==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-NOV-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 03-APR-03 1UB9 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN PH1061; . SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; . AUTHOR U.OKADA,N.SAKAI,Y.TAJIKA,M.YAO,N.WATANABE,I.TANAKA . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6766.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 78 78.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 11.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 52 52.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M > 0 0 155 0, 0.0 4,-1.7 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -27.0 30.0 36.5 15.3 2 2 A E H > + 0 0 154 1,-0.2 4,-1.1 2,-0.2 0, 0.0 0.877 360.0 44.4 -69.0 -38.1 32.9 34.2 16.1 3 3 A E H > S+ 0 0 103 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.829 108.4 59.0 -76.1 -29.9 33.1 32.6 12.6 4 4 A L H > S+ 0 0 71 1,-0.2 4,-2.4 2,-0.2 -2,-0.2 0.941 105.1 49.1 -63.0 -45.8 32.7 36.0 10.9 5 5 A K H X S+ 0 0 122 -4,-1.7 4,-1.6 1,-0.2 -1,-0.2 0.835 105.5 59.3 -61.7 -33.4 35.9 37.2 12.6 6 6 A E H < S+ 0 0 110 -4,-1.1 4,-0.3 2,-0.2 -1,-0.2 0.936 109.9 41.6 -61.5 -46.2 37.7 34.1 11.6 7 7 A I H >< S+ 0 0 27 -4,-1.8 3,-1.6 1,-0.2 -2,-0.2 0.914 111.2 56.6 -67.3 -42.6 37.0 34.9 7.9 8 8 A M H 3< S+ 0 0 140 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.767 104.1 54.2 -60.6 -28.3 37.8 38.6 8.4 9 9 A K T 3< S+ 0 0 162 -4,-1.6 2,-1.9 -3,-0.2 -1,-0.3 0.468 78.3 99.2 -87.7 -1.8 41.3 37.8 9.8 10 10 A S <> + 0 0 36 -3,-1.6 4,-2.0 -4,-0.3 5,-0.2 -0.525 41.2 159.7 -85.2 73.9 42.3 35.6 6.8 11 11 A H H > S+ 0 0 138 -2,-1.9 4,-0.5 3,-0.2 -1,-0.2 0.753 71.2 45.5 -68.2 -25.5 44.4 38.4 5.1 12 12 A I H 4 S+ 0 0 25 -3,-0.2 3,-0.4 2,-0.1 6,-0.2 0.967 126.0 25.1 -81.1 -62.2 46.4 35.9 3.0 13 13 A L H 4 S+ 0 0 13 1,-0.2 -2,-0.2 5,-0.1 9,-0.1 0.732 116.1 66.3 -74.9 -22.7 43.7 33.6 1.7 14 14 A G H < S+ 0 0 28 -4,-2.0 -1,-0.2 4,-0.1 -3,-0.2 0.802 71.3 104.6 -69.5 -32.6 40.9 36.2 2.0 15 15 A N S X S- 0 0 44 -4,-0.5 4,-2.7 -3,-0.4 5,-0.2 -0.288 76.9-130.5 -51.4 128.8 42.3 38.5 -0.7 16 16 A P H > S+ 0 0 104 0, 0.0 4,-1.7 0, 0.0 -1,-0.1 0.820 103.8 47.9 -54.8 -36.9 40.1 38.0 -3.8 17 17 A V H > S+ 0 0 44 2,-0.2 4,-2.2 1,-0.2 5,-0.2 0.957 114.4 44.0 -71.7 -49.8 43.0 37.5 -6.2 18 18 A R H > S+ 0 0 42 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.890 112.6 53.6 -60.7 -40.8 44.9 35.0 -4.0 19 19 A L H X S+ 0 0 28 -4,-2.7 4,-2.4 1,-0.2 -1,-0.2 0.908 108.9 49.0 -60.1 -44.4 41.6 33.1 -3.3 20 20 A G H X S+ 0 0 30 -4,-1.7 4,-2.3 -5,-0.2 -1,-0.2 0.880 109.7 51.5 -63.3 -40.0 40.9 32.8 -7.0 21 21 A I H X S+ 0 0 0 -4,-2.2 4,-1.9 2,-0.2 -1,-0.2 0.888 112.2 46.6 -63.5 -40.0 44.4 31.5 -7.6 22 22 A M H X S+ 0 0 0 -4,-2.3 4,-1.8 2,-0.2 -2,-0.2 0.874 112.1 49.5 -71.1 -37.2 44.0 28.9 -4.9 23 23 A I H < S+ 0 0 80 -4,-2.4 -2,-0.2 2,-0.2 -1,-0.2 0.878 109.8 53.3 -67.9 -36.0 40.6 27.9 -6.2 24 24 A F H X S+ 0 0 23 -4,-2.3 4,-0.5 1,-0.2 -2,-0.2 0.924 114.5 40.7 -62.2 -44.9 42.1 27.6 -9.7 25 25 A L H X S+ 0 0 0 -4,-1.9 4,-3.3 1,-0.2 -1,-0.2 0.714 93.5 84.3 -77.9 -23.9 44.8 25.3 -8.4 26 26 A L H < S+ 0 0 35 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.1 0.891 103.7 28.5 -48.2 -50.1 42.6 23.2 -6.1 27 27 A P H 4 S+ 0 0 105 0, 0.0 -1,-0.2 0, 0.0 -2,-0.2 0.670 128.4 43.7 -87.0 -15.9 41.4 20.8 -8.9 28 28 A R H < S- 0 0 138 -4,-0.5 2,-2.3 -3,-0.2 -2,-0.2 0.629 81.4-154.4-104.0 -16.1 44.5 21.2 -11.1 29 29 A R S < S+ 0 0 75 -4,-3.3 47,-2.6 48,-0.1 2,-0.3 -0.195 70.8 14.6 70.1 -46.8 47.4 20.9 -8.5 30 30 A K E +A 75 0A 108 -2,-2.3 45,-0.2 45,-0.2 43,-0.0 -0.996 58.8 172.2-155.8 157.4 49.7 22.9 -10.8 31 31 A A E -A 74 0A 7 43,-2.2 43,-3.1 -2,-0.3 2,-0.1 -0.981 41.7 -88.3-162.5 153.3 50.0 25.1 -13.8 32 32 A P E >> -A 73 0A 22 0, 0.0 4,-2.0 0, 0.0 3,-0.7 -0.429 36.3-123.2 -66.8 144.7 52.5 27.3 -15.7 33 33 A F H 3> S+ 0 0 39 39,-3.4 4,-2.5 1,-0.3 5,-0.2 0.910 113.0 56.5 -51.2 -45.4 52.7 30.9 -14.4 34 34 A S H 3> S+ 0 0 54 38,-0.4 4,-1.7 1,-0.2 -1,-0.3 0.822 105.5 49.3 -60.1 -34.4 51.9 32.0 -18.0 35 35 A Q H <> S+ 0 0 108 -3,-0.7 4,-3.2 2,-0.2 5,-0.3 0.940 111.2 48.2 -70.8 -46.9 48.6 30.0 -18.1 36 36 A I H X S+ 0 0 0 -4,-2.0 4,-2.3 1,-0.2 6,-0.2 0.933 110.8 53.1 -56.6 -47.2 47.4 31.3 -14.7 37 37 A Q H <>S+ 0 0 47 -4,-2.5 5,-2.6 -5,-0.2 -1,-0.2 0.903 116.2 38.3 -54.9 -47.2 48.3 34.9 -15.8 38 38 A K H ><5S+ 0 0 159 -4,-1.7 3,-1.1 3,-0.2 -2,-0.2 0.934 117.1 46.2 -73.8 -49.0 46.3 34.5 -19.1 39 39 A V H 3<5S+ 0 0 91 -4,-3.2 -2,-0.2 1,-0.2 -3,-0.2 0.870 118.2 42.2 -66.1 -35.4 43.2 32.5 -17.9 40 40 A L T 3<5S- 0 0 58 -4,-2.3 -1,-0.2 -5,-0.3 -2,-0.2 0.309 108.9-124.6 -93.2 9.9 42.6 34.6 -14.8 41 41 A D T < 5 + 0 0 147 -3,-1.1 2,-0.3 1,-0.2 -3,-0.2 0.912 58.6 146.3 46.1 57.8 43.3 37.9 -16.7 42 42 A L < - 0 0 31 -5,-2.6 -1,-0.2 -6,-0.2 -2,-0.1 -0.881 52.0-112.3-119.5 151.1 46.0 39.1 -14.4 43 43 A T > - 0 0 74 -2,-0.3 4,-2.4 1,-0.1 5,-0.3 -0.520 29.1-117.8 -78.8 151.6 49.1 41.1 -15.3 44 44 A P H > S+ 0 0 72 0, 0.0 4,-2.3 0, 0.0 5,-0.1 0.873 114.5 54.5 -57.1 -34.7 52.4 39.3 -14.8 45 45 A G H > S+ 0 0 46 2,-0.2 4,-1.7 1,-0.2 5,-0.1 0.900 110.2 41.7 -66.5 -45.5 53.4 41.8 -12.2 46 46 A N H > S+ 0 0 92 2,-0.2 4,-2.3 1,-0.2 5,-0.2 0.917 115.2 50.7 -69.2 -43.4 50.3 41.4 -10.0 47 47 A L H X S+ 0 0 0 -4,-2.4 4,-2.8 1,-0.2 5,-0.2 0.944 108.4 53.7 -58.0 -48.1 50.3 37.7 -10.3 48 48 A D H X S+ 0 0 67 -4,-2.3 4,-2.0 -5,-0.3 -1,-0.2 0.908 109.0 47.7 -53.6 -47.3 54.0 37.6 -9.3 49 49 A S H X S+ 0 0 50 -4,-1.7 4,-1.7 1,-0.2 -1,-0.2 0.908 113.2 47.1 -63.8 -43.1 53.4 39.6 -6.1 50 50 A H H X S+ 0 0 23 -4,-2.3 4,-2.3 1,-0.2 -1,-0.2 0.887 109.8 54.0 -65.9 -38.0 50.5 37.4 -5.0 51 51 A I H X S+ 0 0 7 -4,-2.8 4,-2.8 1,-0.2 -1,-0.2 0.896 106.6 52.4 -62.3 -40.5 52.4 34.3 -5.8 52 52 A R H X S+ 0 0 117 -4,-2.0 4,-2.4 -5,-0.2 -1,-0.2 0.908 108.9 49.2 -62.2 -43.7 55.3 35.5 -3.5 53 53 A V H X S+ 0 0 18 -4,-1.7 4,-0.9 1,-0.2 -2,-0.2 0.936 113.7 46.7 -61.1 -46.7 52.9 36.1 -0.6 54 54 A L H <>S+ 0 0 0 -4,-2.3 5,-2.5 1,-0.2 6,-0.6 0.901 113.6 47.6 -63.4 -41.8 51.3 32.7 -1.1 55 55 A E H ><5S+ 0 0 71 -4,-2.8 3,-1.9 1,-0.2 -1,-0.2 0.868 105.4 57.4 -70.7 -35.6 54.7 30.9 -1.3 56 56 A R H 3<5S+ 0 0 173 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.763 110.0 47.9 -64.8 -22.7 56.2 32.7 1.8 57 57 A N T 3<5S- 0 0 75 -4,-0.9 -1,-0.3 -3,-0.4 -2,-0.2 0.189 117.2-114.9-102.6 16.0 53.2 31.3 3.7 58 58 A G T < 5S+ 0 0 34 -3,-1.9 22,-0.5 2,-0.2 21,-0.2 0.648 82.5 120.2 61.8 20.7 53.7 27.8 2.3 59 59 A L S - 0 0 19 -18,-1.8 4,-2.6 -2,-0.3 5,-0.2 -0.417 22.1-107.5 -86.7 167.8 51.0 22.5 -1.6 78 78 A D H > S+ 0 0 108 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.894 125.3 49.0 -61.2 -38.3 49.3 19.9 0.5 79 79 A F H > S+ 0 0 103 -21,-0.2 4,-2.9 2,-0.2 5,-0.3 0.934 108.8 53.5 -65.3 -45.3 49.0 22.5 3.2 80 80 A G H > S+ 0 0 0 -22,-0.5 4,-2.5 1,-0.2 5,-0.2 0.921 107.4 51.0 -55.2 -46.1 47.7 25.0 0.7 81 81 A M H X S+ 0 0 36 -4,-2.6 4,-2.0 1,-0.2 -1,-0.2 0.923 113.8 43.8 -58.9 -45.8 45.0 22.6 -0.4 82 82 A E H X S+ 0 0 107 -4,-2.0 4,-2.5 2,-0.2 -2,-0.2 0.903 113.5 49.5 -68.2 -41.6 43.8 22.0 3.2 83 83 A E H X S+ 0 0 59 -4,-2.9 4,-2.8 2,-0.2 5,-0.2 0.915 111.7 49.8 -62.9 -43.5 44.0 25.7 4.3 84 84 A A H X S+ 0 0 2 -4,-2.5 4,-3.1 -5,-0.3 5,-0.2 0.920 111.5 48.4 -61.4 -45.1 42.0 26.7 1.2 85 85 A K H X S+ 0 0 103 -4,-2.0 4,-2.2 -5,-0.2 -2,-0.2 0.907 111.7 49.8 -62.3 -42.4 39.4 24.0 2.0 86 86 A R H X S+ 0 0 124 -4,-2.5 4,-2.2 2,-0.2 -2,-0.2 0.945 114.3 44.4 -60.9 -49.6 39.1 25.1 5.6 87 87 A F H X S+ 0 0 15 -4,-2.8 4,-2.3 1,-0.2 -2,-0.2 0.915 113.6 49.7 -62.3 -43.2 38.7 28.7 4.6 88 88 A L H X S+ 0 0 52 -4,-3.1 4,-2.0 1,-0.2 -1,-0.2 0.843 110.8 51.0 -65.5 -32.0 36.2 27.9 1.9 89 89 A S H X S+ 0 0 76 -4,-2.2 4,-2.1 2,-0.2 -1,-0.2 0.883 109.5 49.1 -71.4 -39.5 34.2 25.8 4.3 90 90 A S H X S+ 0 0 26 -4,-2.2 4,-1.9 2,-0.2 -2,-0.2 0.907 112.3 49.3 -65.1 -41.4 34.1 28.6 6.9 91 91 A L H X S+ 0 0 48 -4,-2.3 4,-2.4 1,-0.2 -2,-0.2 0.891 109.6 51.4 -63.5 -42.3 32.9 31.0 4.2 92 92 A K H X S+ 0 0 133 -4,-2.0 4,-2.7 1,-0.2 -1,-0.2 0.900 108.5 51.7 -62.7 -41.7 30.3 28.5 3.1 93 93 A A H X S+ 0 0 58 -4,-2.1 4,-1.4 2,-0.2 -1,-0.2 0.897 110.0 48.5 -63.4 -41.9 29.0 28.2 6.6 94 94 A V H X S+ 0 0 36 -4,-1.9 4,-0.8 2,-0.2 3,-0.3 0.945 112.9 48.0 -64.5 -46.5 28.7 32.0 7.0 95 95 A I H >X S+ 0 0 83 -4,-2.4 3,-1.3 1,-0.2 4,-0.7 0.924 108.3 54.1 -60.2 -45.5 26.8 32.3 3.7 96 96 A D H >< S+ 0 0 95 -4,-2.7 3,-0.6 1,-0.3 -1,-0.2 0.827 103.7 57.1 -59.1 -32.5 24.4 29.4 4.5 97 97 A G H 3< S+ 0 0 66 -4,-1.4 -1,-0.3 -3,-0.3 -2,-0.2 0.723 97.9 63.0 -72.0 -19.2 23.5 31.2 7.8 98 98 A L H << S- 0 0 112 -3,-1.3 -1,-0.2 -4,-0.8 -2,-0.2 0.737 95.7-138.7 -77.5 -24.4 22.4 34.3 5.9 99 99 A D << 0 0 145 -4,-0.7 -3,-0.1 -3,-0.6 -2,-0.1 0.988 360.0 360.0 61.4 82.8 19.6 32.7 3.9 100 100 A L 0 0 195 -5,-0.2 -1,-0.1 -4,-0.1 -5,-0.0 -0.562 360.0 360.0-108.2 360.0 19.9 34.1 0.4