==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 09-SEP-03 1UL4 . COMPND 2 MOLECULE: SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR K.YAMASAKI,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7664.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 34 42.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 9.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 9.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 9.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 51 A L 0 0 105 0, 0.0 2,-1.2 0, 0.0 12,-0.4 0.000 360.0 360.0 360.0 116.3 -7.5 24.3 0.9 2 52 A R + 0 0 193 1,-0.2 10,-0.1 10,-0.1 8,-0.0 -0.722 360.0 122.6 -94.2 89.0 -9.8 21.9 -0.9 3 53 A L + 0 0 68 -2,-1.2 2,-0.4 3,-0.0 -1,-0.2 0.074 31.4 128.9-133.0 21.6 -7.4 19.8 -3.0 4 54 A C - 0 0 23 1,-0.1 5,-0.2 2,-0.1 21,-0.2 -0.689 52.6-147.3 -85.2 128.5 -8.3 16.3 -1.7 5 55 A Q S S+ 0 0 94 19,-1.0 2,-0.2 -2,-0.4 -1,-0.1 0.859 77.1 93.9 -60.3 -35.9 -9.1 13.7 -4.4 6 56 A V S > S- 0 0 5 1,-0.1 3,-0.7 31,-0.1 -2,-0.1 -0.413 76.9-134.9 -62.7 124.4 -11.6 12.1 -2.0 7 57 A D T 3 S+ 0 0 108 1,-0.2 3,-0.1 -2,-0.2 29,-0.1 -0.378 83.5 28.7 -79.0 159.6 -15.1 13.5 -2.7 8 58 A R T 3 S+ 0 0 241 1,-0.2 2,-0.4 -2,-0.1 -1,-0.2 0.736 85.5 155.5 63.2 22.5 -17.5 14.6 0.1 9 59 A C < - 0 0 11 -3,-0.7 -1,-0.2 -5,-0.2 -5,-0.1 -0.671 26.8-179.9 -85.2 132.9 -14.4 15.4 2.2 10 60 A T + 0 0 139 -2,-0.4 2,-0.4 -3,-0.1 -1,-0.1 -0.025 37.4 127.7-120.3 28.6 -14.8 18.0 5.0 11 61 A A - 0 0 44 2,-0.0 2,-0.6 1,-0.0 -7,-0.1 -0.701 53.5-135.7 -90.1 137.3 -11.2 18.0 6.3 12 62 A D - 0 0 127 -2,-0.4 3,-0.3 1,-0.1 -10,-0.1 -0.825 19.0-177.7 -96.5 120.3 -9.4 21.3 6.7 13 63 A M > + 0 0 14 -2,-0.6 3,-0.7 -12,-0.4 -1,-0.1 -0.171 39.1 129.7-106.6 38.1 -5.8 21.3 5.4 14 64 A K T 3 S+ 0 0 161 1,-0.3 2,-0.3 0, 0.0 -1,-0.2 0.842 84.9 25.8 -59.5 -34.4 -5.0 24.9 6.4 15 65 A E T 3 S+ 0 0 190 -3,-0.3 -1,-0.3 2,-0.0 2,-0.2 -0.670 88.9 140.6-133.8 79.4 -1.9 23.7 8.2 16 66 A A < - 0 0 37 -3,-0.7 2,-0.1 -2,-0.3 10,-0.1 -0.696 48.9-100.3-115.8 169.2 -0.6 20.4 6.7 17 67 A K >> - 0 0 158 -2,-0.2 4,-2.8 1,-0.1 3,-0.9 -0.372 35.0-106.2 -84.6 166.4 2.8 19.0 5.9 18 68 A L H 3> S+ 0 0 143 1,-0.2 4,-1.2 2,-0.2 5,-0.3 0.691 120.6 60.3 -64.7 -18.0 4.5 19.0 2.5 19 69 A Y H 3> S+ 0 0 107 2,-0.2 4,-0.7 3,-0.2 -1,-0.2 0.784 114.8 31.9 -79.9 -28.9 3.8 15.2 2.4 20 70 A H H <4>S+ 0 0 28 -3,-0.9 5,-2.3 2,-0.1 4,-0.3 0.727 121.5 49.1 -97.6 -28.9 0.0 15.8 2.7 21 71 A R H <5S+ 0 0 125 -4,-2.8 -3,-0.2 3,-0.2 -2,-0.2 0.804 113.7 46.7 -80.1 -31.2 -0.1 19.1 0.8 22 72 A R H <5S+ 0 0 178 -4,-1.2 -3,-0.2 -5,-0.3 -2,-0.1 0.945 116.3 41.3 -75.2 -51.3 2.0 17.8 -2.1 23 73 A H T <5S- 0 0 37 -4,-0.7 -1,-0.2 -5,-0.3 -2,-0.2 0.573 108.9-125.9 -73.2 -8.7 0.1 14.5 -2.6 24 74 A K T 5 + 0 0 104 -4,-0.3 -19,-1.0 1,-0.2 2,-0.3 0.930 67.1 124.5 63.3 46.5 -3.1 16.4 -2.1 25 75 A V < - 0 0 0 -5,-2.3 2,-0.3 -21,-0.2 -1,-0.2 -0.934 59.1-116.4-135.7 158.8 -4.3 14.0 0.7 26 76 A C > - 0 0 5 -2,-0.3 4,-2.6 1,-0.1 5,-0.2 -0.687 19.6-127.7 -96.0 148.9 -5.4 14.3 4.3 27 77 A E H > S+ 0 0 129 -2,-0.3 4,-1.1 1,-0.2 -1,-0.1 0.836 114.8 49.5 -60.7 -32.7 -3.5 12.8 7.3 28 78 A V H 4 S+ 0 0 103 1,-0.2 -1,-0.2 2,-0.2 -3,-0.0 0.819 113.8 44.6 -75.5 -32.5 -6.8 11.1 8.3 29 79 A H H >4 S+ 0 0 32 1,-0.2 3,-0.9 2,-0.2 -2,-0.2 0.772 104.2 64.2 -81.5 -28.5 -7.4 9.8 4.8 30 80 A A H 3< S+ 0 0 9 -4,-2.6 -2,-0.2 1,-0.3 -1,-0.2 0.891 122.5 18.3 -62.0 -40.8 -3.8 8.6 4.4 31 81 A K T 3< S+ 0 0 126 -4,-1.1 -1,-0.3 -5,-0.2 -2,-0.2 -0.274 98.6 132.8-126.3 46.0 -4.2 6.1 7.3 32 82 A A < - 0 0 29 -3,-0.9 2,-1.1 1,-0.0 12,-0.2 -0.321 68.3 -99.2 -90.0 175.9 -8.0 5.8 7.5 33 83 A S S S- 0 0 110 1,-0.3 10,-0.1 -2,-0.1 -1,-0.0 -0.611 86.7 -49.9 -97.9 73.4 -10.2 2.7 7.7 34 84 A S - 0 0 43 -2,-1.1 -1,-0.3 -5,-0.1 9,-0.2 0.854 68.1-132.3 63.0 109.6 -11.3 2.5 4.0 35 85 A V E -A 42 0A 14 7,-1.8 7,-2.1 -3,-0.2 2,-1.3 -0.544 17.3-111.0 -90.8 157.6 -12.6 5.7 2.5 36 86 A F E +A 41 0A 147 -2,-0.2 2,-0.5 5,-0.2 5,-0.2 -0.701 49.2 164.4 -90.8 89.3 -15.8 6.1 0.5 37 87 A L E > S-A 40 0A 23 3,-1.5 3,-0.9 -2,-1.3 -31,-0.1 -0.930 70.2 -15.1-112.0 124.7 -14.5 6.8 -3.0 38 88 A S T 3 S- 0 0 105 -2,-0.5 -1,-0.2 1,-0.3 3,-0.1 0.716 121.3 -67.9 59.6 20.3 -16.8 6.5 -6.0 39 89 A G T 3 S+ 0 0 40 1,-0.3 -1,-0.3 -3,-0.0 2,-0.1 -0.119 118.6 95.8 93.4 -38.3 -19.2 4.6 -3.8 40 90 A L E < S-A 37 0A 74 -3,-0.9 -3,-1.5 -4,-0.1 2,-0.7 -0.323 87.9 -94.2 -82.0 167.8 -16.8 1.6 -3.5 41 91 A N E +A 36 0A 69 -5,-0.2 13,-1.9 -3,-0.1 2,-0.5 -0.752 47.2 175.5 -88.0 113.2 -14.3 1.0 -0.6 42 92 A Q E -AB 35 53A 35 -7,-2.1 -7,-1.8 -2,-0.7 11,-0.2 -0.974 6.6-170.2-123.3 123.8 -10.9 2.4 -1.6 43 93 A R E - B 0 52A 51 9,-1.6 9,-2.0 -2,-0.5 2,-0.2 -0.554 26.8 -98.3-105.1 171.6 -7.9 2.4 0.9 44 94 A F E - B 0 51A 8 -12,-0.2 2,-0.4 7,-0.2 7,-0.2 -0.515 22.4-148.8 -88.7 158.0 -4.5 4.1 0.7 45 95 A C >> - 0 0 0 5,-1.8 4,-2.8 -2,-0.2 3,-0.7 -0.829 10.3-172.8-131.6 94.5 -1.3 2.4 -0.4 46 96 A Q T 34 S+ 0 0 101 -2,-0.4 -1,-0.1 1,-0.2 17,-0.1 0.745 84.2 70.2 -55.6 -23.4 1.9 3.7 1.3 47 97 A Q T 34 S+ 0 0 76 1,-0.2 -1,-0.2 -3,-0.1 16,-0.0 0.958 121.9 9.4 -59.8 -54.1 3.8 1.4 -1.1 48 98 A C T <4 S- 0 0 62 -3,-0.7 -2,-0.2 2,-0.2 -1,-0.2 0.442 95.5-129.2-105.5 -4.7 3.0 3.5 -4.2 49 99 A S S < S+ 0 0 22 -4,-2.8 -3,-0.2 1,-0.2 2,-0.1 0.466 75.9 109.4 69.6 -1.0 1.5 6.4 -2.3 50 100 A R S S- 0 0 152 -5,-0.5 -5,-1.8 -6,-0.1 2,-0.5 -0.196 77.3 -91.6 -93.4-171.2 -1.5 6.1 -4.7 51 101 A F E -B 44 0A 30 -7,-0.2 2,-0.3 -3,-0.1 -7,-0.2 -0.912 40.6-178.3-110.0 129.0 -5.1 5.0 -4.1 52 102 A H E -B 43 0A 32 -9,-2.0 -9,-1.6 -2,-0.5 5,-0.0 -0.947 27.9-107.7-127.3 147.6 -6.1 1.3 -4.5 53 103 A D E > -B 42 0A 33 -2,-0.3 4,-0.7 -11,-0.2 3,-0.5 -0.114 28.6-115.5 -64.7 166.6 -9.4 -0.5 -4.2 54 104 A L T >4 S+ 0 0 65 -13,-1.9 3,-0.5 1,-0.2 -12,-0.1 0.818 112.5 66.4 -73.7 -31.9 -10.1 -2.9 -1.3 55 105 A Q T 34 S+ 0 0 165 -14,-0.3 -1,-0.2 1,-0.2 -13,-0.1 0.767 99.8 52.9 -60.3 -25.6 -10.4 -5.8 -3.7 56 106 A E T 34 S+ 0 0 75 -3,-0.5 -1,-0.2 2,-0.0 -2,-0.2 0.799 98.8 76.6 -79.8 -30.8 -6.7 -5.4 -4.4 57 107 A F << + 0 0 9 -4,-0.7 2,-0.3 -3,-0.5 5,-0.1 -0.516 59.5 152.6 -82.1 149.6 -5.8 -5.4 -0.7 58 108 A D + 0 0 128 3,-0.6 5,-0.4 5,-0.5 3,-0.1 -0.961 30.4 37.6-162.9 175.0 -5.7 -8.7 1.3 59 109 A E S S- 0 0 130 -2,-0.3 4,-0.0 1,-0.2 -1,-0.0 0.132 103.3 -58.8 60.5 176.2 -4.1 -10.5 4.2 60 110 A A S S+ 0 0 97 2,-0.1 2,-0.5 0, 0.0 -1,-0.2 0.816 119.9 84.6 -59.6 -31.1 -3.4 -8.9 7.5 61 111 A K - 0 0 120 1,-0.1 2,-0.8 -3,-0.1 -3,-0.6 -0.628 69.6-154.3 -78.4 124.0 -1.1 -6.5 5.6 62 112 A R + 0 0 136 -2,-0.5 2,-0.2 -5,-0.1 -1,-0.1 -0.348 59.6 103.2 -93.6 53.0 -3.0 -3.5 4.2 63 113 A S S S- 0 0 30 -2,-0.8 -5,-0.5 -5,-0.4 -18,-0.1 -0.735 79.6 -64.6-126.5 175.6 -0.5 -2.9 1.4 64 114 A C - 0 0 14 -2,-0.2 5,-0.2 1,-0.1 -1,-0.2 -0.062 37.2-130.2 -56.0 161.2 -0.2 -3.5 -2.3 65 115 A R S >>S+ 0 0 131 3,-0.2 4,-1.5 2,-0.1 5,-0.9 0.777 82.4 92.2 -85.3 -29.9 -0.0 -7.1 -3.6 66 116 A R T 45S- 0 0 143 1,-0.2 2,-2.5 2,-0.2 -2,-0.1 -0.474 108.1 -11.0 -69.7 132.3 3.1 -6.5 -5.8 67 117 A R T 45S+ 0 0 229 -2,-0.2 -1,-0.2 1,-0.2 -2,-0.1 -0.342 129.9 69.5 77.2 -59.5 6.3 -7.3 -4.0 68 118 A L T 45S+ 0 0 69 -2,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.956 109.2 31.7 -52.3 -58.5 4.6 -7.6 -0.6 69 119 A A T <5S- 0 0 57 -4,-1.5 -1,-0.2 -5,-0.2 -3,-0.2 0.979 109.9-126.6 -65.5 -58.4 2.8 -10.8 -1.5 70 120 A G < - 0 0 43 -5,-0.9 -4,-0.1 2,-0.1 -2,-0.1 0.520 20.4-155.0 108.1 107.8 5.5 -12.2 -3.9 71 121 A H - 0 0 144 3,-0.0 -5,-0.0 2,-0.0 -1,-0.0 0.777 36.3-157.7 -79.5 -28.1 5.0 -13.4 -7.4 72 122 A N - 0 0 140 1,-0.0 -2,-0.1 2,-0.0 0, 0.0 0.339 26.9 -91.1 63.9 156.7 8.0 -15.7 -7.3 73 123 A E + 0 0 184 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 1.000 66.2 149.9 -63.5 -71.6 9.9 -16.9 -10.3 74 124 A R - 0 0 206 2,-0.0 2,-0.3 1,-0.0 -2,-0.0 0.087 45.4 -92.5 60.2 179.9 8.0 -20.2 -11.1 75 125 A R + 0 0 223 1,-0.1 3,-0.1 3,-0.0 -1,-0.0 -0.900 35.2 170.0-130.2 159.0 7.7 -21.6 -14.6 76 126 A R + 0 0 246 1,-0.5 2,-0.2 -2,-0.3 -1,-0.1 0.578 67.7 28.7-130.6 -56.1 5.2 -21.3 -17.4 77 127 A K S S- 0 0 187 0, 0.0 -1,-0.5 0, 0.0 2,-0.3 -0.683 70.7-128.1-110.9 165.8 6.5 -22.8 -20.7 78 128 A S - 0 0 127 -2,-0.2 2,-0.3 -3,-0.1 -3,-0.0 -0.780 22.3-110.4-113.2 157.9 9.0 -25.6 -21.4 79 129 A S + 0 0 134 -2,-0.3 2,-0.2 1,-0.1 -1,-0.0 -0.664 63.3 99.5 -88.3 140.0 12.1 -25.7 -23.6 80 130 A G 0 0 75 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 -0.659 360.0 360.0-173.5-127.8 12.1 -27.8 -26.7 81 131 A E 0 0 257 -2,-0.2 -2,-0.1 0, 0.0 0, 0.0 0.376 360.0 360.0-137.8 360.0 11.6 -27.3 -30.5