==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 12-AUG-03 1UJY . COMPND 2 MOLECULE: RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 6; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR F.HE,Y.MUTO,H.UDA,S.KOSHIBA,M.SHIROUZU,T.TERADA,T.KIGAWA, . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5840.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 52.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 23.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 15.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 129 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-177.1 24.8 -15.5 6.8 2 2 A S - 0 0 121 2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.387 360.0-178.9-145.2 -58.7 21.8 -13.4 5.7 3 3 A S - 0 0 120 2,-0.0 0, 0.0 3,-0.0 0, 0.0 0.921 24.9-148.9 41.2 87.1 19.1 -15.5 4.0 4 4 A G - 0 0 73 1,-0.1 2,-0.2 0, 0.0 -2,-0.0 0.412 18.9-100.0 -60.8-153.8 16.6 -12.8 3.1 5 5 A S - 0 0 120 2,-0.0 2,-0.8 0, 0.0 3,-0.3 -0.666 34.1-172.2-141.1 80.9 12.9 -13.3 3.0 6 6 A S + 0 0 134 -2,-0.2 3,-0.0 1,-0.2 -3,-0.0 -0.668 54.7 79.0 -79.3 110.4 11.6 -13.9 -0.5 7 7 A G S S- 0 0 66 -2,-0.8 2,-0.3 0, 0.0 -1,-0.2 -0.072 94.4 -20.4-167.1 -80.4 7.8 -13.9 -0.3 8 8 A S - 0 0 92 -3,-0.3 30,-0.0 2,-0.1 -2,-0.0 -0.929 31.5-169.1-157.0 128.3 5.8 -10.7 -0.1 9 9 A H + 0 0 101 -2,-0.3 28,-0.1 29,-0.1 65,-0.1 0.105 35.3 161.7-102.0 18.7 6.8 -7.2 1.0 10 10 A Q - 0 0 94 1,-0.1 2,-0.5 26,-0.1 28,-0.2 -0.049 35.0-133.5 -41.3 137.1 3.1 -6.2 1.1 11 11 A L E -A 37 0A 5 26,-1.8 26,-3.0 58,-0.0 2,-0.7 -0.889 8.9-146.0-104.0 124.3 2.7 -3.0 3.1 12 12 A I E +A 36 0A 37 -2,-0.5 53,-2.3 24,-0.2 54,-1.5 -0.808 29.4 164.6 -92.7 112.6 -0.2 -3.0 5.6 13 13 A V E -AB 35 64A 3 22,-2.6 22,-4.1 -2,-0.7 2,-0.3 -0.996 28.0-138.8-132.3 134.9 -1.7 0.5 5.9 14 14 A K E - B 0 63A 73 49,-1.0 49,-2.7 -2,-0.4 20,-0.2 -0.695 29.6-106.3 -92.9 144.3 -5.0 1.5 7.4 15 15 A A - 0 0 8 18,-0.4 17,-0.3 -2,-0.3 48,-0.3 -0.059 19.3-147.9 -60.1 168.0 -7.2 4.1 5.8 16 16 A R - 0 0 167 1,-0.4 2,-0.2 46,-0.1 -1,-0.1 0.827 62.7 -27.7-104.0 -58.4 -7.4 7.6 7.3 17 17 A F S S- 0 0 95 14,-0.1 2,-0.7 12,-0.1 -1,-0.4 -0.823 93.2 -41.1-147.8-175.0 -10.9 8.8 6.5 18 18 A N - 0 0 106 -2,-0.2 2,-0.6 -3,-0.1 12,-0.3 -0.413 62.4-178.9 -59.5 103.6 -13.8 8.5 4.1 19 19 A F B -E 29 0B 30 10,-2.5 10,-1.0 -2,-0.7 2,-0.3 -0.939 12.0-157.0-115.0 113.9 -12.0 8.4 0.8 20 20 A K - 0 0 190 -2,-0.6 2,-0.3 8,-0.2 7,-0.1 -0.678 19.3-121.9 -89.5 141.0 -14.0 8.2 -2.4 21 21 A Q - 0 0 37 -2,-0.3 7,-0.1 1,-0.1 3,-0.1 -0.632 5.1-148.4 -84.2 138.4 -12.4 6.8 -5.6 22 22 A T S S+ 0 0 96 -2,-0.3 2,-0.3 1,-0.2 -1,-0.1 0.757 83.1 0.2 -74.3 -26.0 -12.4 9.1 -8.6 23 23 A N S > S- 0 0 107 4,-0.2 3,-1.0 1,-0.0 -1,-0.2 -0.977 73.0-107.9-158.0 160.6 -12.6 6.0 -10.8 24 24 A E T 3 S+ 0 0 171 -2,-0.3 30,-0.2 1,-0.3 4,-0.1 0.754 115.6 68.3 -63.3 -24.6 -12.8 2.2 -10.6 25 25 A D T 3 S+ 0 0 140 30,-0.1 -1,-0.3 2,-0.1 31,-0.2 0.866 99.7 57.8 -62.0 -37.3 -9.3 2.1 -11.8 26 26 A E S < S- 0 0 37 -3,-1.0 28,-0.2 29,-0.2 31,-0.1 -0.254 95.4 -98.5 -86.5 177.3 -8.2 3.7 -8.5 27 27 A L - 0 0 0 29,-2.6 2,-0.3 26,-0.1 -4,-0.2 -0.416 27.1-149.6 -92.3 170.9 -8.8 2.3 -5.0 28 28 A S + 0 0 23 -2,-0.1 2,-0.3 -7,-0.1 -8,-0.2 -0.949 16.7 172.6-148.2 122.6 -11.5 3.3 -2.6 29 29 A V B +E 19 0B 6 -10,-1.0 -10,-2.5 -2,-0.3 -12,-0.1 -0.924 12.0 176.4-129.6 154.1 -11.3 3.3 1.2 30 30 A C - 0 0 70 -2,-0.3 2,-0.3 -12,-0.3 -1,-0.1 0.644 61.2 -38.0-116.3 -79.7 -13.6 4.6 3.9 31 31 A K S S+ 0 0 138 1,-0.2 -1,-0.2 -13,-0.1 -15,-0.1 -0.979 113.2 12.1-156.8 144.7 -12.5 3.9 7.4 32 32 A G S S+ 0 0 54 -2,-0.3 2,-0.3 -17,-0.3 -1,-0.2 0.962 79.6 137.9 50.5 64.4 -10.7 1.0 9.2 33 33 A D - 0 0 33 -3,-0.1 -18,-0.4 2,-0.0 -1,-0.2 -0.766 47.0-143.5-142.8 91.6 -9.7 -0.8 6.1 34 34 A I - 0 0 26 -2,-0.3 17,-0.5 -20,-0.2 2,-0.3 -0.323 21.0-158.1 -56.6 129.0 -6.2 -2.2 6.1 35 35 A I E -A 13 0A 0 -22,-4.1 -22,-2.6 15,-0.1 2,-0.7 -0.860 11.5-133.8-114.1 148.4 -4.7 -1.9 2.6 36 36 A Y E -AC 12 49A 96 13,-3.6 13,-1.5 -2,-0.3 2,-0.6 -0.896 15.1-151.1-106.2 111.5 -1.9 -3.9 1.1 37 37 A V E +AC 11 48A 1 -26,-3.0 -26,-1.8 -2,-0.7 11,-0.3 -0.712 28.6 158.4 -83.8 120.3 0.7 -1.8 -0.7 38 38 A T S S+ 0 0 93 9,-1.8 10,-0.2 -2,-0.6 -1,-0.2 0.769 73.7 38.0-106.7 -44.3 2.3 -3.8 -3.5 39 39 A R S S- 0 0 139 8,-2.1 9,-0.1 2,-0.0 -2,-0.1 0.995 76.4-169.5 -70.8 -72.8 3.7 -1.1 -5.8 40 40 A V - 0 0 49 7,-0.5 2,-0.3 1,-0.1 6,-0.1 0.979 11.1-172.4 75.4 77.8 4.9 1.5 -3.4 41 41 A E - 0 0 97 4,-0.5 -1,-0.1 1,-0.1 3,-0.1 -0.742 27.6-155.1-103.5 151.4 5.6 4.5 -5.5 42 42 A E S S+ 0 0 198 -2,-0.3 -1,-0.1 1,-0.1 4,-0.1 0.437 79.4 90.0-100.1 -4.3 7.3 7.8 -4.4 43 43 A G S S- 0 0 75 2,-0.2 -1,-0.1 1,-0.1 3,-0.1 0.910 114.6 -88.7 -57.2 -46.2 5.6 9.7 -7.1 44 44 A G S S+ 0 0 48 1,-0.7 15,-0.4 -3,-0.1 16,-0.3 0.046 102.4 79.6 160.0 -30.8 2.7 10.5 -4.9 45 45 A W - 0 0 126 13,-0.1 -1,-0.7 14,-0.1 -4,-0.5 -0.674 60.7-151.2-100.8 156.8 0.2 7.7 -5.5 46 46 A W E - D 0 57A 36 11,-2.0 11,-2.1 -2,-0.3 2,-0.6 -0.994 5.0-148.3-133.0 125.4 0.5 4.2 -3.9 47 47 A E E + D 0 56A 50 -2,-0.4 -8,-2.1 9,-0.3 -9,-1.8 -0.838 39.1 131.6 -97.3 121.7 -0.9 1.1 -5.5 48 48 A G E -CD 37 55A 1 7,-1.9 7,-1.1 -2,-0.6 2,-0.4 -0.603 49.0 -97.5-143.0-157.5 -2.1 -1.6 -3.0 49 49 A T E -CD 36 54A 52 -13,-1.5 -13,-3.6 5,-0.2 5,-0.3 -0.995 25.5-163.3-142.4 133.0 -5.0 -3.9 -2.4 50 50 A L E > - D 0 53A 12 3,-1.4 3,-4.3 -2,-0.4 2,-0.7 -0.653 53.9 -58.5-110.0 167.6 -8.0 -3.5 -0.0 51 51 A N T 3 S- 0 0 129 -17,-0.5 3,-0.1 1,-0.3 -1,-0.1 -0.215 127.2 -22.8 -47.2 92.5 -10.5 -6.0 1.3 52 52 A G T 3 S+ 0 0 88 -2,-0.7 -1,-0.3 1,-0.3 2,-0.3 0.766 128.9 102.3 69.3 26.5 -11.7 -7.2 -2.1 53 53 A R E < +D 50 0A 106 -3,-4.3 -3,-1.4 2,-0.0 -1,-0.3 -0.880 44.6 177.9-135.7 166.7 -10.5 -3.9 -3.6 54 54 A T E +D 49 0A 77 -2,-0.3 2,-0.2 -5,-0.3 -5,-0.2 -0.962 25.0 89.0-160.2 170.5 -7.6 -2.5 -5.6 55 55 A G E S-D 48 0A 4 -7,-1.1 -7,-1.9 -2,-0.3 -29,-0.2 -0.767 70.0 -50.7 128.0-173.1 -6.2 0.6 -7.2 56 56 A W E +D 47 0A 60 -2,-0.2 -29,-2.6 -9,-0.2 -9,-0.3 -0.644 53.8 166.3 -98.8 157.7 -4.0 3.5 -6.4 57 57 A F E -D 46 0A 0 -11,-2.1 -11,-2.0 -2,-0.2 2,-0.6 -0.979 43.4 -82.2-165.1 161.0 -4.4 5.7 -3.4 58 58 A P > - 0 0 18 0, 0.0 4,-1.7 0, 0.0 -13,-0.1 -0.607 32.7-174.2 -75.0 116.5 -2.7 8.4 -1.2 59 59 A S T 4 S+ 0 0 30 -2,-0.6 -14,-0.1 -15,-0.4 -22,-0.0 0.889 83.0 61.6 -75.7 -42.2 -0.4 6.7 1.3 60 60 A N T 4 S+ 0 0 153 -16,-0.3 -1,-0.2 1,-0.2 4,-0.1 0.851 107.4 48.4 -51.5 -36.9 0.5 9.9 3.0 61 61 A Y T 4 S+ 0 0 129 2,-0.1 -2,-0.2 -44,-0.0 -1,-0.2 0.987 105.0 61.4 -67.4 -62.3 -3.2 10.1 3.9 62 62 A V S < S- 0 0 12 -4,-1.7 -47,-0.2 1,-0.1 2,-0.2 -0.215 90.2-113.9 -64.0 157.7 -3.7 6.6 5.1 63 63 A R E -B 14 0A 156 -49,-2.7 -49,-1.0 -48,-0.3 2,-0.4 -0.558 21.5-123.6 -93.8 159.6 -1.8 5.5 8.2 64 64 A E E +B 13 0A 31 -51,-0.3 -51,-0.2 -2,-0.2 -30,-0.0 -0.863 24.8 175.5-107.1 138.1 0.9 2.8 8.3 65 65 A I + 0 0 77 -53,-2.3 -52,-0.2 -2,-0.4 -1,-0.2 0.829 56.5 90.1-101.9 -54.0 0.8 -0.2 10.6 66 66 A K > - 0 0 86 -54,-1.5 4,-0.9 1,-0.2 -55,-0.0 -0.238 53.0-170.1 -49.4 122.9 3.8 -2.2 9.6 67 67 A S H > S+ 0 0 102 2,-0.2 4,-0.8 1,-0.2 -1,-0.2 0.570 85.8 56.6 -92.5 -13.2 6.6 -1.0 11.8 68 68 A S H 4 S+ 0 0 93 2,-0.1 -1,-0.2 1,-0.1 -2,-0.1 0.520 108.5 47.6 -92.9 -9.2 9.2 -2.9 9.7 69 69 A E H >4 S+ 0 0 16 2,-0.1 3,-0.6 -57,-0.1 -2,-0.2 0.746 102.3 61.8 -98.9 -33.2 8.1 -1.1 6.6 70 70 A R H 3< S+ 0 0 175 -4,-0.9 -2,-0.1 1,-0.3 -3,-0.1 0.964 116.9 29.9 -56.9 -57.5 8.1 2.4 8.0 71 71 A S T 3< S+ 0 0 123 -4,-0.8 -1,-0.3 1,-0.2 -2,-0.1 0.273 125.6 56.7 -85.9 10.4 11.8 2.4 8.8 72 72 A G < - 0 0 20 -3,-0.6 2,-2.8 4,-0.0 -1,-0.2 -0.681 63.7-171.1-145.9 86.2 12.2 0.0 5.8 73 73 A P - 0 0 91 0, 0.0 2,-2.8 0, 0.0 3,-0.4 -0.328 66.2 -86.1 -75.0 59.0 10.9 1.3 2.5 74 74 A S S S- 0 0 73 -2,-2.8 -34,-0.0 1,-0.2 0, 0.0 -0.418 89.9 -46.9 73.9 -69.1 11.5 -2.1 0.9 75 75 A S 0 0 111 -2,-2.8 -1,-0.2 0, 0.0 0, 0.0 0.236 360.0 360.0-158.2 -56.1 15.1 -1.4 0.1 76 76 A G 0 0 105 -3,-0.4 -4,-0.0 -4,-0.1 0, 0.0 -0.816 360.0 360.0 157.6 360.0 15.6 2.0 -1.5