==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 11-JUN-03 1UG0 . COMPND 2 MOLECULE: SPLICING FACTOR 4; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR F.HE,Y.MUTO,R.USHIKOSHI,S.KOSHIBA,M.SHIROUZU,T.TERADA, . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6674.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 65.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 18 20.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 40.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 2,-0.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 127.1 -6.4 9.3 -27.6 2 2 A S + 0 0 131 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.594 360.0 91.4-113.3 67.4 -7.1 6.0 -25.8 3 3 A S + 0 0 115 -2,-0.5 2,-0.4 2,-0.0 0, 0.0 -0.835 41.3 169.0-163.1 119.8 -7.1 7.2 -22.2 4 4 A G - 0 0 83 -2,-0.3 2,-0.5 2,-0.0 -2,-0.0 -1.000 11.8-169.3-138.5 136.2 -9.9 8.4 -19.9 5 5 A S + 0 0 120 -2,-0.4 2,-0.5 0, 0.0 -2,-0.0 -0.938 10.9 174.7-129.3 108.5 -10.1 9.1 -16.2 6 6 A S + 0 0 117 -2,-0.5 2,-0.1 2,-0.0 -2,-0.0 -0.963 48.5 20.5-117.9 125.5 -13.4 9.7 -14.6 7 7 A G - 0 0 56 -2,-0.5 0, 0.0 2,-0.0 0, 0.0 -0.275 42.8-169.9 107.8 165.4 -13.8 10.1 -10.9 8 8 A E S > S+ 0 0 149 -2,-0.1 3,-2.9 0, 0.0 4,-0.1 0.244 80.7 53.9-152.3 -67.8 -11.5 10.9 -8.0 9 9 A E T >> S+ 0 0 131 1,-0.3 3,-3.3 2,-0.2 4,-0.6 0.737 88.5 87.1 -52.8 -23.1 -13.0 10.4 -4.5 10 10 A D H >> + 0 0 64 1,-0.3 3,-0.9 2,-0.2 4,-0.7 0.750 65.3 85.2 -48.8 -24.2 -13.7 6.9 -5.8 11 11 A Y H <> S+ 0 0 36 -3,-2.9 4,-0.6 1,-0.3 3,-0.3 0.792 94.0 42.0 -48.5 -31.3 -10.2 6.3 -4.5 12 12 A E H <> S+ 0 0 86 -3,-3.3 4,-0.8 1,-0.2 -1,-0.3 0.687 97.0 75.6 -88.7 -22.5 -11.8 5.7 -1.2 13 13 A Q H << S+ 0 0 88 -3,-0.9 -2,-0.2 -4,-0.6 -1,-0.2 0.617 96.0 53.1 -63.6 -11.7 -14.7 3.7 -2.7 14 14 A W H >< S+ 0 0 118 -4,-0.7 3,-3.4 -3,-0.3 -1,-0.2 0.858 93.3 65.9 -88.8 -43.7 -12.1 1.0 -3.0 15 15 A L H 3< S+ 0 0 37 -4,-0.6 -2,-0.2 1,-0.3 3,-0.2 0.754 91.6 69.2 -49.0 -24.6 -11.0 1.1 0.7 16 16 A E T 3< S+ 0 0 148 -4,-0.8 2,-0.8 1,-0.2 -1,-0.3 0.822 97.9 52.4 -64.0 -32.5 -14.6 -0.2 1.2 17 17 A I S < S- 0 0 85 -3,-3.4 -1,-0.2 -4,-0.2 2,-0.1 -0.851 80.1-174.8-110.4 94.8 -13.6 -3.4 -0.4 18 18 A K - 0 0 94 -2,-0.8 2,-0.2 -3,-0.2 -2,-0.0 -0.272 28.7 -96.8 -81.3 171.5 -10.5 -4.7 1.4 19 19 A V - 0 0 20 2,-0.1 5,-0.2 49,-0.1 -1,-0.1 -0.497 54.0 -72.0 -88.3 159.9 -8.5 -7.8 0.4 20 20 A S S S+ 0 0 92 -2,-0.2 48,-0.1 2,-0.1 52,-0.1 -0.815 103.8 38.9-110.5 150.6 -8.9 -11.2 1.9 21 21 A P S > S- 0 0 43 0, 0.0 3,-1.4 0, 0.0 -2,-0.1 0.625 74.6-138.9 -74.9 174.4 -8.4 -12.6 4.2 22 22 A P G > S+ 0 0 111 0, 0.0 3,-1.0 0, 0.0 -2,-0.1 0.391 93.1 86.3 -75.0 4.3 -9.3 -9.7 6.6 23 23 A E G > + 0 0 139 1,-0.2 3,-2.8 2,-0.1 4,-0.3 0.627 61.7 87.6 -77.6 -14.5 -6.2 -10.8 8.6 24 24 A G G X> + 0 0 17 -3,-1.4 4,-2.0 1,-0.3 3,-1.5 0.709 66.1 82.9 -56.4 -20.4 -4.1 -8.6 6.3 25 25 A A H <> S+ 0 0 47 -3,-1.0 4,-0.7 1,-0.3 -1,-0.3 0.740 81.9 64.1 -56.0 -22.5 -4.9 -5.9 8.8 26 26 A E H <4 S+ 0 0 156 -3,-2.8 -1,-0.3 1,-0.2 3,-0.2 0.859 111.5 32.7 -69.4 -37.1 -2.0 -7.4 10.7 27 27 A T H X> S+ 0 0 38 -3,-1.5 4,-3.6 -4,-0.3 3,-2.5 0.591 96.0 91.3 -93.0 -15.0 0.4 -6.5 7.9 28 28 A R H 3X S+ 0 0 73 -4,-2.0 4,-3.6 1,-0.3 5,-0.4 0.879 80.5 59.8 -45.1 -46.2 -1.6 -3.3 7.0 29 29 A R H 3< S+ 0 0 189 -4,-0.7 -1,-0.3 1,-0.2 4,-0.2 0.797 115.9 34.8 -53.8 -30.1 0.6 -1.4 9.5 30 30 A V H <> S+ 0 0 63 -3,-2.5 4,-1.4 2,-0.1 -2,-0.3 0.834 117.5 52.4 -91.3 -41.1 3.5 -2.6 7.3 31 31 A I H >X S+ 0 0 2 -4,-3.6 4,-1.8 1,-0.2 3,-1.0 0.970 105.4 53.6 -58.3 -57.9 1.6 -2.4 4.0 32 32 A E H 3X S+ 0 0 62 -4,-3.6 4,-3.1 1,-0.3 -1,-0.2 0.787 103.4 61.8 -47.3 -30.2 0.5 1.2 4.5 33 33 A K H 3> S+ 0 0 106 -5,-0.4 4,-1.0 2,-0.2 -1,-0.3 0.938 105.4 44.0 -62.6 -48.9 4.1 1.9 5.1 34 34 A L H XX S+ 0 0 0 -4,-1.4 4,-2.1 -3,-1.0 3,-1.5 0.984 116.7 44.5 -58.8 -62.6 5.0 0.8 1.6 35 35 A A H >X>S+ 0 0 1 -4,-1.8 4,-1.2 1,-0.3 5,-1.0 0.929 113.2 51.1 -46.3 -55.9 2.1 2.7 -0.1 36 36 A R H 3<5S+ 0 0 158 -4,-3.1 -1,-0.3 1,-0.3 -2,-0.2 0.743 116.0 44.0 -54.9 -23.6 2.8 5.7 2.1 37 37 A F H S+ 0 0 83 0, 0.0 4,-1.6 0, 0.0 5,-0.2 0.798 121.6 72.7 -74.9 -30.8 7.5 4.1 -8.6 44 44 A E H > S+ 0 0 132 1,-0.2 4,-1.5 2,-0.2 5,-0.1 0.839 100.2 47.2 -51.3 -36.3 11.1 4.8 -7.8 45 45 A L H > S+ 0 0 35 -3,-0.4 4,-4.3 2,-0.2 3,-0.4 0.959 105.0 56.0 -70.4 -53.5 10.2 3.8 -4.2 46 46 A E H X S+ 0 0 44 -4,-1.1 4,-0.8 1,-0.3 -1,-0.2 0.740 111.3 48.7 -50.3 -23.8 8.4 0.6 -5.3 47 47 A K H < S+ 0 0 121 -4,-1.6 4,-0.3 2,-0.2 -1,-0.3 0.844 113.7 43.3 -84.3 -38.8 11.7 -0.2 -7.0 48 48 A V H >X S+ 0 0 67 -4,-1.5 4,-3.1 -3,-0.4 3,-1.6 0.862 107.4 60.9 -73.4 -37.6 13.8 0.6 -3.9 49 49 A A H 3X S+ 0 0 0 -4,-4.3 4,-2.6 1,-0.3 -1,-0.2 0.891 97.3 59.2 -55.1 -42.4 11.3 -1.2 -1.7 50 50 A M H 3< S+ 0 0 60 -4,-0.8 -1,-0.3 -5,-0.3 -2,-0.2 0.734 113.5 39.1 -58.9 -23.0 12.1 -4.4 -3.7 51 51 A E H X4 S+ 0 0 125 -3,-1.6 3,-1.8 -4,-0.3 4,-0.3 0.824 108.3 59.6 -93.8 -40.9 15.7 -3.9 -2.6 52 52 A D H 3< S+ 0 0 89 -4,-3.1 3,-0.3 1,-0.3 -2,-0.2 0.912 123.6 25.0 -53.2 -46.6 15.0 -2.7 0.9 53 53 A Y T >< S+ 0 0 41 -4,-2.6 3,-1.1 1,-0.2 -1,-0.3 -0.041 81.5 136.4-108.4 28.4 13.3 -6.0 1.6 54 54 A K T < S+ 0 0 116 -3,-1.8 2,-0.5 1,-0.3 -1,-0.2 0.864 84.8 31.7 -40.2 -46.3 15.2 -7.9 -1.1 55 55 A D T 3 S+ 0 0 149 -4,-0.3 -1,-0.3 -3,-0.3 5,-0.1 -0.674 90.7 127.5-117.0 74.0 15.5 -10.6 1.5 56 56 A N < - 0 0 61 -3,-1.1 -3,-0.1 -2,-0.5 -4,-0.0 -0.976 44.9-161.4-135.1 119.1 12.4 -10.3 3.6 57 57 A P S S+ 0 0 120 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.447 97.8 52.5 -75.0 0.1 10.0 -13.2 4.3 58 58 A A S S+ 0 0 51 1,-0.1 3,-0.5 -5,-0.1 -5,-0.0 0.814 107.2 46.1 -99.7 -45.5 7.4 -10.6 5.2 59 59 A F S >> S+ 0 0 9 1,-0.2 3,-1.2 -6,-0.1 4,-0.6 -0.011 72.9 123.9 -88.0 29.3 7.6 -8.4 2.1 60 60 A T H 3> + 0 0 67 1,-0.3 4,-1.2 2,-0.2 -1,-0.2 0.628 64.8 68.3 -63.5 -12.7 7.5 -11.6 -0.0 61 61 A F H 34 S+ 0 0 0 -3,-0.5 -1,-0.3 2,-0.2 6,-0.2 0.857 82.9 71.5 -74.1 -37.7 4.4 -9.9 -1.6 62 62 A L H <4 S+ 0 0 3 -3,-1.2 -2,-0.2 1,-0.2 -1,-0.1 0.926 106.2 35.0 -40.2 -71.4 6.5 -7.2 -3.2 63 63 A H H < S+ 0 0 89 -4,-0.6 -2,-0.2 -13,-0.1 -1,-0.2 0.965 107.1 75.9 -47.9 -72.0 8.0 -9.5 -5.8 64 64 A D < - 0 0 81 -4,-1.2 3,-0.1 1,-0.1 0, 0.0 0.029 65.0-159.9 -40.4 150.3 5.0 -11.7 -6.3 65 65 A K S S+ 0 0 147 1,-0.1 -1,-0.1 6,-0.0 -3,-0.1 -0.170 81.3 54.8-130.4 37.3 2.3 -10.1 -8.3 66 66 A N S S+ 0 0 129 -5,-0.2 2,-0.4 0, 0.0 -1,-0.1 -0.027 75.0 118.7-160.0 35.8 -0.7 -12.2 -7.2 67 67 A S >> - 0 0 21 -6,-0.2 3,-1.6 -3,-0.1 4,-1.1 -0.939 67.3-129.9-115.0 132.2 -0.7 -11.9 -3.5 68 68 A R H 3> S+ 0 0 117 -2,-0.4 4,-2.9 1,-0.3 3,-0.5 0.792 112.3 61.1 -44.6 -31.8 -3.6 -10.4 -1.5 69 69 A E H 3> S+ 0 0 24 1,-0.3 4,-2.1 2,-0.2 -1,-0.3 0.910 99.7 51.6 -63.2 -44.5 -0.9 -8.4 0.1 70 70 A F H <4 S+ 0 0 27 -3,-1.6 4,-0.4 1,-0.2 -1,-0.3 0.664 113.0 48.9 -66.4 -16.4 0.1 -6.8 -3.2 71 71 A L H >X S+ 0 0 79 -4,-1.1 4,-2.4 -3,-0.5 3,-1.2 0.917 108.4 48.1 -86.8 -53.7 -3.6 -6.0 -3.6 72 72 A Y H 3X S+ 0 0 15 -4,-2.9 4,-1.4 1,-0.3 5,-0.2 0.823 107.3 59.8 -55.8 -33.6 -4.3 -4.4 -0.2 73 73 A Y H 3X S+ 0 0 11 -4,-2.1 4,-1.4 -5,-0.2 -1,-0.3 0.816 110.0 41.4 -64.6 -32.0 -1.2 -2.3 -0.7 74 74 A R H <> S+ 0 0 156 -3,-1.2 4,-1.7 -4,-0.4 -2,-0.2 0.817 107.9 59.7 -83.6 -34.9 -2.7 -0.9 -3.8 75 75 A R H < S+ 0 0 65 -4,-2.4 -2,-0.2 1,-0.2 4,-0.2 0.782 114.3 38.5 -63.1 -27.8 -6.2 -0.5 -2.3 76 76 A K H >X S+ 0 0 33 -4,-1.4 4,-2.0 -5,-0.2 3,-1.9 0.817 104.0 67.6 -89.7 -37.7 -4.5 1.8 0.3 77 77 A V H 3X S+ 0 0 16 -4,-1.4 4,-3.6 1,-0.3 -2,-0.2 0.868 96.3 57.5 -48.9 -40.8 -2.2 3.5 -2.2 78 78 A A H 3X S+ 0 0 28 -4,-1.7 4,-1.6 2,-0.2 -1,-0.3 0.806 108.0 49.3 -60.6 -29.8 -5.3 5.0 -3.7 79 79 A E H <> S+ 0 0 50 -3,-1.9 4,-1.3 -4,-0.2 -2,-0.2 0.981 117.0 35.8 -72.5 -61.6 -6.0 6.4 -0.2 80 80 A I H < S+ 0 0 22 -4,-2.0 -2,-0.2 1,-0.2 -3,-0.2 0.851 111.9 66.3 -60.2 -35.5 -2.6 7.9 0.5 81 81 A R H < S+ 0 0 167 -4,-3.6 3,-0.4 -5,-0.4 -1,-0.2 0.952 96.7 51.9 -49.4 -60.7 -2.4 8.8 -3.2 82 82 A K H < S+ 0 0 100 -4,-1.6 2,-0.5 1,-0.3 -1,-0.2 0.912 130.0 17.2 -41.2 -58.4 -5.2 11.3 -3.0 83 83 A S S < S+ 0 0 83 -4,-1.3 -1,-0.3 1,-0.1 3,-0.1 -0.924 84.9 122.2-125.0 105.1 -3.5 13.0 -0.1 84 84 A G + 0 0 36 -2,-0.5 -44,-0.1 -3,-0.4 -3,-0.1 0.569 63.2 28.5-120.0 -86.3 0.2 12.2 0.4 85 85 A P - 0 0 78 0, 0.0 -1,-0.3 0, 0.0 2,-0.3 -0.099 64.9-137.9 -74.9 178.1 2.7 15.1 0.4 86 86 A S S S+ 0 0 126 -3,-0.1 -3,-0.0 2,-0.0 0, 0.0 -0.732 74.2 57.8-144.6 89.6 2.0 18.6 1.4 87 87 A S 0 0 116 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.022 360.0 360.0-169.2 -71.2 3.5 21.3 -0.8 88 88 A G 0 0 120 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.394 360.0 360.0 -62.9 360.0 2.5 21.3 -4.5