141.9-125.5 91.1 4.3 0.4 -11.5 52 65 A P E -D 47 0A 74 0, 0.0 2,-0.4 0, 0.0 -5,-0.2 -0.311 25.2-172.0 -54.2 115.8 5.9 2.5 -8.6 53 66 A I E -D 46 0A 19 -7,-3.5 -7,-1.7 -2,-0.2 2,-0.1 -0.921 12.2-141.0-117.5 140.9 3.0 4.3 -6.8 54 67 A N > - 0 0 115 -2,-0.4 3,-0.9 -9,-0.1 -28,-0.2 -0.369 33.1-101.6 -90.4 172.7 3.3 6.9 -4.1 55 68 A E T 3 S+ 0 0 53 1,-0.3 -28,-1.0 -11,-0.1 -27,-0.2 0.715 116.9 70.7 -66.8 -20.1 1.1 7.4 -1.0 56 69 A T T 3 S+ 0 0 107 -30,-0.2 -1,-0.3 -31,-0.1 2,-0.1 0.042 77.1 124.3 -85.9 28.1 -0.7 10.2 -2.9 57 70 A D < + 0 0 32 -3,-0.9 -31,-1.4 1,-0.1 -30,-0.4 -0.355 14.0 137.4 -84.3 168.0 -2.3 7.7 -5.2 58 71 A T > + 0 0 58 -33,-0.2 4,-2.6 -32,-0.1 5,-0.3 0.094 59.5 67.8-171.0 -57.8 -6.1 7.3 -5.9 59 72 A P H > S+ 0 0 90 0, 0.0 4,-2.0 0, 0.0 5,-0.1 0.901 109.4 41.9 -47.2 -50.3 -7.0 6.7 -9.6 60 73 A A H > S+ 0 0 34 1,-0.2 4,-1.4 2,-0.2 -3,-0.0 0.925 113.9 51.6 -65.0 -45.4 -5.3 3.3 -9.7 61 74 A Q H 4 S+ 0 0 1 1,-0.2 -1,-0.2 2,-0.2 -4,-0.0 0.821 111.6 48.7 -60.9 -31.7 -6.7 2.4 -6.3 62 75 A L H < S+ 0 0 87 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.860 103.2 60.1 -76.0 -37.2 -10.2 3.3 -7.5 63 76 A E H < S+ 0 0 171 -4,-2.0 -2,-0.2 -5,-0.3 -1,-0.2 0.832 94.1 84.0 -58.8 -33.9 -9.8 1.3 -10.7 64 77 A M < - 0 0 19 -4,-1.4 4,-0.1 1,-0.1 -60,-0.0 -0.084 66.0-154.1 -64.6 169.6 -9.4 -1.8 -8.6 65 78 A E - 0 0 135 2,-0.1 -1,-0.1 -60,-0.1 -43,-0.1 0.771 56.0 -74.0-111.7 -54.7 -12.3 -3.9 -7.2 66 79 A D S S+ 0 0 60 -62,-0.2 2,-1.2 -61,-0.1 -61,-0.4 0.122 108.5 79.2-175.0 -48.5 -11.0 -5.6 -4.1 67 80 A E + 0 0 127 -63,-0.1 2,-0.4 -61,-0.1 -61,-0.2 -0.677 61.6 138.8 -84.9 93.3 -8.7 -8.6 -4.9 68 81 A D E -b 6 0A 31 -2,-1.2 -61,-2.1 -63,-1.2 2,-0.4 -1.000 38.0-149.5-141.1 138.2 -5.4 -6.9 -5.6 69 82 A T E +b 7 0A 99 -2,-0.4 2,-0.3 -63,-0.2 -61,-0.2 -0.853 17.5 178.6-108.9 142.2 -1.8 -7.7 -4.7 70 83 A I E -b 8 0A 3 -63,-2.0 -61,-3.1 -2,-0.4 2,-0.4 -0.872 22.0-137.5-135.3 167.8 1.1 -5.3 -4.1 71 84 A D E -bC 9 47A 71 -24,-2.5 -24,-2.6 -2,-0.3 2,-0.5 -0.927 13.8-150.7-133.6 108.5 4.8 -5.3 -3.2 72 85 A V E +bC 10 46A 2 -63,-0.6 -61,-1.4 -2,-0.4 2,-0.3 -0.670 24.9 174.5 -82.1 121.9 6.1 -2.7 -0.7 73 86 A F E - C 0 45A 52 -28,-3.3 -28,-1.2 -2,-0.5 2,-0.5 -0.780 29.3-132.8-123.1 167.5 9.8 -1.8 -1.4 74 87 A Q + 0 0 74 -2,-0.3 2,-0.4 -30,-0.2 -30,-0.1 -0.883 39.7 147.2-126.1 99.1 12.3 0.6 0.0 75 88 A Q + 0 0 78 -2,-0.5 -31,-0.1 1,-0.1 -2,-0.1 -0.961 6.3 142.1-138.3 119.8 14.4 2.5 -2.6 76 89 A Q - 0 0 147 -2,-0.4 -1,-0.1 -33,-0.1 -32,-0.0 0.717 35.7-154.4-116.9 -53.1 15.7 6.1 -2.3 77 90 A T - 0 0 123 1,-0.1 2,-0.6 0, 0.0 -2,-0.0 0.934 7.9-148.5 69.6 96.1 19.2 6.2 -4.0 78 91 A G 0 0 80 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.859 360.0 360.0-101.3 121.2 21.3 9.0 -2.5 79 92 A G 0 0 125 -2,-0.6 0, 0.0 0, 0.0 0, 0.0 -0.842 360.0 360.0 104.8 360.0 23.9 10.6 -4.8