==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ENDOCYTOSIS/EXOCYTOSIS 01-MAY-03 1UDL . COMPND 2 MOLECULE: INTERSECTIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.GORONCY,T.KIGAWA,S.KOSHIBA,N.KOBAYASHI,N.TOCHIO,M.INOUE, . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8121.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 41.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 16.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 140 0, 0.0 2,-0.3 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 -63.8 -1.9 16.6 12.8 2 2 A S - 0 0 114 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.848 360.0 -59.5-139.2 174.3 -4.0 18.9 10.7 3 3 A S + 0 0 115 -2,-0.3 3,-0.1 1,-0.2 0, 0.0 -0.398 46.0 179.5 -60.3 117.1 -5.1 19.4 7.1 4 4 A G + 0 0 83 -2,-0.3 2,-0.4 1,-0.3 -1,-0.2 0.895 66.6 28.0 -86.7 -45.5 -1.9 19.9 5.1 5 5 A S + 0 0 80 1,-0.1 -1,-0.3 2,-0.1 0, 0.0 -0.955 52.5 155.2-122.7 138.9 -3.5 20.4 1.6 6 6 A S S S+ 0 0 114 -2,-0.4 -1,-0.1 -3,-0.1 -2,-0.0 0.642 75.6 48.6-124.6 -47.6 -6.9 21.8 0.7 7 7 A G S S+ 0 0 62 1,-0.1 2,-0.6 2,-0.0 -2,-0.1 0.939 104.8 62.9 -63.7 -48.9 -6.7 23.2 -2.8 8 8 A Q + 0 0 153 1,-0.1 3,-0.2 2,-0.0 -1,-0.1 -0.702 56.3 173.5 -84.0 119.9 -5.0 20.1 -4.3 9 9 A K + 0 0 165 -2,-0.6 -1,-0.1 1,-0.1 -2,-0.0 -0.255 26.0 138.3-118.6 43.8 -7.2 17.0 -4.1 10 10 A G S S+ 0 0 59 1,-0.1 2,-0.4 2,-0.0 -1,-0.1 0.949 70.4 39.6 -52.1 -57.1 -5.0 14.6 -6.1 11 11 A W S S- 0 0 81 -3,-0.2 -1,-0.1 55,-0.0 0, 0.0 -0.834 73.3-170.6-101.1 132.8 -5.6 11.7 -3.7 12 12 A F - 0 0 118 -2,-0.4 53,-0.1 1,-0.0 -3,-0.0 -0.967 17.7-125.6-125.8 138.5 -9.0 11.0 -2.2 13 13 A P - 0 0 93 0, 0.0 50,-0.1 0, 0.0 -1,-0.0 -0.050 9.1-136.4 -69.7 176.4 -9.9 8.6 0.6 14 14 A A + 0 0 73 48,-0.1 2,-0.5 2,-0.0 50,-0.0 -0.150 60.1 120.2-129.4 37.8 -12.7 5.9 0.4 15 15 A S - 0 0 105 48,-0.0 2,-0.5 2,-0.0 48,-0.0 -0.910 47.6-152.5-109.7 128.7 -14.3 6.3 3.8 16 16 A H - 0 0 156 -2,-0.5 2,-0.6 2,-0.0 -2,-0.0 -0.870 6.3-160.0-102.9 125.3 -18.0 7.3 4.1 17 17 A V + 0 0 103 -2,-0.5 -2,-0.0 1,-0.1 0, 0.0 -0.910 20.4 166.5-108.5 119.3 -19.1 9.1 7.2 18 18 A K + 0 0 160 -2,-0.6 2,-0.4 2,-0.1 -1,-0.1 -0.079 34.3 129.6-118.6 31.6 -22.8 9.0 8.1 19 19 A L - 0 0 118 2,-0.1 2,-0.5 4,-0.0 4,-0.1 -0.733 44.3-151.3 -91.5 134.7 -22.5 10.4 11.7 20 20 A L + 0 0 166 -2,-0.4 -2,-0.1 2,-0.1 0, 0.0 -0.904 57.2 4.9-108.9 129.4 -24.8 13.3 12.8 21 21 A G S S+ 0 0 55 -2,-0.5 2,-1.2 2,-0.1 -2,-0.1 -0.671 116.2 1.3 104.9-160.4 -23.7 15.7 15.4 22 22 A P - 0 0 132 0, 0.0 2,-1.3 0, 0.0 -2,-0.1 -0.517 63.5-171.1 -69.8 95.1 -20.4 16.1 17.3 23 23 A S + 0 0 79 -2,-1.2 2,-0.4 -4,-0.1 -2,-0.1 -0.685 27.6 142.5 -92.2 86.0 -18.2 13.4 15.8 24 24 A S + 0 0 118 -2,-1.3 2,-0.4 2,-0.0 -1,-0.1 -0.757 14.8 152.0-128.6 85.6 -15.2 13.4 18.1 25 25 A E - 0 0 150 -2,-0.4 3,-0.2 3,-0.0 -2,-0.0 -0.952 43.5-117.1-119.2 133.9 -13.8 9.9 18.7 26 26 A R - 0 0 196 -2,-0.4 -2,-0.0 1,-0.2 0, 0.0 -0.313 58.3 -65.7 -65.4 147.4 -10.2 8.9 19.4 27 27 A A - 0 0 84 1,-0.1 -1,-0.2 2,-0.1 0, 0.0 0.002 61.9-119.9 -34.6 122.6 -8.4 6.7 16.9 28 28 A T - 0 0 98 -3,-0.2 -1,-0.1 1,-0.1 -3,-0.0 -0.476 6.4-140.3 -74.1 139.9 -10.2 3.3 17.0 29 29 A P S S+ 0 0 131 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 0.753 87.4 67.9 -69.7 -25.1 -8.2 0.3 18.0 30 30 A A + 0 0 77 2,-0.0 2,-0.4 0, 0.0 -2,-0.1 -0.847 64.9 179.9-102.3 131.9 -9.9 -1.8 15.4 31 31 A F - 0 0 95 -2,-0.5 31,-0.0 0, 0.0 0, 0.0 -0.979 21.2-148.4-132.5 144.3 -9.4 -1.2 11.7 32 32 A H - 0 0 179 -2,-0.4 -2,-0.0 30,-0.0 0, 0.0 -0.844 22.9-168.8-115.6 95.1 -10.8 -2.8 8.5 33 33 A P - 0 0 49 0, 0.0 29,-0.3 0, 0.0 3,-0.1 0.019 26.1-126.3 -69.7-178.2 -8.3 -2.7 5.7 34 34 A V S S- 0 0 85 27,-2.8 2,-0.3 1,-0.4 28,-0.2 0.727 78.0 -25.2-102.4 -31.6 -9.0 -3.5 2.0 35 35 A C E -A 61 0A 51 26,-2.0 26,-0.6 2,-0.0 2,-0.4 -0.977 57.3-112.7-170.6 171.2 -6.2 -6.1 1.5 36 36 A Q E +A 60 0A 65 -2,-0.3 53,-1.5 24,-0.2 54,-0.7 -0.978 32.9 170.6-124.6 129.2 -2.8 -7.3 2.6 37 37 A V E -AB 59 88A 1 22,-2.5 22,-1.2 -2,-0.4 2,-0.4 -0.829 23.8-128.8-130.3 169.0 0.4 -7.1 0.5 38 38 A I E -AB 58 87A 64 49,-1.2 49,-2.2 -2,-0.3 2,-0.1 -0.953 29.5-105.2-123.7 141.4 4.1 -7.7 1.0 39 39 A A E - B 0 86A 3 18,-0.9 17,-1.2 -2,-0.4 47,-0.3 -0.402 23.3-166.4 -63.9 131.4 7.1 -5.4 0.2 40 40 A M S S+ 0 0 43 45,-1.5 2,-0.3 1,-0.3 -1,-0.2 0.747 75.1 18.7 -89.3 -27.8 9.0 -6.6 -2.9 41 41 A Y S S- 0 0 112 44,-0.5 2,-0.3 13,-0.1 -1,-0.3 -0.996 95.7 -89.6-147.3 138.9 12.0 -4.3 -2.3 42 42 A D - 0 0 113 -2,-0.3 2,-0.5 -3,-0.1 12,-0.3 -0.239 49.2-156.8 -48.5 103.0 13.3 -2.4 0.7 43 43 A Y - 0 0 28 10,-0.5 10,-2.4 -2,-0.3 2,-0.6 -0.757 7.4-161.6 -91.7 129.1 11.5 0.9 0.3 44 44 A A - 0 0 75 -2,-0.5 2,-0.3 8,-0.2 8,-0.2 -0.914 19.2-130.9-114.8 107.9 13.1 3.9 1.9 45 45 A A - 0 0 23 -2,-0.6 7,-0.1 1,-0.2 36,-0.0 -0.371 8.6-150.6 -58.0 114.7 10.7 6.9 2.5 46 46 A N S S- 0 0 138 -2,-0.3 2,-0.3 5,-0.1 -1,-0.2 0.761 78.9 -0.3 -58.5 -24.5 12.6 9.9 1.1 47 47 A N S > S- 0 0 68 0, 0.0 3,-0.9 0, 0.0 5,-0.0 -0.862 90.3 -82.4-151.0-176.7 10.7 11.9 3.7 48 48 A E T 3 S+ 0 0 172 -2,-0.3 4,-0.1 1,-0.2 -2,-0.0 0.609 119.9 69.3 -70.6 -10.9 8.1 11.7 6.5 49 49 A D T 3 S+ 0 0 108 30,-0.1 -1,-0.2 2,-0.1 2,-0.1 0.818 98.2 54.8 -76.0 -32.0 5.4 11.8 3.7 50 50 A E S < S- 0 0 43 -3,-0.9 2,-0.5 29,-0.2 31,-0.2 -0.423 91.1-106.0 -96.4 173.8 6.4 8.3 2.5 51 51 A L - 0 0 5 29,-1.4 2,-0.7 -2,-0.1 -5,-0.1 -0.898 22.9-147.8-106.9 125.6 6.6 5.0 4.4 52 52 A S + 0 0 88 -2,-0.5 2,-0.3 -8,-0.2 -8,-0.2 -0.815 37.7 141.2 -95.4 112.7 10.0 3.6 5.2 53 53 A F - 0 0 14 -10,-2.4 -10,-0.5 -2,-0.7 2,-0.2 -0.905 38.6-125.1-143.2 170.1 10.0 -0.2 5.2 54 54 A S > - 0 0 62 -2,-0.3 3,-1.3 -12,-0.3 2,-0.3 -0.541 47.7 -64.8-111.5 178.6 12.1 -3.2 4.2 55 55 A K T 3 S+ 0 0 145 1,-0.3 -15,-0.2 -2,-0.2 -1,-0.1 -0.481 122.4 17.7 -67.5 125.1 11.6 -6.3 2.0 56 56 A G T 3 S+ 0 0 45 -17,-1.2 -1,-0.3 -2,-0.3 2,-0.1 0.742 89.7 158.2 85.9 24.9 8.9 -8.6 3.4 57 57 A Q < - 0 0 62 -3,-1.3 2,-1.0 1,-0.1 -18,-0.9 -0.473 52.0-100.4 -82.0 153.9 7.4 -5.9 5.7 58 58 A L E +A 38 0A 88 -2,-0.1 2,-0.5 -20,-0.1 -20,-0.1 -0.631 50.8 169.8 -77.7 102.7 3.9 -6.1 7.0 59 59 A I E -A 37 0A 0 -22,-1.2 -22,-2.5 -2,-1.0 2,-0.8 -0.956 17.3-167.7-121.0 116.5 1.8 -3.8 4.8 60 60 A N E -A 36 0A 22 13,-1.0 -24,-0.2 -2,-0.5 2,-0.1 -0.855 21.1-136.5-106.0 101.4 -2.0 -3.7 5.0 61 61 A V E +A 35 0A 2 -2,-0.8 -27,-2.8 -26,-0.6 -26,-2.0 -0.343 32.1 166.3 -57.5 123.2 -3.5 -1.8 2.1 62 62 A M + 0 0 65 9,-3.2 2,-0.4 1,-0.3 -1,-0.2 0.734 69.7 23.5-107.9 -37.4 -6.3 0.4 3.4 63 63 A N B +C 71 0B 18 8,-1.0 8,-0.9 1,-0.1 3,-0.3 -0.900 53.0 165.2-137.9 107.0 -6.9 2.7 0.5 64 64 A K + 0 0 101 -2,-0.4 6,-0.1 6,-0.2 -1,-0.1 -0.097 30.9 133.4-109.5 32.9 -5.9 1.7 -3.1 65 65 A D + 0 0 57 -53,-0.1 -1,-0.2 1,-0.1 5,-0.1 0.836 63.6 68.2 -50.6 -35.3 -7.9 4.4 -4.8 66 66 A D S S- 0 0 56 3,-0.6 17,-0.1 -3,-0.3 -1,-0.1 -0.796 73.0-153.7 -94.0 120.3 -4.8 5.1 -6.9 67 67 A P S S+ 0 0 93 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.437 99.2 41.4 -69.8 2.3 -4.0 2.3 -9.4 68 68 A D S S+ 0 0 90 1,-0.3 15,-2.8 14,-0.0 16,-0.4 0.681 119.5 35.2-116.6 -38.0 -0.4 3.5 -9.2 69 69 A W E -D 82 0C 85 13,-0.3 -3,-0.6 14,-0.2 -1,-0.3 -0.964 65.2-170.6-124.9 139.9 0.1 4.3 -5.5 70 70 A W E -D 81 0C 36 11,-2.9 11,-2.1 -2,-0.4 2,-0.4 -0.804 15.8-132.6-124.1 166.0 -1.4 2.5 -2.4 71 71 A Q B +C 63 0B 55 -8,-0.9 -9,-3.2 -2,-0.3 -8,-1.0 -0.978 31.2 159.7-124.5 128.4 -1.5 3.1 1.3 72 72 A G - 0 0 1 -2,-0.4 7,-1.1 -11,-0.3 2,-0.3 -0.750 29.0-119.1-134.9-177.7 -0.7 0.6 4.0 73 73 A E B -E 78 0D 29 -2,-0.2 -13,-1.0 5,-0.2 2,-0.3 -0.910 15.1-172.5-127.7 154.9 0.3 0.3 7.7 74 74 A I S S- 0 0 8 3,-1.8 -15,-0.1 -2,-0.3 3,-0.1 -0.809 74.7 -27.1-151.5 105.0 3.3 -1.1 9.5 75 75 A N S S- 0 0 151 -2,-0.3 3,-0.1 1,-0.2 -16,-0.0 0.893 130.7 -42.2 57.9 41.8 3.5 -1.5 13.3 76 76 A G S S+ 0 0 76 1,-0.2 2,-0.5 0, 0.0 -1,-0.2 0.725 114.4 126.2 78.1 21.9 1.0 1.4 13.7 77 77 A V - 0 0 66 -3,-0.1 -3,-1.8 -26,-0.0 2,-0.4 -0.960 38.4-170.2-118.9 124.6 2.8 3.4 11.0 78 78 A T B +E 73 0D 96 -2,-0.5 2,-0.2 -5,-0.2 -5,-0.2 -0.894 23.4 125.7-114.5 142.6 0.9 4.9 8.1 79 79 A G - 0 0 10 -7,-1.1 2,-0.4 -2,-0.4 -29,-0.2 -0.664 52.0 -72.9-158.5-145.6 2.4 6.5 5.0 80 80 A L + 0 0 64 -2,-0.2 -29,-1.4 -9,-0.1 -9,-0.2 -0.996 42.4 160.6-140.1 132.4 2.4 6.4 1.2 81 81 A F E -D 70 0C 0 -11,-2.1 -11,-2.9 -2,-0.4 2,-0.1 -0.990 40.7 -94.3-149.1 154.4 4.0 3.9 -1.2 82 82 A P E > -D 69 0C 9 0, 0.0 3,-1.5 0, 0.0 -13,-0.3 -0.385 25.5-130.8 -69.8 144.4 3.7 2.8 -4.9 83 83 A S T 3 S+ 0 0 13 -15,-2.8 3,-0.3 1,-0.3 -14,-0.2 0.368 105.5 67.5 -76.2 6.8 1.5 -0.2 -5.7 84 84 A N T 3 S+ 0 0 106 -16,-0.4 -1,-0.3 1,-0.2 -15,-0.1 0.504 88.0 63.6-101.9 -9.1 4.4 -1.6 -7.7 85 85 A Y S < S+ 0 0 96 -3,-1.5 -45,-1.5 -45,-0.1 -44,-0.5 -0.026 100.6 59.8-104.1 28.7 6.6 -2.2 -4.6 86 86 A V E -B 39 0A 9 -3,-0.3 2,-0.5 -47,-0.3 -47,-0.2 -0.989 63.1-150.8-155.7 146.3 4.2 -4.8 -3.2 87 87 A K E -B 38 0A 143 -49,-2.2 -49,-1.2 -2,-0.3 -3,-0.1 -0.971 38.3-102.2-125.3 119.4 2.8 -8.2 -4.2 88 88 A M E -B 37 0A 109 -2,-0.5 -51,-0.3 -51,-0.2 -2,-0.0 -0.071 28.1-153.0 -38.2 115.1 -0.6 -9.3 -3.0 89 89 A T - 0 0 47 -53,-1.5 -1,-0.2 1,-0.1 3,-0.2 0.902 10.6-157.6 -62.1 -42.5 0.2 -11.8 -0.2 90 90 A T - 0 0 116 -54,-0.7 -53,-0.1 1,-0.2 -1,-0.1 0.868 12.0-152.9 64.8 37.3 -3.0 -13.7 -0.8 91 91 A D - 0 0 105 -55,-0.2 -1,-0.2 1,-0.1 2,-0.2 -0.183 13.4-128.8 -45.4 115.8 -2.9 -15.1 2.8 92 92 A S - 0 0 108 -3,-0.2 2,-1.0 1,-0.1 -1,-0.1 -0.485 8.6-137.8 -73.4 138.5 -4.8 -18.4 2.6 93 93 A S S S+ 0 0 124 -2,-0.2 -1,-0.1 2,-0.0 -2,-0.0 -0.736 72.8 7.1-100.2 86.6 -7.5 -18.9 5.1 94 94 A G S S- 0 0 49 -2,-1.0 3,-0.1 3,-0.0 -2,-0.0 -0.207 89.6 -72.7 120.8 147.9 -7.1 -22.6 6.3 95 95 A P - 0 0 128 0, 0.0 3,-0.1 0, 0.0 -2,-0.0 -0.279 62.3 -82.4 -69.7 156.2 -4.7 -25.5 5.8 96 96 A S - 0 0 114 1,-0.2 2,-0.5 -2,-0.0 -2,-0.0 -0.055 59.7 -81.7 -54.2 159.7 -4.5 -27.4 2.5 97 97 A S 0 0 136 -3,-0.1 -1,-0.2 0, 0.0 -3,-0.0 -0.540 360.0 360.0 -70.2 115.0 -7.1 -30.2 1.9 98 98 A G 0 0 126 -2,-0.5 0, 0.0 -3,-0.1 0, 0.0 -0.666 360.0 360.0-177.1 360.0 -5.9 -33.3 3.7