==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CHAPERONE 09-AUG-04 1U96 . COMPND 2 MOLECULE: CYTOCHROME C OXIDASE COPPER CHAPERONE; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR C.ABAJIAN,L.A.YATSUNYK,B.E.RAMIREZ,A.C.ROSENZWEIG . 69 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6910.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 27 39.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 21 30.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 242 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 118.4 -26.1 -6.2 -31.4 2 2 A T - 0 0 137 2,-0.0 2,-0.3 1,-0.0 0, 0.0 -0.257 360.0-152.6 -82.8 173.4 -25.2 -8.6 -28.6 3 3 A E - 0 0 143 1,-0.2 3,-0.1 -2,-0.1 -1,-0.0 -0.996 17.8-140.8-150.1 146.3 -21.7 -9.8 -27.7 4 4 A T S S- 0 0 122 -2,-0.3 2,-0.3 1,-0.3 -1,-0.2 0.992 82.3 -18.9 -68.9 -64.3 -20.1 -12.9 -26.1 5 5 A D + 0 0 121 1,-0.1 -1,-0.3 3,-0.0 3,-0.1 -0.997 65.9 134.1-149.3 145.0 -17.4 -11.3 -24.0 6 6 A K + 0 0 164 -2,-0.3 2,-0.3 1,-0.2 -1,-0.1 0.331 48.7 93.9-153.1 -51.0 -15.7 -7.9 -23.8 7 7 A K - 0 0 191 1,-0.1 2,-0.4 2,-0.0 -1,-0.2 -0.397 68.1-140.1 -60.5 119.5 -15.5 -6.5 -20.3 8 8 A Q - 0 0 154 -2,-0.3 -1,-0.1 1,-0.2 -3,-0.0 -0.679 13.0-164.0 -86.6 134.3 -12.1 -7.5 -18.8 9 9 A E - 0 0 172 -2,-0.4 -1,-0.2 2,-0.0 -2,-0.0 0.976 15.0-178.7 -78.2 -64.4 -12.1 -8.6 -15.2 10 10 A Q - 0 0 172 2,-0.0 2,-0.1 1,-0.0 -2,-0.0 0.922 12.9-153.5 59.7 100.8 -8.4 -8.5 -14.3 11 11 A E - 0 0 167 1,-0.1 2,-0.1 2,-0.0 3,-0.0 -0.408 15.5-100.6 -96.8 175.1 -7.8 -9.6 -10.7 12 12 A N - 0 0 96 -2,-0.1 -1,-0.1 2,-0.1 -2,-0.0 -0.411 27.2-113.4 -91.5 170.4 -5.0 -8.6 -8.3 13 13 A H S S- 0 0 206 -2,-0.1 -1,-0.1 2,-0.0 4,-0.1 0.998 88.3 -35.8 -66.0 -68.0 -1.9 -10.7 -7.3 14 14 A A S S- 0 0 83 1,-0.1 2,-0.3 2,-0.1 -2,-0.1 0.649 111.1 -34.0-122.4 -65.0 -2.7 -11.5 -3.7 15 15 A E S S+ 0 0 155 1,-0.3 -1,-0.1 2,-0.0 53,-0.1 -0.906 106.2 15.5-168.3 137.9 -4.5 -8.6 -1.9 16 16 A C - 0 0 44 -2,-0.3 -1,-0.3 1,-0.1 -2,-0.1 0.924 57.5-143.9 60.4 100.2 -4.5 -4.8 -1.9 17 17 A E - 0 0 146 50,-0.1 -1,-0.1 -3,-0.1 51,-0.1 0.864 37.0-176.5 -59.5 -37.5 -2.8 -3.5 -5.1 18 18 A D + 0 0 45 49,-0.1 47,-0.1 47,-0.0 -1,-0.0 0.138 39.0 87.9 60.5 175.8 -1.4 -0.6 -3.1 19 19 A K - 0 0 68 2,-0.1 46,-0.1 45,-0.0 -2,-0.0 0.920 50.8-164.0 62.1 100.4 0.6 2.3 -4.6 20 20 A P - 0 0 46 0, 0.0 45,-0.1 0, 0.0 -3,-0.0 0.975 69.4 -34.6 -75.1 -80.5 -1.7 5.1 -5.9 21 21 A K - 0 0 146 43,-0.2 -2,-0.1 0, 0.0 44,-0.0 -0.349 67.3-141.3-144.9 55.5 0.3 7.3 -8.2 22 22 A P - 0 0 50 0, 0.0 43,-0.0 0, 0.0 41,-0.0 0.159 27.1-163.7 -23.9 91.6 3.8 7.3 -6.8 23 23 A C > - 0 0 40 1,-0.1 3,-0.6 2,-0.0 40,-0.0 0.270 39.5 -78.0 -67.7-159.7 4.7 10.9 -7.4 24 24 A C T 3 S+ 0 0 125 1,-0.2 -1,-0.1 3,-0.1 3,-0.0 0.692 121.7 74.5 -79.7 -20.0 8.3 12.4 -7.3 25 25 A V T 3 S+ 0 0 76 1,-0.2 2,-0.5 2,-0.1 -1,-0.2 0.715 99.3 51.0 -65.5 -18.9 8.4 12.4 -3.5 26 26 A C S < S+ 0 0 2 -3,-0.6 -1,-0.2 1,-0.1 28,-0.0 -0.958 72.3 93.2-126.3 114.9 8.8 8.6 -3.7 27 27 A K S > S+ 0 0 138 -2,-0.5 4,-1.7 -3,-0.0 5,-0.1 0.272 73.8 57.2-161.0 -50.9 11.5 7.1 -5.9 28 28 A P H > S+ 0 0 82 0, 0.0 4,-2.0 0, 0.0 3,-0.4 0.964 109.0 46.3 -60.7 -55.5 14.8 6.4 -4.0 29 29 A E H > S+ 0 0 42 1,-0.2 4,-1.9 2,-0.2 5,-0.1 0.823 109.6 58.2 -57.1 -31.6 13.4 4.1 -1.3 30 30 A K H > S+ 0 0 41 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.916 106.2 46.5 -64.4 -44.1 11.4 2.3 -4.0 31 31 A E H X S+ 0 0 110 -4,-1.7 4,-2.2 -3,-0.4 -2,-0.2 0.846 110.5 54.0 -66.4 -34.8 14.6 1.4 -5.8 32 32 A E H X S+ 0 0 115 -4,-2.0 4,-1.9 2,-0.2 -1,-0.2 0.868 109.1 48.6 -67.1 -37.1 16.2 0.3 -2.5 33 33 A R H X S+ 0 0 75 -4,-1.9 4,-2.2 2,-0.2 -2,-0.2 0.920 111.6 48.2 -69.0 -45.7 13.3 -2.0 -1.9 34 34 A D H X S+ 0 0 86 -4,-2.2 4,-1.6 1,-0.2 -2,-0.2 0.915 113.3 47.9 -61.4 -44.2 13.4 -3.6 -5.4 35 35 A T H X S+ 0 0 56 -4,-2.2 4,-2.4 2,-0.2 5,-0.3 0.893 109.8 53.2 -63.9 -40.6 17.1 -4.1 -5.1 36 36 A C H X S+ 0 0 23 -4,-1.9 4,-2.1 1,-0.2 5,-0.5 0.911 113.1 42.6 -61.3 -43.9 16.8 -5.6 -1.7 37 37 A I H < S+ 0 0 57 -4,-2.2 4,-0.3 3,-0.2 -1,-0.2 0.750 111.8 57.6 -74.4 -24.4 14.2 -8.1 -2.9 38 38 A L H < S+ 0 0 121 -4,-1.6 -2,-0.2 -5,-0.2 -1,-0.2 0.955 116.3 30.4 -70.9 -52.4 16.3 -8.8 -6.1 39 39 A F H < S+ 0 0 174 -4,-2.4 -2,-0.2 -5,-0.1 -3,-0.2 0.899 131.9 35.8 -74.6 -42.6 19.5 -9.9 -4.3 40 40 A N S < S- 0 0 78 -4,-2.1 -3,-0.2 -5,-0.3 -2,-0.1 0.986 97.0-131.5 -74.8 -64.3 17.8 -11.4 -1.3 41 41 A G - 0 0 36 -5,-0.5 -4,-0.2 -4,-0.3 -3,-0.1 0.586 47.3 -84.8 117.8 20.1 14.6 -12.9 -2.8 42 42 A Q S S+ 0 0 126 -6,-0.3 4,-0.4 1,-0.1 6,-0.1 0.357 113.3 104.6 65.3 -7.9 12.0 -11.5 -0.4 43 43 A D + 0 0 116 -6,-0.2 2,-0.7 2,-0.1 -1,-0.1 0.352 57.3 90.2 -83.1 7.0 12.9 -14.6 1.7 44 44 A S S > S- 0 0 56 1,-0.1 3,-2.0 -8,-0.1 -2,-0.1 -0.866 122.1 -39.0-109.6 100.3 14.8 -12.3 4.0 45 45 A E G > S- 0 0 152 -2,-0.7 3,-1.7 1,-0.3 4,-0.3 0.691 97.8 -85.1 58.5 17.7 12.6 -11.0 6.9 46 46 A K G 3 - 0 0 149 -4,-0.4 -1,-0.3 1,-0.3 -3,-0.1 0.568 59.1 -97.2 61.9 7.3 9.9 -10.8 4.1 47 47 A C G <> S+ 0 0 7 -3,-2.0 4,-1.0 1,-0.1 3,-0.5 0.751 87.2 139.0 54.2 24.4 11.4 -7.4 3.4 48 48 A K H <> + 0 0 127 -3,-1.7 4,-2.4 1,-0.2 5,-0.2 0.697 55.0 74.2 -70.5 -18.7 8.6 -6.0 5.6 49 49 A E H > S+ 0 0 106 -4,-0.3 4,-2.4 1,-0.2 -1,-0.2 0.929 98.4 43.2 -59.7 -47.5 11.1 -3.6 7.1 50 50 A F H > S+ 0 0 73 -3,-0.5 4,-2.0 1,-0.2 -1,-0.2 0.831 111.4 56.6 -68.1 -32.8 11.2 -1.4 3.9 51 51 A I H X S+ 0 0 79 -4,-1.0 4,-2.5 2,-0.2 -2,-0.2 0.914 111.3 41.7 -64.8 -44.4 7.4 -1.7 3.7 52 52 A E H X S+ 0 0 84 -4,-2.4 4,-2.3 2,-0.2 5,-0.2 0.935 114.0 50.6 -69.1 -48.3 6.9 -0.3 7.2 53 53 A K H X S+ 0 0 115 -4,-2.4 4,-1.7 -5,-0.2 -2,-0.2 0.869 114.1 47.5 -57.5 -37.4 9.5 2.4 6.8 54 54 A Y H X S+ 0 0 35 -4,-2.0 4,-1.7 2,-0.2 3,-0.4 0.974 112.5 45.4 -67.6 -56.6 7.9 3.5 3.6 55 55 A K H X S+ 0 0 90 -4,-2.5 4,-2.0 1,-0.2 -2,-0.2 0.787 115.3 51.6 -57.8 -27.7 4.3 3.5 4.9 56 56 A E H X S+ 0 0 111 -4,-2.3 4,-0.5 2,-0.2 -1,-0.2 0.829 111.4 44.4 -78.9 -34.8 5.7 5.4 7.9 57 57 A C H < S+ 0 0 82 -4,-1.7 -2,-0.2 -3,-0.4 -1,-0.2 0.626 120.8 41.4 -84.5 -14.4 7.5 8.0 5.8 58 58 A M H X>S+ 0 0 8 -4,-1.7 5,-1.3 4,-0.2 4,-1.1 0.810 107.1 55.9-101.0 -39.2 4.6 8.5 3.5 59 59 A K H <5S+ 0 0 141 -4,-2.0 2,-0.8 -5,-0.3 -3,-0.1 0.729 101.0 69.1 -67.2 -20.1 1.6 8.5 5.8 60 60 A G T <5S- 0 0 24 -4,-0.5 -1,-0.2 1,-0.2 4,-0.1 -0.821 136.8 -45.9-105.8 97.7 3.2 11.3 7.7 61 61 A Y T 45S+ 0 0 246 -2,-0.8 -1,-0.2 2,-0.1 -2,-0.1 0.687 116.3 111.6 55.6 17.7 3.2 14.5 5.7 62 62 A G T <5S- 0 0 26 -4,-1.1 -3,-0.2 -7,-0.1 -4,-0.2 0.878 82.5 -83.6 -82.9 -94.5 4.4 12.3 2.9 63 63 A F < - 0 0 79 -5,-1.3 2,-0.3 -38,-0.0 -2,-0.1 0.213 65.3 -57.2-141.6 -90.9 2.0 11.8 -0.0 64 64 A E - 0 0 98 -4,-0.1 -43,-0.2 -3,-0.0 -5,-0.1 -0.897 35.4-170.6-171.5 139.7 -0.8 9.2 -0.0 65 65 A V - 0 0 41 -2,-0.3 -47,-0.0 1,-0.2 -10,-0.0 -0.985 12.4-158.5-140.4 126.8 -1.3 5.4 0.4 66 66 A P + 0 0 56 0, 0.0 -1,-0.2 0, 0.0 -50,-0.0 0.981 35.2 160.6 -65.5 -59.3 -4.4 3.3 -0.2 67 67 A S - 0 0 53 1,-0.1 -49,-0.1 2,-0.1 -50,-0.1 0.074 52.7-102.4 60.3-178.1 -3.5 0.3 1.9 68 68 A A 0 0 69 1,-0.2 -1,-0.1 -52,-0.1 -52,-0.1 0.495 360.0 360.0-116.3 -13.1 -6.1 -2.2 3.2 69 69 A N 0 0 214 -3,-0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.391 360.0 360.0 57.7 360.0 -6.3 -1.0 6.8